Loss of heterozygosity and microsatellite instability at the retinoblastoma locus in osteosarcomas

Deborah A Belchis, Christine A. Meece, Floyd A. Benko, Peter K. Rogan, Roger A. Williams, Christopher Gocke

Research output: Contribution to journalArticle

Abstract

Studies of osteosarcoma cell lines or frozen tissue have detected loss of heterozygosity (LOH) at the retinoblastoma (RB) locus by Southern blot analysis or restriction fragment length polymorphism. Most archived clinical specimens cannot be analyzed by these techniques. We analyzed formalin- fixed, paraffin-embedded samples from 19 cases of osteosarcoma for molecular changes at the RB locus using polymerase chain reaction amplification of polymorphic short tandem repeat sequences (microsatellite repeats). Four repeat sequences, two within and two flanking the RB gene, were analyzed. Fourteen of 18 informative cases (78%) showed molecular changes at the RB locus. LOH was identified in 13 cases (72%). Unexpectedly, microsatellite instability (MI) was found in eight cases (44%). All of the cases of MI involved alterations of more than one repeat unit, and six of eight were associated with LOH. LOH was identified at three unlinked loci in one case and at a single locus in another. Microsatellite analysis of archival tissue yields prevalence rates of LOH comparable to those found by other methods and has the added advantage of showing MI. The ability to use formalin- fixed, paraffin-embedded tissue extends genetic analysis to routinely processed surgical material and may permit molecular confirmation of challenging cases of osteosarcoma.

Original languageEnglish (US)
Pages (from-to)214-219
Number of pages6
JournalDiagnostic Molecular Pathology
Volume5
Issue number3
DOIs
StatePublished - Sep 1996
Externally publishedYes

Fingerprint

Microsatellite Instability
Retinoblastoma
Loss of Heterozygosity
Osteosarcoma
Microsatellite Repeats
Paraffin
Formaldehyde
Retinoblastoma Genes
Tandem Repeat Sequences
Southern Blotting
Restriction Fragment Length Polymorphisms
Cell Line
Polymerase Chain Reaction

Keywords

  • Loss of heterozygosity
  • Microsatellite instability
  • Osteosarcoma
  • Polymerase chain reaction
  • Retinoblastoma gene

ASJC Scopus subject areas

  • Pathology and Forensic Medicine

Cite this

Loss of heterozygosity and microsatellite instability at the retinoblastoma locus in osteosarcomas. / Belchis, Deborah A; Meece, Christine A.; Benko, Floyd A.; Rogan, Peter K.; Williams, Roger A.; Gocke, Christopher.

In: Diagnostic Molecular Pathology, Vol. 5, No. 3, 09.1996, p. 214-219.

Research output: Contribution to journalArticle

Belchis, Deborah A ; Meece, Christine A. ; Benko, Floyd A. ; Rogan, Peter K. ; Williams, Roger A. ; Gocke, Christopher. / Loss of heterozygosity and microsatellite instability at the retinoblastoma locus in osteosarcomas. In: Diagnostic Molecular Pathology. 1996 ; Vol. 5, No. 3. pp. 214-219.
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