Integrated multiparametric radiomics and informatics system for characterizing breast tumor characteristics with the oncotypedx gene assay

Michael A. Jacobs, Christopher B. Umbricht, Vishwa S. Parekh, Riham H. El Khouli, Leslie Cope, Katarzyna J. Macura, Susan Harvey, Antonio C. Wolff

Research output: Contribution to journalArticlepeer-review

Abstract

Optimal use of multiparametric magnetic resonance imaging (mpMRI) can identify key MRI parameters and provide unique tissue signatures defining phenotypes of breast cancer. We have developed and implemented a new machine-learning informatic system, termed Informatics Radiomics Integration System (IRIS) that integrates clinical variables, derived from imaging and electronic medical health records (EHR) with multiparametric radiomics (mpRad) for identifying potential risk of local or systemic recurrence in breast cancer patients. We tested the model in patients (n = 80) who had Estrogen Receptor positive disease and underwent OncotypeDX gene testing, radiomic analysis, and breast mpMRI. The IRIS method was trained using the mpMRI, clinical, pathologic, and radiomic descriptors for prediction of the OncotypeDX risk score. The trained mpRad IRIS model had a 95% and specificity was 83% with an Area Under the Curve (AUC) of 0.89 for classifying low risk patients from the intermediate and high-risk groups. The lesion size was larger for the high-risk group (2.9 ± 1.7 mm) and lower for both low risk (1.9 ± 1.3 mm) and intermediate risk (1.7 ± 1.4 mm) groups. The lesion apparent diffusion coefficient (ADC) map values for high-and intermediate-risk groups were significantly (p < 0.05) lower than the low-risk group (1.14 vs. 1.49 × 10−3 mm2/s). These initial studies provide deeper insight into the clinical, pathological, quantitative imaging, and radiomic features, and provide the foundation to relate these features to the assessment of treatment response for improved personalized medicine.

Original languageEnglish (US)
Article number2772
Pages (from-to)1-23
Number of pages23
JournalCancers
Volume12
Issue number10
DOIs
StatePublished - Oct 2020

Keywords

  • ADC map
  • Breast
  • Cancer
  • DWI
  • Diffusion-weighted imaging
  • IRIS
  • Informatics
  • Machine learning
  • Magnetic resonance imaging
  • MpRad
  • Multiparametric radiomics
  • OncotypeDX
  • Radiomics

ASJC Scopus subject areas

  • Oncology
  • Cancer Research

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