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• 2011

  Silent cerebral infarcts occur despite regular blood transfusion therapy after first strokes in children with sickle cell disease

  Hulbert, M. L., McKinstry, R. C., Lacey, J. A. L., Moran, C. J., Panepinto, J. A., Thompson, A. A., Sarnaik, S. A., Woods, G. M., Casella, J. F., Inusa, B., Howard, J., Kirkham, F. J., Anie, K. A., Mullin, J. E., Ichord, R., Noetzel, M., Yan, Rodeghier, M. & DeBaun, M. R., Jan 20 2011, In: Blood. 117, 3, p. 772-779 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Sickle Cell Anemia
  • Blood Transfusion
  • Blood
  • Stroke
  • Child

• Silent myocardial ischaemia and long-term coronary artery disease outcomes in apparently healthy people from families with early-onset ischaemic heart disease

  Kral, B. G., Becker, L. C., Vaidya, D., Yanek, L. R. & Becker, D. M., Nov 2011, In: European heart journal. 32, 22, p. 2766-2772 7 p.

  Research output: Contribution to journal › Article › peer-review

  • Myocardial Ischemia
  • Coronary Artery Disease
  • Siblings
  • Ischemia
  • Perfusion Imaging

• Silver enhances the in vitro antifungal activity of the saponin, CAY-1

  De Lucca, A. J., Boue, S., Sien, T., Cleveland, T. E. & Walsh, T. J., Jul 1 2011, In: Mycoses. 54, 4, p. e1-e9

  Research output: Contribution to journal › Article › peer-review

  • Saponins
  • Silver
  • Fungal Spores
  • ethylenediamine
  • Fusarium

• Silybin inhibits interleukin-1β-induced production of pro-inflammatory mediators in canine hepatocyte cultures

  Au, A. Y., Hasenwinkel, J. M. & Frondoza, C. G., Apr 1 2011, In: Journal of Veterinary Pharmacology and Therapeutics. 34, 2, p. 120-129 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Silybin
  • interleukin-1
  • Interleukin-1
  • hepatocytes
  • Canidae

• Sim4db and Leaff: Utilities for fast batch spliced alignment and sequence indexing

  Walenz, B. & Florea, L., Jul 2011, In: Bioinformatics. 27, 13, p. 1869-1870 2 p., btr285.

  Research output: Contribution to journal › Article › peer-review

  • Indexing
  • Sequence Alignment
  • Alignment
  • Batch
  • Genome

• Simian immunodeficiency virus infection in the brain and lung leads to differential type I IFN signaling during acute infection

  Alammar, L., Gama, L. & Clements, J. E., Apr 1 2011, In: Journal of Immunology. 186, 7, p. 4008-4018 11 p.

  Research output: Contribution to journal › Article › peer-review

  • Simian Immunodeficiency Virus
  • Virus Diseases
  • Lung
  • TYK2 Kinase
  • Brain

• Similarities and differences between diabetic and idiopathic gastroparesis

  Parkman, H. P., Yates, K., Hasler, W. L., Nguyen, L., Pasricha, P. J., Snape, W. J., Farrugia, G., Koch, K. L., Calles, J., Abell, T. L., McCallum, R. W., Lee, L., Unalp-Arida, A., Tonascia, J. & Hamilton, F., Dec 2011, In: Clinical Gastroenterology and Hepatology. 9, 12, p. 1056-1064 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Gastroparesis
  • Gastric Emptying
  • Type 1 Diabetes Mellitus
  • Vomiting
  • National Institute of Diabetes and Digestive and Kidney Diseases (U.S.)

• Similarities and differences in arterial responses to hypercapnia and visual stimulation

  Ho, Y. C. L., Petersen, E. T., Zimine, I. & Golay, X., Feb 2011, In: Journal of Cerebral Blood Flow and Metabolism. 31, 2, p. 560-571 12 p.

  Research output: Contribution to journal › Article › peer-review

  • Photic Stimulation
  • Hypercapnia
  • Gray Matter
  • Cerebrovascular Circulation
  • Blood Volume

• Simon Bolivar's medical labyrinth: An infectious diseases conundrum

  Auwaerter, P. G., Dove, J. & Mackowiak, P. A., Jan 1 2011, In: Clinical Infectious Diseases. 52, 1, p. 78-85 8 p.

  Research output: Contribution to journal › Review article › peer-review

  • Inner Ear
  • Communicable Diseases
  • Autopsy
  • Paracoccidioidomycosis
  • Bronchiectasis

• Simple, age-based formula for predicting renal length in children

  Akhavan, A., Brajtbord, J. S., McLeod, D. J., Kabarriti, A. E., Rosenberg, H. K. & Stock, J. A., Aug 1 2011, In: Urology. 78, 2, p. 405-410 6 p.

  Research output: Contribution to journal › Article › peer-review

  • Kidney
  • Child
  • Urologic Diseases
  • Nomograms
  • Population

• Simple morphology

  Desai, M. Y. & Schoenhagen, P., Dec 21 2011, Cardiac Computed Tomography: Problem-Based Learning. Wolters Kluwer Health Adis (ESP)

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

• Simple paradigm for extra-cerebral tissue removal: Algorithm and analysis

  Carass, A., Cuzzocreo, J., Wheeler, M. B., Bazin, P. L., Resnick, S. M. & Prince, J. L., Jun 15 2011, In: NeuroImage. 56, 4, p. 1982-1992 11 p.

  Research output: Contribution to journal › Article › peer-review

  • Datasets
  • Brain
  • Elastic Tissue
  • Cerebrum
  • Gray Matter

• Simplified flow cytometric assessment in mycosis fungoides and sézary syndrome

  Hristov, A. C., Vonderheid, E. C. & Borowitz, M. J., Dec 2011, In: American journal of clinical pathology. 136, 6, p. 944-953 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Mycosis Fungoides
  • T-Lymphocytes
  • Flow Cytometry
  • Skin Diseases

• Simplify to clarify.

  Wong, B., Aug 2011, In: Nature Methods. 8, 8, p. 611 1 p.

  Research output: Contribution to journal › Article › peer-review

• Simulated pediatric resuscitation use for personal protective equipment adherence measurement and training during the 2009 influenza (H1N1) pandemic

  Watson, C. M., Duval-Arnould, J. M., McCrory, M. C., Froz, S., Connors, C., Perl, T. M. & Hunt, E. A., Nov 2011, In: Joint Commission Journal on Quality and Patient Safety. 37, 11, p. 515-523 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Personal Protective Equipment
  • Pandemics
  • Resuscitation
  • Human Influenza
  • Pediatrics

• Simulated sunlight action spectra for inactivation of MS2 and PRD1 bacteriophages in clear water

  Fisher, M. B., Love, D. C., Schuech, R. & Nelson, K. L., Nov 1 2011, In: Environmental Science and Technology. 45, 21, p. 9249-9255 7 p.

  Research output: Contribution to journal › Article › peer-review

  • Bacteriophages
  • bacteriophage
  • Viruses
  • virus
  • Water

• Simulation in healthcare: One size fits all?

  Lazzara, E. H., Weaver, S. J., Weinger, M. B., Feldman, M., Rosen, M. A., Harrison, K. & Seagull, F. J., Nov 28 2011, Proceedings of the Human Factors and Ergonomics Society 55th Annual Meeting, HFES 2011. p. 828-830 3 p. (Proceedings of the Human Factors and Ergonomics Society).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • simulation
  • Healthcare
  • clinical care
  • Education
  • Human engineering

• Simulation of ultra low-dose scans in quantum counting clinical CT

  Weidinger, T., Buzug, T. M., Flohr, T., Fung, G. S. K., Kappler, S., Stierstorfer, K. & Tsui, B. M. W., Jan 1 2011, 2011 IEEE Nuclear Science Symposium and Medical Imaging Conference, NSS/MIC 2011. Institute of Electrical and Electronics Engineers Inc., p. 2495-2499 5 p. 6152676. (IEEE Nuclear Science Symposium Conference Record).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • counting
  • tomography
  • X-Rays
  • Tomography
  • dosage

• Simulations of prosthetic vision

  Barry, M. P. & Dagnelie, G., Dec 1 2011, Visual Prosthetics: Physiology, Bioengineering, Rehabilitation. Springer US, p. 319-341 23 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Prosthetics
  • Prostheses and Implants
  • Object recognition
  • Face recognition
  • Patient rehabilitation

• Simultaneous analysis of glycosylated and sialylated prostate-specific antigen revealing differential distribution of glycosylated prostate-specific antigen isoforms in prostate cancer tissues

  Li, Y., Tian, Y., Rezai, T., Prakash, A., Lopez, M. F., Chan, D. W. & Zhang, H., Jan 1 2011, In: Analytical chemistry. 83, 1, p. 240-245 6 p.

  Research output: Contribution to journal › Article › peer-review

  • Glycosylation
  • Prostate-Specific Antigen
  • Tissue
  • Protein Isoforms
  • Glycoproteins

• Simultaneous determination of raltegravir and raltegravir glucuronide in human plasma by liquid chromatography-tandem mass spectrometric method

  Wang, L. Z., Lee, L. S. U., Thuya, W. L., Soon, G. H., Kong, L. R., Nye, P. L., Deoon Lee, E. J., Flexner, C. & Goh, B. C., Feb 1 2011, In: Journal of Mass Spectrometry. 46, 2, p. 202-208 7 p.

  Research output: Contribution to journal › Article › peer-review

  • Plasma (human)
  • Liquid chromatography
  • Raltegravir Potassium
  • liquid chromatography
  • Glucuronides

• Simultaneous measurement of protein oxidation and S-nitrosylation during preconditioning and ischemia/reperfusion injury with resin-assisted capture

  Kohr, M. J., Sun, J., Aponte, A., Wang, G., Gucek, M., Murphy, E. & Steenbergen, C., Feb 18 2011, In: Circulation research. 108, 4, p. 418-426 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Ischemic Preconditioning
  • Reperfusion Injury
  • Reperfusion
  • Protein S
  • Ischemia

• Simultaneous segmentation and inhomogeneity correction in magnetic resonance images

  Li, Y., Hoover-Fong, J., Carrino, J. A. & Mori, S., 2011, 33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS 2011. p. 8045-8048 4 p. 6091984. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Magnetic Resonance Imaging
  • Magnetic resonance
  • Magnetic Resonance Spectroscopy
  • Set theory

• Simultaneous T₂ and lipid quantitation using IDEAL-CPMG

  Janiczek, R. L., Gambarota, G., Sinclair, C. D. J., Yousry, T. A., Thornton, J. S., Golay, X. & Newbould, R. D., Nov 2011, In: Magnetic resonance in medicine. 66, 5, p. 1293-1302 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Fats
  • Lipids
  • Water
  • Inclusion Body Myositis
  • Neuromuscular Diseases

• Simultaneous thrombin and plasmin generation capacities in normal and abnormal states of coagulation and fibrinolysis in children and adults

  Simpson, M. L., Goldenberg, N. A., Jacobson, L. J., Bombardier, C. G., Hathaway, W. E. & Manco-Johnson, M. J., Apr 2011, In: Thrombosis research. 127, 4, p. 317-323 7 p.

  Research output: Contribution to journal › Article › peer-review

  • Fibrinolysin
  • Fibrinolysis
  • Thrombin
  • Child
  • Afibrinogenemia

• Single and multi-finger movements are correlated in neuronal population activities as well as in natural behaviors

  Lim, S. J., You, K. J., Schieber, M. H., Thakor, N. V. & Shin, H. C., Dec 1 2011, 2011 International Symposium on Intelligent Signal Processing and Communications Systems: "The Decade of Intelligent and Green Signal Processing and Communications", ISPACS 2011. 6146138. (2011 International Symposium on Intelligent Signal Processing and Communications Systems: "The Decade of Intelligent and Green Signal Processing and Communications", ISPACS 2011).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Neurons
  • Prosthetics
  • Chemical activation

• Single-breathhold four-dimensional assessment of left ventricular morphological and functional parameters by magnetic resonance imaging using the VAST technique

  Rochitte, C. E., Azevedo, C. F., Rosário, M. A., Siqueira, M. H. R., Monsão, V., Saranathan, M., Foo, T. K., Filho, R. K., Cerri, G. G. & Ramires, J. A. F., 2011, In: Open Cardiovascular Medicine Journal. 5, 1, p. 90-98 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Magnetic Resonance Spectroscopy
  • Magnetic Resonance Imaging
  • Cine Magnetic Resonance Imaging
  • Cardiac Volume
  • Cardiology

• Single-cell gene-expression profiling reveals qualitatively distinct CD8 T cells elicited by different gene-based vaccines

  Flatz, L., Roychoudhuri, R., Honda, M., Filali-Mouhim, A., Goulet, J. P., Kettaf, N., Lin, M., Roederer, M., Haddad, E. K., Sékaly, R. P. & Nabel, G. J., Apr 5 2011, In: Proceedings of the National Academy of Sciences of the United States of America. 108, 14, p. 5724-5729 6 p.

  Research output: Contribution to journal › Article › peer-review

  • Gene Expression Profiling
  • Vaccines
  • T-Lymphocyte Subsets
  • T-Lymphocytes
  • Lymphocytic choriomeningitis virus

• Single-cell persistent activity in anterodorsal thalamus

  Kulkarni, M., Zhang, K. & Kirkwood, A., Jul 12 2011, In: Neuroscience Letters. 498, 3, p. 179-184 6 p.

  Research output: Contribution to journal › Article › peer-review

  • Thalamus
  • Head
  • Direction compound
  • Neurons
  • Anterior Thalamic Nuclei

• Single-center experience with third and fourth kidney transplants

  Kienzl-Wagner, K., Mark, W., Maglione, M., Brandacher, G., Ãllinger, R., Margreiter, R., Pratschke, J. & Bösmüller, C., Aug 1 2011, In: Transplant International. 24, 8, p. 780-786 7 p.

  Research output: Contribution to journal › Article › peer-review

  • Transplants
  • Graft Survival
  • Kidney
  • Kidney Transplantation
  • Delayed Graft Function

• Single-incision laparoscopic cholecystectomy: Lessons learned for success

  Shussman, N., Schlager, A., Elazary, R., Khalaileh, A., Keidar, A., Talamini, M., Horgan, S., Rivkind, A. I. & Mintz, Y., Feb 2011, In: Surgical endoscopy. 25, 2, p. 404-407 4 p.

  Research output: Contribution to journal › Article › peer-review

• Single-molecule analysis of cell-virus binding interactions

  Dobrowsky, T. M. & Wirtz, D., Dec 1 2011, Cell Signaling Reactions: Single-Molecular Kinetic Analysis. Springer Netherlands, p. 153-166 14 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Single Molecule Imaging
  • Single-Cell Analysis
  • Virus Attachment
  • Viruses
  • Molecules

• Single molecule analysis of yeast Rrp44 exonuclease reveals a spring-loaded mechanism of RNA unwinding

  Lee, G., Bratkowski, M. A., Ding, F., Ke, A. & Ha, T., Dec 1 2011, Frontiers in Optics, FiO 2011. (Optics InfoBase Conference Papers).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Single-molecule analysis reveals three phases of DNA degradation by an exonuclease

  Lee, G., Yoo, J., Leslie, B. J. & Ha, T., Jun 2011, In: Nature chemical biology. 7, 6, p. 367-374 8 p.

  Research output: Contribution to journal › Review article › peer-review

  • Exodeoxyribonucleases
  • Exonucleases
  • Base Pairing
  • Fluorescence Resonance Energy Transfer
  • Enzymes

• Single-molecule binding of CD44 to fibrin versus P-selectin predicts their distinct shear-dependent interactions in cancer

  Raman, P. S., Alves, C. S., Wirtz, D. & Konstantopoulos, K., Jun 1 2011, In: Journal of cell science. 124, 11, p. 1903-1910 8 p.

  Research output: Contribution to journal › Article › peer-review

  • P-Selectin
  • Fibrin
  • Tensile Strength
  • Neoplasms
  • Ligands

• Single-molecule FRET: Technique and applications to the studies of molecular machines

  Shi, X. & Ha, T., Jan 1 2011, Molecular Machines in Biology: Workshop of the Cell. Cambridge University Press, p. 4-19 16 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Forster resonance energy transfer
  • Molecules
  • Hydrolysis
  • triphosphoric acid
  • Adenosine

• Single-molecule nanopositioning: Structural transitions of a helicase-DNA complex during ATP hydrolysis

  Balci, H., Arslan, S., Myong, S., Lohman, T. M. & Ha, T., Aug 17 2011, In: Biophysical journal. 101, 4, p. 976-984 9 p.

  Research output: Contribution to journal › Article › peer-review

  • DNA Helicases
  • Hydrolysis
  • Adenosine Triphosphate
  • Nucleic Acid Conformation
  • DNA

• Single-molecule studies of HIV-1 protease catalysis enabled by chemical protein synthesis

  Torbeev, V. Y., Myong, S. A., Ha, T. & Kent, S. B. H., Nov 1 2011, In: Israel Journal of Chemistry. 51, 8-9, p. 960-967 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Human immunodeficiency virus 1 p16 protease
  • Catalysis
  • Molecules
  • Peptides
  • Substrates

• Single-neuron dynamics in human focal epilepsy

  Truccolo, W., Donoghue, J. A., Hochberg, L. R., Eskandar, E. N., Madsen, J. R., Anderson, W. S., Brown, E. N., Halgren, E. & Cash, S. S., May 2011, In: Nature neuroscience. 14, 5, p. 635-643 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Partial Epilepsy
  • Seizures
  • Neurons
  • Homeless Youth
  • Epilepsy

• Single-nucleotide polymorphisms in LPA explain most of the Ancestry-specific variation in Lp(a) levels in African Americans

  Deo, R. C., Wilson, J. G., Xing, C., Lawson, K., Linda Kao, W. H., Reich, D., Tandon, A., Akylbekova, E., Patterson, N., Mosley, T. H., Boerwinkle, E. & Taylor, H. A., 2011, In: PloS one. 6, 1, e14581.

  Research output: Contribution to journal › Article › peer-review

  • African Americans
  • Polymorphism
  • Lipoprotein(a)
  • lipoproteins
  • single nucleotide polymorphism

• Single-session combined photodynamic therapy with verteporfin and intravitreal anti-vascular endothelial growth factor therapy for chronic central serous chorioretinopathy: A pilot study at 12-month follow-up

  Arevalo, J. F. & Espinoza, J. V., Aug 1 2011, In: Graefe's Archive for Clinical and Experimental Ophthalmology. 249, 8, p. 1159-1166 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Verteporfin
  • Central Serous Chorioretinopathy
  • Photochemotherapy
  • Vascular Endothelial Growth Factor A
  • 1-phenyl-3,3-dimethyltriazene

• Single subject task-related BOLD signal artifact in a real-time fMRI feedback paradigm

  Zhang, X., Ross, T. J., Jo Salmeron, B., Yang, S., Yang, Y. & Stein, E. A., Apr 2011, In: Human Brain Mapping. 32, 4, p. 592-600 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Artifacts
  • Magnetic Resonance Imaging
  • Eye Movements
  • Direction compound
  • Echo-Planar Imaging

• Single versus sequential testing with scanning peripheral anterior chamber depth analyser, IOLMaster and anterior segment optical coherence tomography for the detection of narrow angles

  Chang, D. S., Sakata, L. M., Aung, T., He, M. G., Lavanya, R., Kashiwagi, K. & Friedman, D. S., Oct 2011, In: British Journal of Ophthalmology. 95, 10, p. 1410-1414 5 p.

  Research output: Contribution to journal › Article › peer-review

  • Anterior Chamber
  • Optical Coherence Tomography
  • Gonioscopy
  • Sensitivity and Specificity
  • Eye

• Sipuleucel-T immunotherapy for castration-resistant prostate cancer: Editorial comment

  Walsh, P. C., Mar 2011, In: Journal of Urology. 185, 3, p. 897-898 2 p.

  Research output: Contribution to journal › Comment/debate › peer-review

• Sirolimus may be associated with early recurrence of biliary obstruction in liver transplant patients undergoing endoscopic stenting of biliary strictures

  Tabibian, J. H., Yeh, H. C., Singh, V. K., Cengiz-Seval, G., Cameron, A. M. & Gurakar, A., 2011, In: Annals of hepatology. 10, 3, p. 270-276 7 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Sirolimus
  • Pathologic Constriction
  • Liver Transplantation
  • Transplants
  • Recurrence

• Sirolimus or paclitaxel drug eluting stent in left main disease: The winner is⋯

  Navarese, E. P., Kubica, J. & Gurbel, P. A., Nov 3 2011, In: International Journal of Cardiology. 152, 3, p. 387 1 p.

  Research output: Contribution to journal › Article › peer-review

• Sirtuin 1 in lipid metabolism and obesity

  Schug, T. T. & Li, X., May 2011, In: Annals of Medicine. 43, 3, p. 198-211 14 p.

  Research output: Contribution to journal › Article › peer-review

  • Sirtuin 1
  • Lipid Metabolism
  • Obesity
  • Nutrients
  • Liver

• Site-mapping of in vitro S-nitrosation in cardiac mitochondria: Implications for cardioprotection

  Murray, C. I., Kane, L. A., Uhrigshardt, H., Wang, S. B. & Van Eyk, J. E., Mar 2011, In: Molecular and Cellular Proteomics. 10, 3

  Research output: Contribution to journal › Article › peer-review

  • Nitrosation
  • Mitochondria
  • In Vitro Techniques
  • Cysteine
  • Proteins

• Site-specific gene correction of a point mutation in human iPS cells derived from an adult patient with sickle cell disease

  Zou, J., Mali, P., Huang, X., Dowey, S. N. & Cheng, L., Oct 27 2011, In: Blood. 118, 17, p. 4599-4608 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Stem cells
  • Induced Pluripotent Stem Cells
  • Sickle Cell Anemia
  • Point Mutation
  • Genes

• Situational analysis of teaching and learning of medicine and nursing students at Makerere University College of Health Sciences

  Kiguli, S., Baingana, R., Paina, L., Mafigiri, D., Groves, S., Katende, G., Kiguli-Malwadde, E., Kiguli, J., Galukande, M., Roy, M., Bollinger, R. & Pariyo, G., 2011, In: BMC International Health and Human Rights. 11, SUPPL. 1, S3.

  Research output: Contribution to journal › Article › peer-review

  • Nursing Students
  • Teaching
  • Learning
  • Medicine
  • Competency-Based Education