The cardiac atlas project: Rationale, design and procedures

Carissa G. Fonseca; Michael Backhaus; Jae Do Chung; Wenchao Tao; Pau Medrano-Gracia; Brett R. Cowan; Peter J. Hunter; J. Paul Finn; Kalyanam Shivkumar; Joao A.C. Lima; David A. Bluemke; Alan H. Kadish; Daniel C. Lee; Alistair A. Young

doi:10.1007/978-3-642-15835-3_4

The cardiac atlas project: Rationale, design and procedures

Carissa G. Fonseca, Michael Backhaus, Jae Do Chung, Wenchao Tao, Pau Medrano-Gracia, Brett R. Cowan, Peter J. Hunter, J. Paul Finn, Kalyanam Shivkumar, Joao A.C. Lima, David A. Bluemke, Alan H. Kadish, Daniel C. Lee, Alistair A. Young

School of Medicine

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Abstract

The Cardiac Atlas Project (CAP) is a NIH sponsored international collaboration to establish a web-accessible structural and functional atlas of the normal and pathological heart as a resource for the clinical, research and educational communities. An initial goal of the atlas is to facilitate statistical analysis of regional heart shape and wall motion characteristics, and characterization of remodeling, between and within population groups. The two main early contributing studies are the Multi Ethnic Study of Atherosclerosis (MESA) and the Defibrillators to Reduce Risk by Magnetic Resonance Imaging Evaluation (DETERMINE) clinical trial. De-identified image and text data from 2864 asymptomatic volunteers from MESA, and 470 myocardial infarction cases from DETERMINE, are currently available in the CAP database. DICOM images were de-identified using HIPAA compliant software based on tools provided by the Center for Computational Biology at UCLA. Only those cases with informed consent and IRB approval compatible with the CAP were included. Researchers requesting permission to access CAP data can apply through the CAP website (www.cardiacatlas.org). All proposals for data access must be approved by the data contributors, and applicants must sign a data transfer agreement with each study from which data is requested. Software to visualize cardiac images and create 3D mathematical models, developed in the CAP, is available open-source from the website.

Original language	English (US)
Title of host publication	Statistical Atlases and Computational Models of the Heart - First Int. Workshop, STACOM 2010 and Cardiac Electrophysiological Simulation Challenge, CESC 2010 - Held in Conj. with MICCAI 2010, Proc.
Pages	36-45
Number of pages	10
DOIs	https://doi.org/10.1007/978-3-642-15835-3_4
State	Published - 2010
Event	1st International Workshop on Statistical Atlases and Computational Models of the Heart, STACOM 2010 and Cardiac Electrophysiological Simulation Challenge, CESC 2010 - Held in Conjunction with MICCAI 2010 - Beijing, China Duration: Sep 20 2010 → Sep 20 2010

Publication series

Name	Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume	6364 LNCS
ISSN (Print)	0302-9743
ISSN (Electronic)	1611-3349

Other

Other	1st International Workshop on Statistical Atlases and Computational Models of the Heart, STACOM 2010 and Cardiac Electrophysiological Simulation Challenge, CESC 2010 - Held in Conjunction with MICCAI 2010
Country/Territory	China
City	Beijing
Period	9/20/10 → 9/20/10

Keywords

Cardiac
Computational Atlas
Database
Mapping

ASJC Scopus subject areas

Theoretical Computer Science
General Computer Science

Access to Document

10.1007/978-3-642-15835-3_4

Cite this

Fonseca, C. G., Backhaus, M., Do Chung, J., Tao, W., Medrano-Gracia, P., Cowan, B. R., Hunter, P. J., Finn, J. P., Shivkumar, K., Lima, J. A. C., Bluemke, D. A., Kadish, A. H., Lee, D. C., & Young, A. A. (2010). The cardiac atlas project: Rationale, design and procedures. In Statistical Atlases and Computational Models of the Heart - First Int. Workshop, STACOM 2010 and Cardiac Electrophysiological Simulation Challenge, CESC 2010 - Held in Conj. with MICCAI 2010, Proc. (pp. 36-45). (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 6364 LNCS). https://doi.org/10.1007/978-3-642-15835-3_4

The cardiac atlas project: Rationale, design and procedures. / Fonseca, Carissa G.; Backhaus, Michael; Do Chung, Jae et al.
Statistical Atlases and Computational Models of the Heart - First Int. Workshop, STACOM 2010 and Cardiac Electrophysiological Simulation Challenge, CESC 2010 - Held in Conj. with MICCAI 2010, Proc.. 2010. p. 36-45 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 6364 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Fonseca, CG, Backhaus, M, Do Chung, J, Tao, W, Medrano-Gracia, P, Cowan, BR, Hunter, PJ, Finn, JP, Shivkumar, K, Lima, JAC, Bluemke, DA, Kadish, AH, Lee, DC & Young, AA 2010, The cardiac atlas project: Rationale, design and procedures. in Statistical Atlases and Computational Models of the Heart - First Int. Workshop, STACOM 2010 and Cardiac Electrophysiological Simulation Challenge, CESC 2010 - Held in Conj. with MICCAI 2010, Proc.. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 6364 LNCS, pp. 36-45, 1st International Workshop on Statistical Atlases and Computational Models of the Heart, STACOM 2010 and Cardiac Electrophysiological Simulation Challenge, CESC 2010 - Held in Conjunction with MICCAI 2010, Beijing, China, 9/20/10. https://doi.org/10.1007/978-3-642-15835-3_4

Fonseca CG, Backhaus M, Do Chung J, Tao W, Medrano-Gracia P, Cowan BR et al. The cardiac atlas project: Rationale, design and procedures. In Statistical Atlases and Computational Models of the Heart - First Int. Workshop, STACOM 2010 and Cardiac Electrophysiological Simulation Challenge, CESC 2010 - Held in Conj. with MICCAI 2010, Proc.. 2010. p. 36-45. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)). doi: 10.1007/978-3-642-15835-3_4

Fonseca, Carissa G. ; Backhaus, Michael ; Do Chung, Jae et al. / The cardiac atlas project : Rationale, design and procedures. Statistical Atlases and Computational Models of the Heart - First Int. Workshop, STACOM 2010 and Cardiac Electrophysiological Simulation Challenge, CESC 2010 - Held in Conj. with MICCAI 2010, Proc.. 2010. pp. 36-45 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)).

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abstract = "The Cardiac Atlas Project (CAP) is a NIH sponsored international collaboration to establish a web-accessible structural and functional atlas of the normal and pathological heart as a resource for the clinical, research and educational communities. An initial goal of the atlas is to facilitate statistical analysis of regional heart shape and wall motion characteristics, and characterization of remodeling, between and within population groups. The two main early contributing studies are the Multi Ethnic Study of Atherosclerosis (MESA) and the Defibrillators to Reduce Risk by Magnetic Resonance Imaging Evaluation (DETERMINE) clinical trial. De-identified image and text data from 2864 asymptomatic volunteers from MESA, and 470 myocardial infarction cases from DETERMINE, are currently available in the CAP database. DICOM images were de-identified using HIPAA compliant software based on tools provided by the Center for Computational Biology at UCLA. Only those cases with informed consent and IRB approval compatible with the CAP were included. Researchers requesting permission to access CAP data can apply through the CAP website (www.cardiacatlas.org). All proposals for data access must be approved by the data contributors, and applicants must sign a data transfer agreement with each study from which data is requested. Software to visualize cardiac images and create 3D mathematical models, developed in the CAP, is available open-source from the website.",

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The cardiac atlas project: Rationale, design and procedures

Abstract

Publication series

Other

Keywords

ASJC Scopus subject areas

Access to Document

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