Cell fate potentials and switching kinetics uncovered in a classic bistable genetic switch

Xiaona Fang, Qiong Liu, Christopher Bohrer, Zach Hensel, Wei Han, Jin Wang, Jie Xiao

Research output: Contribution to journalArticle

Abstract

Bistable switches are common gene regulatory motifs directing two mutually exclusive cell fates. Theoretical studies suggest that bistable switches are sufficient to encode more than two cell fates without rewiring the circuitry due to the non-equilibrium, heterogeneous cellular environment. However, such a scenario has not been experimentally observed. Here by developing a new, dual single-molecule gene-expression reporting system, we find that for the two mutually repressing transcription factors CI and Cro in the classic bistable bacteriophage λ switch, there exist two new production states, in which neither CI nor Cro is produced, or both CI and Cro are produced. We construct the corresponding potential landscape and map the transition kinetics among the four production states. These findings uncover cell fate potentials beyond the classical picture of bistable switches, and open a new window to explore the genetic and environmental origins of the cell fate decision-making process in gene regulatory networks.

Original languageEnglish (US)
Article number2787
JournalNature Communications
Volume9
Issue number1
DOIs
StatePublished - Dec 1 2018

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switches
Switches
Kinetics
kinetics
cells
genes
Genes
Switch Genes
bacteriophages
Bacteriophages
Gene Regulatory Networks
gene expression
decision making
Gene expression
Decision Making
Transcription Factors
Theoretical Models
Decision making
Gene Expression
Molecules

ASJC Scopus subject areas

  • Chemistry(all)
  • Biochemistry, Genetics and Molecular Biology(all)
  • Physics and Astronomy(all)

Cite this

Cell fate potentials and switching kinetics uncovered in a classic bistable genetic switch. / Fang, Xiaona; Liu, Qiong; Bohrer, Christopher; Hensel, Zach; Han, Wei; Wang, Jin; Xiao, Jie.

In: Nature Communications, Vol. 9, No. 1, 2787, 01.12.2018.

Research output: Contribution to journalArticle

Fang, Xiaona ; Liu, Qiong ; Bohrer, Christopher ; Hensel, Zach ; Han, Wei ; Wang, Jin ; Xiao, Jie. / Cell fate potentials and switching kinetics uncovered in a classic bistable genetic switch. In: Nature Communications. 2018 ; Vol. 9, No. 1.
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