Helix 69 is key for uniformity during substrate selection on the ribosome

Rodrigo F. Ortiz-Meoz, Rachel Green

Research output: Contribution to journalArticle

Abstract

Structural studies of ribosome complexes with bound tRNAs and release factors show considerable contacts between these factors and helix 69 (H69) of 23 S rRNA. Although biochemical and genetic studies have provided some general insights into the role of H69 in tRNA and RF selection, a detailed understanding of these contributions remains elusive. Here, we present a pre-steady-state kinetic analysis establishing that two distinct regions of H69 make critical contributions to substrate selection. The loop of H69 (A1913) forms contacts necessary for the efficient accommodation of a subset of natural tRNA species, whereas the base of the stem (G1922) is specifically critical for UGA codon recognition by the class 1 release factor RF2. These data define a broad and critical role for this centrally located intersubunit helix (H69) in accurate and efficient substrate recognition by the ribosome.

Original languageEnglish (US)
Pages (from-to)25604-25610
Number of pages7
JournalJournal of Biological Chemistry
Volume286
Issue number29
DOIs
StatePublished - Jul 22 2011

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Transfer RNA
Ribosomes
Substrates
Terminator Codon
Molecular Biology
Kinetics

ASJC Scopus subject areas

  • Biochemistry
  • Cell Biology
  • Molecular Biology

Cite this

Helix 69 is key for uniformity during substrate selection on the ribosome. / Ortiz-Meoz, Rodrigo F.; Green, Rachel.

In: Journal of Biological Chemistry, Vol. 286, No. 29, 22.07.2011, p. 25604-25610.

Research output: Contribution to journalArticle

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