Cytosolic extensions directly regulate a rhomboid protease by modulating substrate gating

Rosanna Baker, Sinisa Urban

Research output: Contribution to journalArticle

Abstract

Intramembrane proteases catalyse the signal-generating step of various cell signalling pathways, and continue to be implicated in diseases ranging from malaria infection to Parkinsonian neurodegeneration1-3. Despite playing such decisive roles, it remains unclear whether or how these membrane-immersed enzymes might be regulated directly. To address this limitation, here we focus on intramembrane proteases containing domains known to exert regulatory functions in other contexts, and characterize a rhomboid protease that harbours calcium-binding EF-hands. We find calcium potently stimulates proteolysis by endogenous rhomboid-4 in Drosophila cells, and, remarkably, when rhomboid-4 is purified and reconstituted in liposomes. Interestingly, deleting the amino-terminal EF-hands activates proteolysis prematurely, while residues in cytoplasmic loops connecting distal transmembrane segments mediate calcium stimulation. Rhomboid regulation is not orchestrated by either dimerization or substrate interactions. Instead, calcium increases catalytic rate by promoting substrate gating. Substrates with cleavage sites outside the membrane can be cleaved but lose the capacity to be regulated. These observations indicate substrate gating is not an essential step in catalysis, but instead evolved as a mechanism for regulating proteolysis inside the membrane. Moreover, these insights provide new approaches for studying rhomboid functions by investigating upstream inputs that trigger proteolysis.

Original languageEnglish (US)
Pages (from-to)101-105
Number of pages5
JournalNature
Volume523
Issue number7558
DOIs
StatePublished - Jul 1 2015

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Proteolysis
Peptide Hydrolases
Calcium
EF Hand Motifs
Membranes
Dimerization
Catalysis
Liposomes
Malaria
Drosophila
Enzymes
Infection

ASJC Scopus subject areas

  • General

Cite this

Cytosolic extensions directly regulate a rhomboid protease by modulating substrate gating. / Baker, Rosanna; Urban, Sinisa.

In: Nature, Vol. 523, No. 7558, 01.07.2015, p. 101-105.

Research output: Contribution to journalArticle

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