Distinct genetic profiles in colorectal tumors with or without the CpG island methylator phenotype

Minoru Toyota, Mutsumi Ohe-Toyota, Nita Ahuja, Jean Pierre J Issa

Research output: Contribution to journalArticle

Abstract

Colorectal cancers (CRCs) are characterized by multiple genetic (mutations) and epigenetic (CpG island methylation) alterations, but it is not known whether these evolve independently through stochastic processes. We have recently described a novel pathway termed CpG island methylator phenotype (CIMP) in CRC, which is characterized by the simultaneous methylation of multiple CpG islands, including several known genes, such as p16, hMLH1, and THBS1. We have now studied mutations in K-RAS, p53, DPC4, and TGFβRII in a panel of colorectal tumors with or without CIMP. We find that CIMP defines two groups of tumors with significantly different genetic lesions: frequent K-RAS mutations were found in CIMP+ CRCs (28/41, 68%) compared with CIMP- cases (14/47, 30%, P = 0.0005). By contrast, p53 mutations were found in 24% (10/41) of CIMP+ CRCs vs. 60% (30/46) of CIMP- cases (P = 0.002). Both of these differences were independent of microsatellite instability. These interactions between CIMP, K-RAS mutations, and p53 mutations were preserved in colorectal adenomas, suggesting that they occur early in carcinogenesis. The distinct combinations of epigenetic and genetic alterations in each group suggest that activation of oncogenes and inactivation of tumor suppressor genes is related to the underlying mechanism of generating molecular diversity in cancer, rather than simply accumulate stochastically during cancer development.

Original languageEnglish (US)
Pages (from-to)710-715
Number of pages6
JournalProceedings of the National Academy of Sciences of the United States of America
Volume97
Issue number2
DOIs
StatePublished - Jan 18 2000

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CpG Islands
Colorectal Neoplasms
Phenotype
Mutation
Epigenomics
Methylation
Stochastic Processes
Neoplasms
Microsatellite Instability
Tumor Suppressor Genes
Oncogenes
Adenoma
Carcinogenesis

ASJC Scopus subject areas

  • Genetics
  • General

Cite this

Distinct genetic profiles in colorectal tumors with or without the CpG island methylator phenotype. / Toyota, Minoru; Ohe-Toyota, Mutsumi; Ahuja, Nita; Issa, Jean Pierre J.

In: Proceedings of the National Academy of Sciences of the United States of America, Vol. 97, No. 2, 18.01.2000, p. 710-715.

Research output: Contribution to journalArticle

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