Zhen Zhang

Associate Professor

19982017
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Research Output 1998 2017

Proteome profiling outperforms transcriptome profiling for coexpression based gene function prediction

Wang, J., Ma, Z., Carr, S. A., Mertins, P., Zhang, H., Zhang, Z., Chan, D. W., Ellis, M. J. C., Townsend, R. R., Smith, R. D., McDermott, J. E., Chen, X., Paulovich, A. G., Boja, E. S., Mesri, M., Kinsinger, C. R., Rodriguez, H., Rodland, K. D., Lieblerc, D. C. & Zhang, B. Jan 1 2017 In : Molecular and Cellular Proteomics. 16, 1, p. 121-134 14 p.

Research output: Contribution to journalArticle

Gene Expression Profiling
Proteome
Genes
Messenger RNA
Proteomics

Quality Assessments of Long-Term Quantitative Proteomic Analysis of Breast Cancer Xenograft Tissues

Zhou, J. Y. , Chen, L. , Zhang, B. , Tian, Y. , Liu, T. , Thomas, S. N. , Chan, L. , Schnaubelt, M. , Boja, E. , Hiltke, T. , Kinsinger, C. R. , Rodriguez, H. , Davies, S. R. , Li, S. , Snider, J. E. , Erdmann-Gilmore, P. , Tabb, D. L. , Townsend, R. R. , Ellis, M. J. , Rodland, K. D. & 5 others Smith, R. D., Carr, S. A., Zhang, Z., Chan, D. W. & Zhang, H. Dec 1 2017 In : Journal of Proteome Research. 16, 12, p. 4523-4530 8 p.

Research output: Contribution to journalArticle

Unsaturated polymers
Heterografts
Proteomics
Breast Neoplasms
Liquid Chromatography

An analysis of the sensitivity of proteogenomic mapping of somatic mutations and novel splicing events in cancer

Ruggles, K. V. , Tang, Z. , Wang, X. , Grover, H. , Askenazi, M. , Teubl, J. , Cao, S. , McLellan, M. D. , Clauser, K. R. , Tabb, D. L. , Mertins, P. , Slebos, R. , Erdmann-Gilmore, P. , Li, S. , Gunawardena, H. P. , Xie, L. , Liu, T. , Zhou, J. Y. , Sun, S. , Hoadley, K. A. & 18 others Perou, C. M., Chen, X., Davies, S. R., Maher, C. A., Kinsinger, C. R., Rodland, K. D., Zhang, H., Zhang, Z., Ding, L., Townsend, R. R., Rodriguez, H., Chan, D., Smith, R. D., Liebler, D. C., Carr, S. A., Payne, S., Ellis, M. J. & Fenyo, D. Mar 1 2016 In : Molecular and Cellular Proteomics. 15, 3, p. 1060-1071 12 p.

Research output: Contribution to journalArticle

RNA Sequence Analysis
Mass spectrometry
Tandem Mass Spectrometry
Peptides
Mutation

CD36 Is a Matrix Metalloproteinase-9 Substrate That Stimulates Neutrophil Apoptosis and Removal during Cardiac Remodeling

Deleon-Pennell, K. Y., Tian, Y., Zhang, B., Cates, C. A., Iyer, R. P., Cannon, P., Shah, P., Aiyetan, P., Halade, G. V., Ma, Y., Flynn, E., Zhang, Z., Jin, Y. F., Zhang, H. & Lindsey, M. L. Feb 1 2016 In : Circulation: Cardiovascular Genetics. 9, 1, p. 14-25 12 p.

Research output: Contribution to journalArticle

Matrix Metalloproteinase 9
Neutrophils
Apoptosis
Myocardial Infarction
Ventricular Remodeling

Comprehensive analysis of protein glycosylation by solid-phase extraction of N-linked glycans and glycosite-containing peptides

Sun, S., Shah, P., Eshghi, S. T., Yang, W., Trikannad, N., Yang, S., Chen, L., Aiyetan, P., Höti, N., Zhang, Z., Chan, D. W. & Zhang, H. Jan 1 2016 In : Nature Biotechnology. 34, 1, p. 84-88 5 p.

Research output: Contribution to journalArticle

Glycosylation
Glycoproteins
Solid Phase Extraction
Peptides
Polysaccharides