Cortical column and whole-brain imaging with molecular contrast and nanoscale resolution

Ruixuan Gao, Shoh M. Asano, Srigokul Upadhyayula, Igor Pisarev, Daniel E. Milkie, Tsung Li Liu, Ved Singh, Austin Graves, Grace H. Huynh, Yongxin Zhao, John Bogovic, Jennifer Colonell, Carolyn M. Ott, Christopher Zugates, Susan Tappan, Alfredo Rodriguez, Kishore R. Mosaliganti, Shu Hsien Sheu, H. Amalia Pasolli, Song PangC. Shan Xu, Sean G. Megason, Harald Hess, Jennifer Lippincott-Schwartz, Adam Hantman, Gerald M. Rubin, Tom Kirchhausen, Stephan Saalfeld, Yoshinori Aso, Edward S. Boyden, Eric Betzig

Research output: Contribution to journalArticle

Abstract

Optical and electron microscopy have made tremendous inroads toward understanding the complexity of the brain. However, optical microscopy offers insufficient resolution to reveal subcellular details, and electron microscopy lacks the throughput and molecular contrast to visualize specific molecular constituents over millimeter-scale or larger dimensions. We combined expansion microscopy and lattice light-sheet microscopy to image the nanoscale spatial relationships between proteins across the thickness of the mouse cortex or the entire Drosophila brain. These included synaptic proteins at dendritic spines, myelination along axons, and presynaptic densities at dopaminergic neurons in every fly brain region. The technology should enable statistically rich, large-scale studies of neural development, sexual dimorphism, degree of stereotypy, and structural correlations to behavior or neural activity, all with molecular contrast.

Original languageEnglish (US)
Article numbereaau8302
JournalScience
Volume363
Issue number6424
DOIs
StatePublished - Jan 18 2019

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Neuroimaging
Microscopy
Electron Microscopy
Brain
Dendritic Spines
Dopaminergic Neurons
Diptera
Sex Characteristics
Drosophila
Axons
Proteins
Technology
Light

ASJC Scopus subject areas

  • General

Cite this

Gao, R., Asano, S. M., Upadhyayula, S., Pisarev, I., Milkie, D. E., Liu, T. L., ... Betzig, E. (2019). Cortical column and whole-brain imaging with molecular contrast and nanoscale resolution. Science, 363(6424), [eaau8302]. https://doi.org/10.1126/science.aau8302

Cortical column and whole-brain imaging with molecular contrast and nanoscale resolution. / Gao, Ruixuan; Asano, Shoh M.; Upadhyayula, Srigokul; Pisarev, Igor; Milkie, Daniel E.; Liu, Tsung Li; Singh, Ved; Graves, Austin; Huynh, Grace H.; Zhao, Yongxin; Bogovic, John; Colonell, Jennifer; Ott, Carolyn M.; Zugates, Christopher; Tappan, Susan; Rodriguez, Alfredo; Mosaliganti, Kishore R.; Sheu, Shu Hsien; Pasolli, H. Amalia; Pang, Song; Xu, C. Shan; Megason, Sean G.; Hess, Harald; Lippincott-Schwartz, Jennifer; Hantman, Adam; Rubin, Gerald M.; Kirchhausen, Tom; Saalfeld, Stephan; Aso, Yoshinori; Boyden, Edward S.; Betzig, Eric.

In: Science, Vol. 363, No. 6424, eaau8302, 18.01.2019.

Research output: Contribution to journalArticle

Gao, R, Asano, SM, Upadhyayula, S, Pisarev, I, Milkie, DE, Liu, TL, Singh, V, Graves, A, Huynh, GH, Zhao, Y, Bogovic, J, Colonell, J, Ott, CM, Zugates, C, Tappan, S, Rodriguez, A, Mosaliganti, KR, Sheu, SH, Pasolli, HA, Pang, S, Xu, CS, Megason, SG, Hess, H, Lippincott-Schwartz, J, Hantman, A, Rubin, GM, Kirchhausen, T, Saalfeld, S, Aso, Y, Boyden, ES & Betzig, E 2019, 'Cortical column and whole-brain imaging with molecular contrast and nanoscale resolution', Science, vol. 363, no. 6424, eaau8302. https://doi.org/10.1126/science.aau8302
Gao R, Asano SM, Upadhyayula S, Pisarev I, Milkie DE, Liu TL et al. Cortical column and whole-brain imaging with molecular contrast and nanoscale resolution. Science. 2019 Jan 18;363(6424). eaau8302. https://doi.org/10.1126/science.aau8302
Gao, Ruixuan ; Asano, Shoh M. ; Upadhyayula, Srigokul ; Pisarev, Igor ; Milkie, Daniel E. ; Liu, Tsung Li ; Singh, Ved ; Graves, Austin ; Huynh, Grace H. ; Zhao, Yongxin ; Bogovic, John ; Colonell, Jennifer ; Ott, Carolyn M. ; Zugates, Christopher ; Tappan, Susan ; Rodriguez, Alfredo ; Mosaliganti, Kishore R. ; Sheu, Shu Hsien ; Pasolli, H. Amalia ; Pang, Song ; Xu, C. Shan ; Megason, Sean G. ; Hess, Harald ; Lippincott-Schwartz, Jennifer ; Hantman, Adam ; Rubin, Gerald M. ; Kirchhausen, Tom ; Saalfeld, Stephan ; Aso, Yoshinori ; Boyden, Edward S. ; Betzig, Eric. / Cortical column and whole-brain imaging with molecular contrast and nanoscale resolution. In: Science. 2019 ; Vol. 363, No. 6424.
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AU - Hantman, Adam

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AU - Kirchhausen, Tom

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