Detection of Venous Thromboembolism by Proteomic Serum Biomarkers

Santhi K. Ganesh, Yugal Sharma, Judith Dayhoff, Henry M. Fales, Jennifer Van Eyk, Thomas S. Kickler, Eric M. Billings, Elizabeth G. Nabel

Research output: Contribution to journalArticle

Abstract

Background:Available blood assays for venous thromboembolism (VTE) suffer from diminished specificity. Compared with single marker tests, such as D-dimer, a multi-marker strategy may improve diagnostic ability. We used direct mass spectrometry (MS) analysis of serum from patients with VTE to determine whether protein expression profiles would predict diagnosis.Methods and Results:We developed a direct MS and computational approach to the proteomic analysis of serum. Using this new method, we analyzed serum from inpatients undergoing radiographic evaluation for VTE. In a balanced cohort of 76 patients, a neural network-based prediction model was built using a training subset of the cohort to first identify proteomic patterns of VTE. The proteomic patterns were then validated in a separate group of patients within the cohort. The model yielded a sensitivity of 68% and specificity of 89%, which exceeded the specificity of D-dimer assay tested by latex agglutination, ELISA, and immunoturbimetric methods (sensitivity/specificity of 63.2%/60.5%, 97.4%/21.1%, 97.4%/15.8%, respectively). We validated differences in protein expression between patients with and without VTE using more traditional gel-based analysis of the same serum samples.Conclusion:Protein expression analysis of serum using direct MS demonstrates potential diagnostic utility for VTE. This pilot study is the first such direct MS study to be applied to a cardiovascular disease. Differences in protein expression were identified and subsequently validated in a separate group of patients. The findings in this initial cohort can be evaluated in other independent cohorts, including patients with inflammatory conditions and chronic (but not acute) VTE, for the diagnosis of VTE.

Original languageEnglish (US)
Article numbere544
JournalPloS one
Volume2
Issue number6
DOIs
StatePublished - 2007

ASJC Scopus subject areas

  • Biochemistry, Genetics and Molecular Biology(all)
  • Agricultural and Biological Sciences(all)
  • General

Fingerprint Dive into the research topics of 'Detection of Venous Thromboembolism by Proteomic Serum Biomarkers'. Together they form a unique fingerprint.

  • Cite this

    Ganesh, S. K., Sharma, Y., Dayhoff, J., Fales, H. M., Van Eyk, J., Kickler, T. S., Billings, E. M., & Nabel, E. G. (2007). Detection of Venous Thromboembolism by Proteomic Serum Biomarkers. PloS one, 2(6), [e544]. https://doi.org/10.1371/journal.pone.0000544