Data on whole genome sequencing of extrapulmonary tuberculosis clinical isolates from India

Jayshree Advani; Kusum Sharma; Renu Verma; Oishi Chatterjee; Hitendra S. Solanki; Aman Sharma; Subhash Varma; Manish Modi; Pallab Ray; Megha Sharma; M. S. Dhillion; Akhilesh Pandey; Harsha Gowda; T. S.Keshava Prasad

doi:10.1016/j.dib.2018.08.048

Data on whole genome sequencing of extrapulmonary tuberculosis clinical isolates from India

Jayshree Advani, Kusum Sharma, Renu Verma, Oishi Chatterjee, Hitendra S. Solanki, Aman Sharma, Subhash Varma, Manish Modi, Pallab Ray, Megha Sharma, M. S. Dhillion, Akhilesh Pandey, Harsha Gowda, T. S.Keshava Prasad

School of Medicine

Research output: Contribution to journal › Article › peer-review

Abstract

This article describes the whole genome sequencing data from 5 extrapulmonary tuberculosis clinical isolates. The whole genome sequencing was carried out on Illumina MiSeq platform to identify single nucleotide variations (SNVs) associated with drug resistance. A total of 214 SNVs in the coding and promoter regions were identified in the whole genome sequencing analysis. Among the identified SNVs, 18 SNVs were identified in genes known to be associated with first and second line drug resistance. The data is related to the research article “Whole genome sequencing of Mycobacterium tuberculosis isolates from extrapulmonary sites” (Sharma et al., 2017) [1].

Original language	English (US)
Pages (from-to)	617-622
Number of pages	6
Journal	Data in Brief
Volume	20
DOIs	https://doi.org/10.1016/j.dib.2018.08.048
State	Published - Oct 1 2018

ASJC Scopus subject areas

General

Access to Document

10.1016/j.dib.2018.08.048

Cite this

@article{5a3b6f372c9a49ac9745b0a09e682895,

title = "Data on whole genome sequencing of extrapulmonary tuberculosis clinical isolates from India",

abstract = "This article describes the whole genome sequencing data from 5 extrapulmonary tuberculosis clinical isolates. The whole genome sequencing was carried out on Illumina MiSeq platform to identify single nucleotide variations (SNVs) associated with drug resistance. A total of 214 SNVs in the coding and promoter regions were identified in the whole genome sequencing analysis. Among the identified SNVs, 18 SNVs were identified in genes known to be associated with first and second line drug resistance. The data is related to the research article “Whole genome sequencing of Mycobacterium tuberculosis isolates from extrapulmonary sites” (Sharma et al., 2017) [1].",

author = "Jayshree Advani and Kusum Sharma and Renu Verma and Oishi Chatterjee and Solanki, {Hitendra S.} and Aman Sharma and Subhash Varma and Manish Modi and Pallab Ray and Megha Sharma and Dhillion, {M. S.} and Akhilesh Pandey and Harsha Gowda and Prasad, {T. S.Keshava}",

year = "2018",

month = oct,

day = "1",

doi = "10.1016/j.dib.2018.08.048",

language = "English (US)",

volume = "20",

pages = "617--622",

journal = "Data in Brief",

issn = "2352-3409",

publisher = "Elsevier BV",

}

TY - JOUR

T1 - Data on whole genome sequencing of extrapulmonary tuberculosis clinical isolates from India

AU - Advani, Jayshree

AU - Sharma, Kusum

AU - Verma, Renu

AU - Chatterjee, Oishi

AU - Solanki, Hitendra S.

AU - Sharma, Aman

AU - Varma, Subhash

AU - Modi, Manish

AU - Ray, Pallab

AU - Sharma, Megha

AU - Dhillion, M. S.

AU - Pandey, Akhilesh

AU - Gowda, Harsha

AU - Prasad, T. S.Keshava

PY - 2018/10/1

Y1 - 2018/10/1

N2 - This article describes the whole genome sequencing data from 5 extrapulmonary tuberculosis clinical isolates. The whole genome sequencing was carried out on Illumina MiSeq platform to identify single nucleotide variations (SNVs) associated with drug resistance. A total of 214 SNVs in the coding and promoter regions were identified in the whole genome sequencing analysis. Among the identified SNVs, 18 SNVs were identified in genes known to be associated with first and second line drug resistance. The data is related to the research article “Whole genome sequencing of Mycobacterium tuberculosis isolates from extrapulmonary sites” (Sharma et al., 2017) [1].

AB - This article describes the whole genome sequencing data from 5 extrapulmonary tuberculosis clinical isolates. The whole genome sequencing was carried out on Illumina MiSeq platform to identify single nucleotide variations (SNVs) associated with drug resistance. A total of 214 SNVs in the coding and promoter regions were identified in the whole genome sequencing analysis. Among the identified SNVs, 18 SNVs were identified in genes known to be associated with first and second line drug resistance. The data is related to the research article “Whole genome sequencing of Mycobacterium tuberculosis isolates from extrapulmonary sites” (Sharma et al., 2017) [1].

UR - http://www.scopus.com/inward/record.url?scp=85052851165&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=85052851165&partnerID=8YFLogxK

U2 - 10.1016/j.dib.2018.08.048

DO - 10.1016/j.dib.2018.08.048

M3 - Article

C2 - 30197919

AN - SCOPUS:85052851165

SN - 2352-3409

VL - 20

SP - 617

EP - 622

JO - Data in Brief

JF - Data in Brief

ER -

Data on whole genome sequencing of extrapulmonary tuberculosis clinical isolates from India

Abstract

ASJC Scopus subject areas

Access to Document

Other files and links

Fingerprint

Cite this