Exome sequencing to identify de novo mutations in sporadic ALS trios

Alessandra Chesi, Brett T. Staahl, Ana Jovičić, Julien Couthouis, Maria Fasolino, Alya R. Raphael, Tomohiro Yamazaki, Laura Elias, Meraida Polak, Crystal Kelly, Kelly L. Williams, Jennifer A. Fifita, Nicholas J Maragakis, Garth A. Nicholson, Oliver D. King, Robin Reed, Gerald R. Crabtree, Ian P. Blair, Jonathan D. Glass, Aaron D. Gitler

Research output: Contribution to journalArticle

Abstract

Amyotrophic lateral sclerosis (ALS) is a devastating neurodegenerative disease whose causes are still poorly understood. To identify additional genetic risk factors, we assessed the role of de novo mutations in ALS by sequencing the exomes of 47 ALS patients and both of their unaffected parents (n = 141 exomes). We found that amino acid-altering de novo mutations were enriched in genes encoding chromatin regulators, including the neuronal chromatin remodeling complex (nBAF) component SS18L1 (also known as CREST). CREST mutations inhibited activity-dependent neurite outgrowth in primary neurons, and CREST associated with the ALS protein FUS. These findings expand our understanding of the ALS genetic landscape and provide a resource for future studies into the pathogenic mechanisms contributing to sporadic ALS.

Original languageEnglish (US)
Pages (from-to)851-855
Number of pages5
JournalNature Neuroscience
Volume16
Issue number7
DOIs
StatePublished - 2013

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Exome
Amyotrophic Lateral Sclerosis
Mutation
RNA-Binding Protein FUS
Neuronal Plasticity
Chromatin Assembly and Disassembly
Neurodegenerative Diseases
Chromatin
Parents
Amyotrophic lateral sclerosis 1
Neurons
Amino Acids
Genes

ASJC Scopus subject areas

  • Neuroscience(all)
  • Medicine(all)

Cite this

Chesi, A., Staahl, B. T., Jovičić, A., Couthouis, J., Fasolino, M., Raphael, A. R., ... Gitler, A. D. (2013). Exome sequencing to identify de novo mutations in sporadic ALS trios. Nature Neuroscience, 16(7), 851-855. https://doi.org/10.1038/nn.3412

Exome sequencing to identify de novo mutations in sporadic ALS trios. / Chesi, Alessandra; Staahl, Brett T.; Jovičić, Ana; Couthouis, Julien; Fasolino, Maria; Raphael, Alya R.; Yamazaki, Tomohiro; Elias, Laura; Polak, Meraida; Kelly, Crystal; Williams, Kelly L.; Fifita, Jennifer A.; Maragakis, Nicholas J; Nicholson, Garth A.; King, Oliver D.; Reed, Robin; Crabtree, Gerald R.; Blair, Ian P.; Glass, Jonathan D.; Gitler, Aaron D.

In: Nature Neuroscience, Vol. 16, No. 7, 2013, p. 851-855.

Research output: Contribution to journalArticle

Chesi, A, Staahl, BT, Jovičić, A, Couthouis, J, Fasolino, M, Raphael, AR, Yamazaki, T, Elias, L, Polak, M, Kelly, C, Williams, KL, Fifita, JA, Maragakis, NJ, Nicholson, GA, King, OD, Reed, R, Crabtree, GR, Blair, IP, Glass, JD & Gitler, AD 2013, 'Exome sequencing to identify de novo mutations in sporadic ALS trios', Nature Neuroscience, vol. 16, no. 7, pp. 851-855. https://doi.org/10.1038/nn.3412
Chesi A, Staahl BT, Jovičić A, Couthouis J, Fasolino M, Raphael AR et al. Exome sequencing to identify de novo mutations in sporadic ALS trios. Nature Neuroscience. 2013;16(7):851-855. https://doi.org/10.1038/nn.3412
Chesi, Alessandra ; Staahl, Brett T. ; Jovičić, Ana ; Couthouis, Julien ; Fasolino, Maria ; Raphael, Alya R. ; Yamazaki, Tomohiro ; Elias, Laura ; Polak, Meraida ; Kelly, Crystal ; Williams, Kelly L. ; Fifita, Jennifer A. ; Maragakis, Nicholas J ; Nicholson, Garth A. ; King, Oliver D. ; Reed, Robin ; Crabtree, Gerald R. ; Blair, Ian P. ; Glass, Jonathan D. ; Gitler, Aaron D. / Exome sequencing to identify de novo mutations in sporadic ALS trios. In: Nature Neuroscience. 2013 ; Vol. 16, No. 7. pp. 851-855.
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