Rapid and efficient in vitro excision of BAC sequences from herpesvirus genomes using Cre-mediated recombination

Peter Grzesik, Nathan Ko, Lauren M. Oldfield, Sanjay Vashee, Prashant Desai

Research output: Contribution to journalArticle

Abstract

Cre-mediated recombination is a widely used technique for the re-arrangement of DNA sequences that are bracketed by loxP recognition sites. This bacteriophage P1 enzyme is commonly used to excise the bacterial artificial chromosome (BAC) sequence, a vector sequence used for large herpesvirus genomes for the purposes of propagation and manipulation in Escherichia coli. Most methods utilize cell lines that can be induced for the expression of Cre enzyme to facilitate this excision. In addition, methods have been developed that express Cre from the virus genome and enable auto-excision of the BAC plasmid. We report a versatile and rapid in vitro method based on purified Cre enzyme to carry out the same process in a test tube and does not require cell line generation or cloning into the virus genome. This method greatly increases the repertoire of methods available to modify the genome prior to reconstitution of virus infectivity in a mammalian host.

Original languageEnglish (US)
Pages (from-to)67-70
Number of pages4
JournalJournal of Virological Methods
Volume261
DOIs
StatePublished - Nov 1 2018

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Bacterial Artificial Chromosomes
Herpesviridae
Genetic Recombination
Genome
Viruses
Enzymes
Bacteriophage P1
Cell Line
Organism Cloning
Plasmids
In Vitro Techniques
Escherichia coli

Keywords

  • BAC plasmid
  • Cre
  • HSV1
  • loxP

ASJC Scopus subject areas

  • Virology

Cite this

Rapid and efficient in vitro excision of BAC sequences from herpesvirus genomes using Cre-mediated recombination. / Grzesik, Peter; Ko, Nathan; Oldfield, Lauren M.; Vashee, Sanjay; Desai, Prashant.

In: Journal of Virological Methods, Vol. 261, 01.11.2018, p. 67-70.

Research output: Contribution to journalArticle

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