A genome-scale shRNA resource for transgenic RNAi in Drosophila

Jian Quan Ni, Rui Zhou, Benjamin Czech, Lu Ping Liu, Laura Holderbaum, Donghui Yang-Zhou, Hye Seok Shim, Rong Tao, Dominik Handler, Phillip Karpowicz, Richard Binari, Matthew Booker, Julius Brennecke, Lizabeth A. Perkins, Gregory J. Hannon, Norbert Perrimon

Research output: Contribution to journalArticlepeer-review

475 Scopus citations

Abstract

Existing transgenic RNAi resources in Drosophila melanogaster based on long double-stranded hairpin RNAs are powerful tools for functional studies, but they are ineffective in gene knockdown during oogenesis, an important model system for the study of many biological questions. We show that shRNAs, modeled on an endogenous microRNA, are extremely effective at silencing gene expression during oogenesis. We also describe our progress toward building a genome-wide shRNA resource.

Original languageEnglish (US)
Pages (from-to)405-407
Number of pages3
JournalNature Methods
Volume8
Issue number5
DOIs
StatePublished - May 2011
Externally publishedYes

ASJC Scopus subject areas

  • Biotechnology
  • Biochemistry
  • Molecular Biology
  • Cell Biology

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