Find Research Outputs

2019

APOL1 renal risk variants promote cholesterol accumulation in tissues and cultured macrophages from APOL1 transgenic mice

Ryu, J. H., Ge, M., Merscher, S., Rosenberg, A., Marco, D., Hila, R., Okamoto, K., Shin, M. K., Hoek, M., Fornoni, A. & Jeffrey, B. K. ID., Apr 1 2019, In : PloS one. 14, 4, e0211559.

Research output: Contribution to journalArticle

Open Access
apolipoproteins
Apolipoproteins
Macrophages
Transgenic Mice
macrophages

Apolipoproteins are a mediator of tissue-specificity in the foreign body response

Sadtler, K., Macisaac, C., Zepeda, F., Doloff, J., Langer, R. S. & Anderson, D. G., Jan 1 2019, Society for Biomaterials Annual Meeting and Exposition 2019: The Pinnacle of Biomaterials Innovation and Excellence - Transactions of the 42nd Annual Meeting. Society for Biomaterials, 1 p. (Transactions of the Annual Meeting of the Society for Biomaterials and the Annual International Biomaterials Symposium; vol. 40).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Organ Specificity
Apolipoproteins
Foreign Bodies
Pathogens
Tissue
Metformin
Platinum
Non-Small Cell Lung Carcinoma
Drug Therapy
Lymphopenia

A population pharmacokinetic analysis shows that arylacetamide deacetylase (AADAC) gene polymorphism and HIV infection affect the exposure of rifapentine

Francis, J., Zvada, S. P., Denti, P., Hatherill, M., Charalambous, S., Mungofa, S., Dawson, R., Dorman, S., Gupte, N., Wiesner, L., Jindani, A., Harrison, T. S., Olagunju, A., Egan, D., Owen, A. & McIlleron, H. M., Apr 1 2019, In : Antimicrobial agents and chemotherapy. e01964-18.

Research output: Contribution to journalArticle

Open Access
rifapentine
HIV Infections
Pharmacokinetics
Population
Genes

Apparent acetaminophen toxicity in a patient with transaldolase deficiency

Lee-Barber, J., English, T. E., Britton, J. F., Sobreira, N., Goldstein, J., Valle, D. & Bjornsson, H. T., Jan 1 2019, JIMD Reports. Springer, p. 9-15 7 p. (JIMD Reports; vol. 44).

Research output: Chapter in Book/Report/Conference proceedingChapter

Transaldolase
Acetaminophen
Toxicity
Liver
Liver Failure
Nutritional Status
Cystic Fibrosis
Feeding Behavior
Child Behavior
Food

Applicability and Cost Implications for Proprotein Convertase Subtilisin/Kexin Type 9 Inhibitors Based on the ODYSSEY Outcomes Trial

Virani, S. S., Akeroyd, J. M., Nambi, V., Michos, E. D., Morris, P. B., Nasir, K., Smith, S. C., Stone, N. J., Petersen, L. A. & Ballantyne, C. M., Jan 15 2019, In : Circulation. 139, 3, p. 410-412 3 p.

Research output: Contribution to journalLetter

Veterans
Cholesterol
Clinical Trials
Costs and Cost Analysis
Proprotein Convertase 9

Application of Curriculum Mapping Concepts to Integrate Multidisciplinary Competencies in the Care of Older Adults in Graduate Nurse Practitioner Curricula

Michael, M., Wilson, C., Jester, D. J., Andel, R., D'Aoust, R., Badana, A. N. S. & Hyer, K., Jan 1 2019, In : Journal of Professional Nursing.

Research output: Contribution to journalArticle

Nurse Practitioners
Geriatrics
Curriculum
Learning
Primary Health Care

Application of Deep Learning to Pancreatic Cancer Detection: Lessons Learned From Our Initial Experience

Chu, L. C. H., Park, S., Kawamoto, S., Wang, Y., Zhou, Y., Shen, W., Zhu, Z., Xia, Y., Xie, L., Liu, F., Yu, Q., Fouladi, D. F., Shayesteh, S., Zinreich, E. S., Graves, J. S., Horton, K. M., Yuille, A. L., Hruban, R. H., Kinzler, K. W., Vogelstein, B. & 1 others, Fishman, E. K., Jan 1 2019, In : Journal of the American College of Radiology.

Research output: Contribution to journalArticle

Application of the incident command system to the hospital biocontainment unit setting

Sauer, L., Romig, M., Andonian, J., Flinn, J. B., Hynes, N. A., Maloney, R., Maragakis, L. & Garibaldi, B. T., Jan 1 2019, In : Health Security. 17, 1, p. 27-34 8 p.

Research output: Contribution to journalArticle

Hospital Units
Pathogens
incident
Emergencies
pathogen

Application of the Milan System for Reporting Submandibular Gland Cytopathology: An international, multi-institutional study

Maleki, Z., Baloch, Z., Lu, R., Shafique, K., Song, S. J., Viswanathan, K., Rao, R. A., Lefler, H., Fatima, A., Wiles, A., Jo, V. Y., Wang, H., Fadda, G., Powers, C. N., Ali, S. Z., Pantanowitz, L., Siddiqui, M. T., Nayar, R., Klijanienko, J., Barkan, G. A. & 7 others, Krane, J. F., Rossi, E. D., Callegari, F., Kholová, I., Bongiovanni, M., Faquin, W. C. & Pusztaszeri, M. P., May 1 2019, In : Cancer Cytopathology. 127, 5, p. 306-315 10 p.

Research output: Contribution to journalArticle

Submandibular Gland
Salivary Glands
Neoplasms
Fine Needle Biopsy
Salivary Gland Neoplasms

Applications of a deep learning method for anti-aliasing and super-resolution in MRI

Zhao, C., Shao, M., Carass, A., Li, H., Dewey, B. E., Ellingsen, L. M., Woo, J., Guttman, M. A., Blitz, A. M., Stone, M., Calabresi, P., Halperin, H. & Prince, J. L., Jan 1 2019, In : Magnetic Resonance Imaging.

Research output: Contribution to journalArticle

Anti-aliasing
Magnetic resonance
Magnetic resonance imaging
Magnetic Resonance Spectroscopy
Learning

Applications of Cardiac MR Imaging in Electrophysiology: Current Status and Future Needs

Okada, D. R. & Wu, K. C-C., Aug 1 2019, In : Magnetic Resonance Imaging Clinics of North America. 27, 3, p. 465-473 9 p.

Research output: Contribution to journalReview article

Electrophysiology
Cardiac Arrhythmias
Therapeutics

Applied Force during Piston Prosthesis Placement in a 3D-Printed Model: Freehand vs Robot-Assisted Techniques

Razavi, C. R., Wilkening, P. R., Yin, R., Lamaison, N., Taylor, R. H., Carey, J. P. & Creighton, F. X., Feb 1 2019, In : Otolaryngology - Head and Neck Surgery (United States). 160, 2, p. 320-325 6 p.

Research output: Contribution to journalArticle

Robotics
Prostheses and Implants
Incus
Microsurgery
Stapes
Open Access
Environmental Health
Lenses
Public Health
Food
Animal Welfare
Anesthesiology

Applying quality improvement methods to neglected conditions: Development of the South Asia Burn Registry (SABR)

Zia, N., Latif, A., Mashreky, S. R., Al-Ibran, E., Hashmi, M., Rahman, A. K. M. F., Khondoker, S., Quraishy, M. S. & Hyder, A. A., Jan 29 2019, In : BMC Research Notes. 12, 1, 64.

Research output: Contribution to journalArticle

Quality Improvement
Registries
Health
Burn Units
Wounds and Injuries

Applying rapid whole-genome sequencing to predict phenotypic antimicrobial susceptibility testing results among carbapenem-resistant klebsiella pneumoniae clinical isolates

Tamma, P., Fan, Y., Bergman, Y., Pertea, G., Kazmi, A. Q., Lewis, S., Carroll, K. C., Schatz, M. C., Timp, W. & Simner, P., Jan 1 2019, In : Antimicrobial Agents and Chemotherapy. 63, 1, e01923-18.

Research output: Contribution to journalArticle

Nanopores
Carbapenems
Klebsiella pneumoniae
Genome
Genes

Applying the Haddon Matrix to evaluate sexual assault interventions on college campuses

Mahoney, P., Gielen, A., Bailey, M. M. & Gabel, C., Jan 1 2019, In : Journal of American College Health.

Research output: Contribution to journalArticle

Environmental Policy
Crime Victims
PubMed
Self Report
Research Design

Applying the model of diffusion of innovations to understand facilitators for the implementation of maternal and neonatal health programmes in rural Uganda

Paina, L., Namazzi, G., Tetui, M., Mayora, C., Kananura, R. M., Kiwanuka, S. N., Waiswa, P., Mutebi, A. & Ekirapa-Kiracho, E., Jun 13 2019, In : Globalization and health. 15, 1, 38.

Research output: Contribution to journalArticle

Open Access
Diffusion of Innovation
Uganda
Health
Public Health Schools
Maternal Mortality
Open Access
Translational Medical Research
Organizations
Psychological Theory
Evidence-Based Practice
Health

Appraisal of hepatitis C viremic donors: How far could we expand the heart donor pool?

Suarez-Pierre, A., Lui, C., Zhou, X., Morales, L. F. & Choi, C. W., Aug 1 2019, In : Journal of Cardiovascular Medicine. 20, 8, p. 572-574 3 p.

Research output: Contribution to journalArticle

Approaches, Progress, and Challenges to Hepatitis C Vaccine Development

Bailey, J., Barnes, E. & Cox, A., Jan 1 2019, In : Gastroenterology. 156, 2, p. 418-430 13 p.

Research output: Contribution to journalArticle

Hepatitis C
Hepacivirus
Vaccines
Virus Diseases
Viral Core Proteins

Approaches for creating comparable measures of alcohol use symptoms: Harmonization with eight studies of criminal justice populations

Hussong, A. M., Gottfredson, N. C., Bauer, D. J., Curran, P. J., Haroon, M., Chandler, R., Kahana, S. Y., Delaney, J. A. C., Altice, F. L., Beckwith, C. G., Feaster, D. J., Flynn, P. M., Gordon, M. S., Knight, K., Kuo, I., Ouellet, L. J., Quan, V. M., Seal, D. W. & Springer, S. A., Jan 1 2019, In : Drug and Alcohol Dependence. 194, p. 59-68 10 p.

Research output: Contribution to journalArticle

Criminal Law
Alcohols
Factor analysis
Population
Statistics
Bloodless Medical and Surgical Procedures
Intraoperative Period
Preoperative Period
Practice Guidelines
Postoperative Period

Approaches to Risk Assessment Among Older Patients With Diabetes

Pilla, S., Schoenborn, N., Maruthur, N. & Huang, E. S., Aug 1 2019, In : Current Diabetes Reports. 19, 8, 59.

Research output: Contribution to journalReview article

Life Expectancy
Guidelines
Patient-Centered Care
Hypoglycemia
Patient Care

Approaches to urinary detection of prostate cancer

Eskra, J. N., Rabizadeh, D., Pavlovich, C., Catalona, W. J. & Luo, J., Jan 1 2019, (Accepted/In press) In : Prostate Cancer and Prostatic Diseases.

Research output: Contribution to journalArticle

Prostatic Neoplasms
Urine
Biomarkers
Neoplasms
Research

Approximations of Shannon mutual information for discrete variables with applications to neural population coding

Huang, W. & Zhang, K., Mar 1 2019, In : Entropy. 21, 3, 243.

Research output: Contribution to journalArticle

Open Access
coding
approximation
Fisher information
divergence
information theory

A practical guide to methods controlling false discoveries in computational biology

Korthauer, K., Kimes, P. K., Duvallet, C., Reyes, A., Subramanian, A., Teng, M., Shukla, C., Alm, E. J. & Hicks, S., Jun 4 2019, In : Genome biology. 20, 1, 118.

Research output: Contribution to journalArticle

Open Access
Computational Biology
bioinformatics
methodology
method
rate
Advance Care Planning
Dementia
Documentation
Physicians
Advance Directives

A pragmatic randomised controlled trial (RCT) and realist evaluation of the interdisciplinary home-bAsed Reablement program (I-HARP) for improving functional independence of community dwelling older people with dementia: An effectiveness-implementation hybrid design

Jeon, Y. H., Simpson, J. M., Low, L. F., Woods, R., Norman, R., Mowszowski, L., Clemson, L., Naismith, S. L., Brodaty, H., Hilmer, S., Amberber, A. M., Gitlin, L. N. & Szanton, S. L., Jul 29 2019, In : BMC Geriatrics. 19, 1, 199.

Research output: Contribution to journalArticle

Open Access
Independent Living
Dementia
Randomized Controlled Trials
Caregivers
Quality of Life

A predictive risk model for nonfatal opioid overdose in a statewide population of buprenorphine patients

Chang, H-Y., Krawczyk, N., Schneider, K. E., Ferris, L., Eisenberg, M., Richards, T. M., Lyons, B. C., Jackson, K., Weiner, J. & Saloner, B., Aug 1 2019, In : Drug and alcohol dependence. 201, p. 127-133 7 p.

Research output: Contribution to journalArticle

Buprenorphine
Opioid Analgesics
Prescriptions
Population
Medicare

A preliminary analysis of interleukin-1 ligands as potential predictive biomarkers of response to cetuximab

Espinosa-Cotton, M., Fertig, E., Stabile, L. P., Gaither-Davis, A., Bauman, J. E., Schmitz, S., Gibson-Corley, K. N., Cheng, Y., Jensen, I. J., Badovinac, V. P., Laux, D. & Simons, A. L., Jul 16 2019, In : Biomarker Research. 7, 1, 14.

Research output: Contribution to journalArticle

Open Access
Biomarkers
Interleukin-1
Ligands
Chemotherapy
Genes

A Primer on Understanding Pediatric Health Care Quality Measurement

Heuer, B., Rankin, A., Reyes, I. & Dihigo, S., Jan 1 2019, In : Journal of Pediatric Health Care.

Research output: Contribution to journalArticle

Quality of Health Care
Pediatrics
Nurses
Clinical Competence
Accreditation
Medicine
Neoplasms
Patient Reported Outcome Measures
Patient Care Management
Patient Care

A Proof-of-Principle, Case-Control Study to Compensate for Potential Carbohydrates in Liquid Antiseizure Drugs in Children on the Ketogenic Diet

Haney, C. A., Charpentier, A., Turner, Z., Bessone, S. K., Doerrer, S. C. & Kossoff, E. H., Jan 1 2019, In : Journal of child neurology.

Research output: Contribution to journalArticle

Ketogenic Diet
Case-Control Studies
Carbohydrates
Tablets
Ketosis

A proposed anti-maladaptive aggression agent classification: improving our approach to treating impulsive aggression

Robb, A. S., Schwabe, S., Ceresoli-Borroni, G., Nasser, A., Yu, C., Marcus, R., Candler, S. A. & Findling, R. L., Jan 1 2019, In : Postgraduate medicine.

Research output: Contribution to journalReview article

Aggression
Pharmaceutical Preparations
Molindone
Therapeutics
United States Food and Drug Administration

A prospective, multi-institution assessment of irreversible electroporation for treatment of locally advanced pancreatic adenocarcinoma: initial outcomes from the AHPBA pancreatic registry

Holland, M. M., Bhutiani, N., Kruse, E. J., Weiss, M. J., Christein, J. D., White, R. R., Huang, K. W. & Martin, R. CG., Jan 1 2019, In : HPB.

Research output: Contribution to journalArticle

Electroporation
Registries
Adenocarcinoma
Pancreatic Neoplasms
Therapeutics

A Prospective, Population-Based Study of Trends in Operative Vaginal Delivery Compared to Cesarean Delivery Rates in Low- and Middle-Income Countries, 2010-2016

Harrison, M. S., Saleem, S., Ali, S., Pasha, O., Chomba, E., Carlo, W. A., Garces, A. L., Krebs, N. F., Hambidge, K. M., Goudar, S. S., Dhaded, S. M., Kodkany, B., Derman, R. J., Patel, A., Hibberd, P. L., Esamai, F., Liechty, E. A., Tshefu, A., Lokangaka, A., Bauserman, M. & 10 others, Bose, C. L., Althabe, F., Belizan, J. M., Buekens, P., Moore, J. L., Wallace, D. D., Miodovnik, M., Koso-Thomas, M., McClure, E. M. & Goldenberg, R. L., Jan 1 2019, In : American journal of perinatology. 36, 7, p. 730-736 7 p.

Research output: Contribution to journalArticle

Population
Guatemala
Zambia
Democratic Republic of the Congo
Kenya
Cranial Irradiation
Small Cell Lung Carcinoma
Brain
Verbal Learning
Cognition

A Prospective Pilot Study of Vascular Assessment of the Upper Extremity With Laser Angiography

Hui-Chou, H. G., Thakkar, M. Y., Means, K. R. & Higgins, J. P., Jan 1 2019, In : Hand.

Research output: Contribution to journalArticle

Upper Extremity
Blood Vessels
Angiography
Lasers
Prospective Studies
Open Angle Glaucoma
Glaucoma
Intraocular Pressure
Therapeutics
Visual Acuity

A prospective study of focal brain atrophy, mobility and fitness

Tian, Q., Resnick, S. M., Davatzikos, C., Erus, G., Simonsick, E. M., Studenski, S. A. & Ferrucci, L., Jul 1 2019, In : Journal of Internal Medicine. 286, 1, p. 88-100 13 p.

Research output: Contribution to journalArticle

Atrophy
Prospective Studies
Brain
Parahippocampal Gyrus
Parietal Lobe

A prospective study of serum metabolites and risk of ischemic stroke

Sun, D., Tiedt, S., Yu, B., Jian, X., Gottesman, R. F., Mosley, T. H., Boerwinkle, E., Dichgans, M. & Fornage, M., Apr 16 2019, In : Neurology. 92, 16, p. e1890-e1898

Research output: Contribution to journalArticle

Open Access
Stroke
Prospective Studies
Serum
Dicarboxylic Acids
Metabolomics

A prospective study of the immune reconstitution inflammatory syndrome (IRIS) in HIV-infected children from high prevalence countries

on behalf of the P1073 team, Jan 1 2019, In : PloS one. 14, 7, e0211155.

Research output: Contribution to journalArticle

Open Access
Immune Reconstitution Inflammatory Syndrome
Pediatrics
Biomarkers
prospective studies
Logistics

A prospective study of the incidence of drug-induced liver injury by the modern volatile anaesthetics sevoflurane and desflurane

Bishop, B., Hannah, N., Doyle, A., Amico, F., Hockey, B., Moore, D., Sood, S., Gorelik, A., Liew, D., Njoku, D. B. & Nicoll, A., Jan 1 2019, In : Alimentary Pharmacology and Therapeutics.

Research output: Contribution to journalArticle

Chemical and Drug Induced Liver Injury
Anesthetics
Prospective Studies
Incidence
Biochemistry

A Prospective Study of the Urinary and Gastrointestinal Microbiome in Prepubertal Males

Kassiri, B., Shrestha, E., Kasprenski, M., Antonescu, C., Florea, L. D., Sfanos, K. & Wang, M. H., Jan 1 2019, In : Urology.

Research output: Contribution to journalArticle

Microbiota
Prospective Studies
Urine
Anti-Bacterial Agents
Ribosomal DNA

A protocol for measuring the impact of a smoke-free housing policy on indoor tobacco smoke exposure

Cardozo, R. A., Feinberg, A., Tovar, A., Vilcassim, M. J. R., Shelley, D., Elbel, B., Kaplan, S., Wyka, K., Rule, A. M., Gordon, T. & Thorpe, L. E., May 30 2019, In : BMC public health. 19, 1, 666.

Research output: Contribution to journalArticle

Open Access
Smoke-Free Policy
Smoke
Tobacco
Tobacco Smoke Pollution
Public Housing

APT-weighted MRI: Techniques, current neuro applications, and challenging issues

Zhou, J., Heo, H. Y., Knutsson, L., Van Zijl, P. C. & Jiang, S., Jan 1 2019, (Accepted/In press) In : Journal of Magnetic Resonance Imaging.

Research output: Contribution to journalArticle

Amides
Protons
Brain Neoplasms
Multiple Sclerosis
Parkinson Disease

A Public BCR Present in a Unique Dual-Receptor-Expressing Lymphocyte from Type 1 Diabetes Patients Encodes a Potent T Cell Autoantigen

Ahmed, R., Omidian, Z., Giwa, A., Cornwell, B., Majety, N., Bell, D. R., Lee, S., Zhang, H., Michels, A., Desiderio, S., Sadegh-Nasseri, S., Rabb, H., Gritsch, S., Suva, M. L., Cahan, P., Zhou, R., Jie, C., Donner, T. W. & Hamad, A. R., May 30 2019, In : Cell. 177, 6, p. 1583-1599.e16

Research output: Contribution to journalArticle

T-cells
Lymphocytes
Autoantigens
Medical problems
Type 1 Diabetes Mellitus