MR contrast synthesis for lesion segmentation

Snehashis Roy; Aaron Carass; Navid Shiee; Dzung Pham; Jerry L. Prince

doi:10.1109/ISBI.2010.5490140

MR contrast synthesis for lesion segmentation

Snehashis Roy, Aaron Carass, Navid Shiee, Dzung Pham, Jerry L. Prince

Whiting School of Engineering

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

40 Scopus citations

Abstract

The magnetic resonance contrast of a neuroimaging data set has strong impact on the utility of the data in image analysis tasks, such as registration and segmentation. Lengthy acquisition times often prevent routine acquisition of multiple MR contrast images, and opportunities for detailed analysis using these data would seem to be irrevocably lost. This paper describes an example based approach which uses patch matching from a multiple contrast atlas with the intended goal of generating an alternate MR contrast image, thus effectively simulating alternative pulse sequences from one another. In this paper, we deal specifically with Fluid Attenuated Inversion Recovery (FLAIR) sequence generation from T1 and T2 pulse sequences. The applicability of this synthetic FLAIR for estimating white matter lesions segmentation is demonstrated.

Original language	English (US)
Title of host publication	2010 7th IEEE International Symposium on Biomedical Imaging
Subtitle of host publication	From Nano to Macro, ISBI 2010 - Proceedings
Pages	932-935
Number of pages	4
DOIs	https://doi.org/10.1109/ISBI.2010.5490140
State	Published - 2010
Event	7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Rotterdam, Netherlands Duration: Apr 14 2010 → Apr 17 2010

Publication series

Name	2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings

Other

Other	7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010
Country/Territory	Netherlands
City	Rotterdam
Period	4/14/10 → 4/17/10

Keywords

Classification
Image resolution
Image segmentation
MRI

ASJC Scopus subject areas

Biomedical Engineering
Radiology Nuclear Medicine and imaging

Access to Document

10.1109/ISBI.2010.5490140

Cite this

Roy, S., Carass, A., Shiee, N., Pham, D., & Prince, J. L. (2010). MR contrast synthesis for lesion segmentation. In 2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings (pp. 932-935). Article 5490140 (2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings). https://doi.org/10.1109/ISBI.2010.5490140

MR contrast synthesis for lesion segmentation. / Roy, Snehashis; Carass, Aaron; Shiee, Navid et al.
2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings. 2010. p. 932-935 5490140 (2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Roy, S, Carass, A, Shiee, N, Pham, D & Prince, JL 2010, MR contrast synthesis for lesion segmentation. in 2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings., 5490140, 2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings, pp. 932-935, 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010, Rotterdam, Netherlands, 4/14/10. https://doi.org/10.1109/ISBI.2010.5490140

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MR contrast synthesis for lesion segmentation

Abstract

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Keywords

ASJC Scopus subject areas

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