Human KVLQT1 gene shows tissue-specific imprinting and encompasses Beckwith-Wiedemann syndrome chromosomal rearrangements

Maxwell P. Lee, Ren Ju Hu, Laura A. Johnson, Andrew P Feinberg

Research output: Contribution to journalArticle

Abstract

Genomic imprinting is an epigenetic chromosomal modification in the gamete or zygote causing preferential expression of a specific parental allele in somatic cells of the offspring. We and others have identified three imprinted human genes on 11p15.5, IGF2 (refs 1-4), H19 (refs 1,5), and p57(KIP2) (ref. 6), although the latter gene is separated by 700 kb from the other two, and it is unclear whether there are other imprinted genes within this large interval. We previously mapped an embryonal turnout suppressor gene to this region, as well as five balanced germline chromosomal rearrangement breakpoints from patients with Beckwith-Wiedemann syndrome (BWS), a condition characterized by prenatal overgrowth and cancer. We isolated the upstream exons of the previously identified gene KVLQT1, which causes the familial cardiac defect long-QT (LQT) syndrome. We found that KVLQT1 spans much of the interval between p57(KIP2) and IGF2, and that it is also imprinted. We demonstrated that the gene is disrupted by chromosomal rearrangements in BWS patients, as well as by a balanced chromosomal translocation in an embryonal rhabdoid tumour. Furthermore, the lack of parent-of-origin effect in LQT syndrome appears to be due to relative lack of imprinting in the affected tissue, cardiac muscle, representing a novel mechanism for variable penetrance of a human disease gene.

Original languageEnglish (US)
Pages (from-to)181-185
Number of pages5
JournalNature Genetics
Volume15
Issue number2
DOIs
StatePublished - Feb 1997

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Beckwith-Wiedemann Syndrome
Genes
Long QT Syndrome
Rhabdoid Tumor
Suppressor Genes
Genomic Imprinting
Genetic Translocation
Penetrance
Zygote
Epigenomics
Germ Cells
Exons
Myocardium
Alleles

ASJC Scopus subject areas

  • Genetics(clinical)
  • Genetics

Cite this

Human KVLQT1 gene shows tissue-specific imprinting and encompasses Beckwith-Wiedemann syndrome chromosomal rearrangements. / Lee, Maxwell P.; Hu, Ren Ju; Johnson, Laura A.; Feinberg, Andrew P.

In: Nature Genetics, Vol. 15, No. 2, 02.1997, p. 181-185.

Research output: Contribution to journalArticle

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