A single nucleotide polymorphism in the proximal IFN-gamma promoter alters control of gene transcription

J. H. Bream, A. Ping, X. Zhang, C. Winkler, H. A. Young

Research output: Contribution to journalArticle

Abstract

Interferon-gamma (IFN-γ) is an important cytokine that regulates cellular immune responses to intracellular pathogens and neoplasia. Regulation of IFN-γ expression is stringently controlled at the transcriptional level. In this report we describe two novel single nucleotide polymorphisms (SNPs); one, at -179 in the promoter, occurs in 4% of African Americans. This SNP represents a guanidine to thymidine transition and creates a potential AP-1 binding element. Electrophoretic mobility shift analysis reveals a unique complex binding to an oligonucleotide containing the variant -179T but not to the -179G using nuclear extracts from human peripheral blood T cells. In reporter gene assays, T cell lines transfected with the variant -204(179T) IFN-γ, promoter show a six to 13-fold induction of luciferase activity in response to TNF-α over the common -204(179G) construct. The -179T allele identified in the proximal IFN-γ promoter confers TNF-α inducibility and may prove important in human immune disorders and responsiveness to pathogens.

Original languageEnglish (US)
Pages (from-to)165-169
Number of pages5
JournalGenes and immunity
Volume3
Issue number3
DOIs
StatePublished - May 1 2002
Externally publishedYes

Keywords

  • Gene transcription
  • Proximal IFN-γ promoter
  • Single nucleotide polymorphism

ASJC Scopus subject areas

  • Immunology
  • Genetics
  • Genetics(clinical)

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