Sean Zhang

Research output

Research output per year 1999 2012 2013 2014 2015 2020 2021 2023

• 95 Article
• 6 Review article
• 4 Comment/debate
• 4 Letter
• 3 More
  • 1 Conference contribution
  • 1 Editorial
  • 1 Short survey

Research output per year

Research output per year

Search results

• 2023

  Boosting of Voriconazole Levels With Omeprazole, A CYP450 2C19 Inhibitor

  Hsu, A. J., Lee, C. K. K., Mcateer, J., Zhang, S. X. & Tamma, P. D., Jun 1 2023, In: Pediatric Infectious Disease Journal. 42, 6, p. 485-488 4 p.

  Research output: Contribution to journal › Article › peer-review

  • Voriconazole 100%
  • Omeprazole 95%
  • Cytochrome P-450 CYP2C19 Inhibitors 35%
  • Fusariosis 31%
  • Child 17%

• Coronavirus Disease 2019–Associated Pulmonary Aspergillosis: A Noninvasive Screening Model for Additional Diagnostics

  Permpalung, N., Chiang, T. P. Y., Avery, R. K., Ostrander, D., Datta, K., Segev, D. L., Durand, C. M., Zhang, S. X., Massie, A. B. & Marr, K. A., Apr 1 2023, In: Open Forum Infectious Diseases. 10, 4, ofad155.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Pulmonary Aspergillosis 100%
  • Coronavirus 87%
  • Area Under Curve 12%
  • Hematologic Neoplasms 7%
  • Multiple Myeloma 7%

• Dual Disseminated Aspergillosis and Mucormycosis Diagnosed at Autopsy: A Report of Two Cases of Coinfection and a Review of the Literature

  Murray, J., Lu, Z. A., Miller, K., Meadows, A., Totten, M. & Zhang, S. X., Mar 2023, In: Journal of Fungi. 9, 3, 357.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • aspergillosis 100%
  • Mucormycosis 98%
  • histology 87%
  • Aspergillosis 84%
  • mixed infection 75%

• Invasive fungal infections after respiratory viral infections in lung transplant recipients are associated with lung allograft failure and chronic lung allograft dysfunction within 1 year

  Permpalung, N., Liang, T., Gopinath, S., Bazemore, K., Mathew, J., Ostrander, D., Durand, C. M., Shoham, S., Zhang, S. X., Marr, K. A., Avery, R. K. & Shah, P. D., Jul 2023, In: Journal of Heart and Lung Transplantation. 42, 7, p. 953-963 11 p.

  Research output: Contribution to journal › Article › peer-review

  • Invasive Fungal Infections 100%
  • Respiratory Tract Infections 71%
  • Transplant Recipients 71%
  • Allografts 67%
  • Virus Diseases 56%

• Vaginal Candida albicans: High Frequency of in Vitro Fluconazole Resistance in a Select Population - A Brief Note

  Agrawal, P., Yazdy, G., Ghanem, K. G., Handa, V. L., Schumacher, C. M., Sobel, J. D., Zhang, S. X. & Tuddenham, S., Feb 1 2023, In: Sexually transmitted diseases. 50, 2, p. 121-123 3 p.

  Research output: Contribution to journal › Article › peer-review

  • Fluconazole 100%
  • Candida albicans 87%
  • Demography 55%
  • Prospective Studies 55%
  • In Vitro Techniques 37%
• 2022

  A Portable Droplet Magnetofluidic Device for Point-of-Care Detection of Multidrug-Resistant Candida auris

  Lee, P. W., Totten, M., Chen, L., Chen, F. E., Trick, A. Y., Shah, K., Ngo, H. T., Jin, M., Hsieh, K., Zhang, S. X. & Wang, T. H., Mar 24 2022, In: Frontiers in Bioengineering and Biotechnology. 10, 826694.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Candida 100%
  • Point-of-Care Systems 69%
  • Nucleic acids 59%
  • Nucleic Acid 51%
  • Equipment and Supplies 36%

• Biochemical Analysis of CaurSOD4, a Potential Therapeutic Target for the Emerging Fungal Pathogen Candida auris

  Chandler, C. E., Hernandez, F. G., Totten, M., Robinett, N. G., Schatzman, S. S., Zhang, S. X. & Culotta, V. C., Mar 11 2022, In: ACS Infectious Diseases. 8, 3, p. 584-595 12 p.

  Research output: Contribution to journal › Article › peer-review

  • Candida 100%
  • Superoxide Dismutase 89%
  • Superoxide Dismutase-1 61%
  • Superoxides 48%
  • Enzymes 26%

• Characterizing the microbiota of instrumentation in ophthalmology clinics during and beyond the COVID-19 pandemic

  Mahjoub, H., Zhang, S. X., Wang, J., Memon, W., Mostafa, H. & Breazzano, M. P., Aug 2022, In: Graefe's Archive for Clinical and Experimental Ophthalmology. 260, 8, p. 2585-2590 6 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • SARS Virus 100%
  • Pandemics 72%
  • Ophthalmology 70%
  • Microbiota 67%
  • Disinfection 53%

• Coronavirus Disease 2019-Associated Pulmonary Aspergillosis in Mechanically Ventilated Patients

  Permpalung, N., Chiang, T. P. Y., Massie, A. B., Zhang, S. X., Avery, R. K., Nematollahi, S., Ostrander, D., Segev, D. L. & Marr, K. A., Jan 1 2022, In: Clinical Infectious Diseases. 74, 1, p. 83-91 9 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Pulmonary Aspergillosis 100%
  • Coronavirus 87%
  • Multiple Myeloma 7%
  • Vascular Diseases 7%
  • Critical Illness 7%

• Development of an Interferon-Gamma Release Assay (IGRA) to Aid Diagnosis of Histoplasmosis

  Datta, K., LaRue, R., Permpalung, N., Das, S., Zhang, S., Steinke, S. M., Bushkin, Y., Nosanchuk, J. D. & Marr, K. A., Oct 2022, In: Journal of clinical microbiology. 60, 10

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Interferon-gamma Release Tests 100%
  • Histoplasmosis 91%
  • Enzyme-Linked Immunospot Assay 45%
  • Antigens 32%
  • Confidence Intervals 30%

• Performance of a Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry Testing Algorithm for the Rapid Identification of Clinical Filamentous Molds

  Fissel, J. A., Holdren-Serrell, C. K., Memon, W. & Zhang, S. X., Jun 15 2022, In: Frontiers in Cellular and Infection Microbiology. 12, 915049.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Mass Spectrometry 100%
  • Fungi 99%
  • Lasers 89%
  • Mycology 32%
  • Microbiology 23%
• 2021

  A Case of Scedosporium aurantiacum Infection in the United States

  Mizusawa, M., Totten, M. & Zhang, S. X., Mar 2021, In: Mycopathologia. 186, 1, p. 127-130 4 p.

  Research output: Contribution to journal › Article › peer-review

  • Scedosporium 100%
  • Antifungal Agents 48%
  • infection 32%
  • immunocompromised population 31%
  • Infections 29%

• A Comprehensive Evaluation of Risk Factors for Pneumocystis jirovecii Pneumonia in Adult Solid Organ Transplant Recipients: A Systematic Review and Meta-analysis

  Permpalung, N., Kittipibul, V., Mekraksakit, P., Rattanawong, P., Nematollahi, S., Zhang, S. X. & Steinke, S. M., Oct 1 2021, In: Transplantation. 105, 10, p. 2291-2306 16 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Transplant Recipients 74%
  • Meta-Analysis 59%
  • Systematic Reviews 59%
  • Odds Ratio 51%
  • Transplants 50%

• All you need to know and more about the diagnosis and management of rare mold infections

  Hoenigl, M., Levitz, S. M., Schuetz, A. N., Zhang, S. X. & Cornely, O. A., 2021, In: mBio. 12, 1, p. 1-4 4 p., e02920-20.

  Research output: Contribution to journal › Article › peer-review

  • Fungi 100%
  • Mycology 99%
  • Infections 53%
  • Microbiology 47%
  • Mucorales 35%

• All you need to know and more about the diagnosis and management of rare yeast infections

  Sprute, R., Cornely, O. A., Chen, S. C. A., Seidel, D., Schuetz, A. N. & Zhang, S. X., Aug 2021, In: mBio. 12, 4, e01594-21.

  Research output: Contribution to journal › Comment/debate › peer-review

  Open Access

  • Mycology 100%
  • Yeasts 72%
  • Infections 42%
  • Geotrichum 37%
  • Trichosporon 33%

• Aspergillosis complicating severe coronavirus disease

  Marr, K. A., Platt, A., Tornheim, J. A., Zhang, S. X., Datta, K., Cardozo, C. & Garcia-Vidal, C., Jan 2021, In: Emerging infectious diseases. 27, 1, p. 18-25 8 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Pulmonary Aspergillosis 100%
  • Coronavirus 87%
  • Aspergillosis 82%
  • Virus Diseases 25%
  • Neutropenia 17%
  12 Scopus citations

• Aspergillus lentulus: An Under-recognized Cause of Antifungal Drug-Resistant Aspergillosis

  Nematollahi, S., Permpalung, N., Zhang, S. X., Morales, M. & Marr, K. A., Aug 1 2021, In: Open Forum Infectious Diseases. 8, 8, ofab392.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Azoles 100%
  • Aspergillosis 93%
  • Aspergillus 89%
  • In Vitro Techniques 34%
  • Pharmaceutical Preparations 32%

• Challenges with Utilizing the 1,3-Beta-D-Glucan and Galactomannan Assays To Diagnose Invasive Mold Infections in Immunocompromised Children

  Hsu, A. J., Tamma, P. D. & Zhang, S. X., Aug 2021, In: Journal of clinical microbiology. 59, 9, e03276-20.

  Research output: Contribution to journal › Review article › peer-review

  • polyglucosan 100%
  • galactomannan 97%
  • beta-Glucans 88%
  • Fungi 59%
  • Infections 31%

• COVID-associated pulmonary aspergillosis in the United States: Is it rare or have we missed the diagnosis?

  The Fungal Diagnostic Laboratories Consortium (FDLC), Oct 2021, In: Journal of clinical microbiology. 59, 10, e01135-21.

  Research output: Contribution to journal › Article › peer-review

  • Pulmonary Aspergillosis 100%
  • Missed Diagnosis 90%
  • Coronavirus 87%
  • galactomannan 37%
  • Intensive Care Units 31%

• MAGNETOFLUIDIC-ENABLED POINT-OF-CARE DETECTION OF MULTI-DRUG RESISTANT CANDIDA AURIS IN < 30 MINUTES

  Lee, P. W., Totten, M., Shah, K., Chen, F. E., Chen, L., Trick, A. Y., Zhang, S. X., Hsieh, K. & Wang, T. H., 2021, MicroTAS 2021 - 25th International Conference on Miniaturized Systems for Chemistry and Life Sciences. Chemical and Biological Microsystems Society, p. 771-772 2 p. (MicroTAS 2021 - 25th International Conference on Miniaturized Systems for Chemistry and Life Sciences).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Candida 100%
  • Screening 56%
  • Sample Preparation 51%
  • Health 44%
  • Liquids 40%

• Phylogenomic analysis of a 55.1-kb 19-gene dataset resolves a monophyletic fusarium that includes the fusarium solani species complex

  Geiser, D. M., Al-Hatmi, A. M. S., Aoki, T., Arie, T., Balmas, V., Barnes, I., Bergstrom, G. C., Bhattacharyya, M. K., Blomquist, C. L., Bowden, R. L., Brankovics, B., Brown, D. W., Burgess, L. W., Bushley, K., Busman, M., Cano-Lira, J. F., Carrillo, J. D., Chang, H. X., Chen, C. Y., Chen, W., & 148 othersChilvers, M., Chulze, S., Coleman, J. J., Cuomo, C. A., Wilhelm de Beer, Z., Sybren de Hoog, G., Castillo-Munera, J. D., Del Ponte, E. M., Dieguez-Uribeondo, J., Pietro, A. D., Edel-Hermann, V., Elmer, W. H., Epstein, L., Eskalen, A., Esposto, M. C., Everts, K. L., Fernandez-Pavıa, S. P., da Silva, G. F., Foroud, N. A., Fourie, G., Frandsen, R. J. N., Freeman, S., Freitag, M., Frenkel, O., Fuller, K. K., Gagkaeva, T., Gardiner, D. M., Glenn, A. E., Gold, S. E., Gordon, T. R., Gregory, N. F., Gryzenhout, M., Guarro, J., Gugino, B. K., Gutierrez, S., Hammond-Kosack, K. E., Harris, L. J., Homa, M., Hong, C. F., Hornok, L., Huang, J. W., Ilkit, M., Jacobs, A., Jacobs, K., Jiang, C., del Mar Jimenez-Gasco, M., Kang, S., Kasson, M. T., Kazan, K., Kennell, J. C., Kim, H. S., Corby Kistler, H., Kuldau, G. A., Kulik, T., Kurzai, O., Laraba, I., Laurence, M. H., Lee, T., Lee, Y. W., Lee, Y. H., Leslie, J. F., Liew, E. C. Y., Lofton, L. W., Logrieco, A. F., Lopez-Berges, M. S., Luque, A. G., Lysøe, E., Ma, L. J., Marra, R. E., Martin, F. N., May, S. R., McCormick, S. P., McGee, C., Meis, J. F., Migheli, Q., Mohamed Nor, N. M. I., Monod, M., Moretti, A., Mostert, D., Mule, G., Munaut, F., Munkvold, G. P., Nicholson, P., Nucci, M., O’Donnell, K., Pasquali, M., Pfenning, L. H., Prigitano, A., Proctor, R. H., Ranque, S., Rehner, S. A., Rep, M., Rodrıguez-Alvarado, G., Rose, L. J., Roth, M. G., Ruiz-Roldan, C., Saleh, A. A., Salleh, B., Sang, H., Scandiani, M. M., Scauflaire, J., Schmale, D. G., Short, D. P. G., Sisic, A., Smith, J. A., Smyth, C. W., Son, H., Spahr, E., Stajich, J. E., Steenkamp, E., Steinberg, C., Subramaniam, R., Suga, H., Summerell, B. A., Susca, A., Swett, C. L., Toomajian, C., Torres-Cruz, T. J., Tortorano, A. M., Urban, M., Vaillancourt, L. J., Vallad, G. E., van der Lee, T. A. J., Vanderpool, D., van Diepeningen, A. D., Vaughan, M. M., Venter, E., Vermeulen, M., Verweij, P. E., Viljoen, A., Waalwijk, C., Wallace, E. C., Walther, G., Wang, J., Ward, T. J., Wickes, B. L., Wiederhold, N. P., Wingfield, M. J., Wood, A. K. M., Xu, J. R., Yang, X. B., Yli-Mattila, T., Yun, S. H., Zakaria, L., Zhang, H., Zhang, N., Zhang, S. X. & Zhang, X., Jul 2021, In: Phytopathology. 111, 7, p. 1064-1079 16 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Fusarium solani 100%
  • Fusarium 79%
  • Neocosmospora 28%
  • genes 28%
  • monophyly 15%

• Recognition of Diagnostic Gaps for Laboratory Diagnosis of Fungal Diseases: Expert Opinion from the Fungal Diagnostics Laboratories Consortium (FDLC)

  Zhang, S. X., Babady, N. E., Hanson, K. E., Harrington, A. T., Larkin, P. M. K., Leal, S. M., Luethy, P. M., Martin, I. W., Pancholi, P., Procop, G. W., Riedel, S., Seyedmousavi, S., Sullivan, K. V., Walsh, T. J. & Lockhart, S. R., Jun 2021, In: Journal of clinical microbiology. 59, 7, e01784-20.

  Research output: Contribution to journal › Article › peer-review

  • Clinical Laboratory Techniques 100%
  • Expert Testimony 93%
  • Mycoses 90%
  • Fungi 20%
  • Mucorales 18%
• 2020

  Activity of Various Essential Oils Against Clinical Dermatophytes of Microsporum and Trichophyton

  Parrish, N., Fisher, S. L., Gartling, A., Craig, D., Boire, N., Khuvis, J., Riedel, S. & Zhang, S., Oct 16 2020, In: Frontiers in Cellular and Infection Microbiology. 10, 545913.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Microsporum 100%
  • Arthrodermataceae 92%
  • Trichophyton 91%
  • Volatile Oils 84%
  • Cassia 36%

• A multicenter, longitudinal cohort study of cryptococcosis in human immunodeficiency virus-negative people in the United States

  Marr, K. A., Sun, Y., Spec, A., Lu, N., Panackal, A., Bennett, J., Pappas, P., Ostrander, D., Datta, K., Zhang, S. X. & Williamson, P. R., Jan 15 2020, In: Clinical Infectious Diseases. 70, 2, p. 252-261 10 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Cryptococcosis 100%
  • Longitudinal Studies 63%
  • Mental Status and Dementia Tests 53%
  • HIV 52%
  • Cohort Studies 52%
  17 Scopus citations

• Antifungal susceptibility profiles and drug resistance mechanisms of clinical lomentospora prolificans isolates

  Wu, Y., Grossman, N., Totten, M., Memon, W., Fitzgerald, A., Ying, C. & Zhang, S. X., Oct 2020, In: Antimicrobial agents and chemotherapy. 64, 11, e00318.

  Research output: Contribution to journal › Article › peer-review

  • Echinocandins 100%
  • Azoles 67%
  • Drug Resistance 65%
  • Amino Acids 49%
  • Terbinafine 49%
  2 Scopus citations

• Development and Evaluation of a Fully Automated Molecular Assay Targeting the Mitochondrial Small Subunit rRNA Gene for the Detection of Pneumocystis jirovecii in Bronchoalveolar Lavage Fluid Specimens

  Liu, B., Totten, M., Nematollahi, S., Datta, K., Memon, W., Marimuthu, S., Wolf, L. A., Carroll, K. C. & Zhang, S. X., Dec 2020, In: Journal of Molecular Diagnostics. 22, 12, p. 1482-1493 12 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Pneumocystis carinii 100%
  • Bronchoalveolar Lavage Fluid 81%
  • rRNA Genes 78%
  • Polymerase Chain Reaction 44%
  • Antibodies 20%

• Erratum: Phylogeny and identification of nocardia species on the basis of multilocus sequence analysis (Journal of clinical microbiology(2010)48: 12(4525-4533)Doi:10.1128/JCM.00883-10)

  McTaggart, L. R., Richardson, S. E., Witkowska, M. & Zhang, S. X., Aug 2020, In: Journal of clinical microbiology. 58, 8, e00961-20.

  Research output: Contribution to journal › Comment/debate › peer-review

  Open Access

  • Nocardia 100%
  • Multilocus Sequence Typing 93%
  • Phylogeny 86%
  • Microbiology 76%

• Evaluation of a PCR-electrospray ionization mass spectrometry platform for detection and identification of fungal pathogens directly from prospectively collected bronchoalveolar lavage specimens

  Jia, B., Lovari, R., Miller, H., Metzgar, D., Massire, C., Carolan, H., Toleno, D., D'Alessio, F., Rothman, R., Blyn, L. B. & Zhang, S. X., May 2020, In: Diagnostic Microbiology and Infectious Disease. 97, 1, 114988.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Electrospray Ionization Mass Spectrometry 100%
  • Bronchoalveolar Lavage 78%
  • Mycoses 73%
  • Invasive Fungal Infections 62%
  • Polymerase Chain Reaction 42%
  1 Scopus citations

• In vitro antifungal susceptibility of the emerging multidrug- resistant pathogen candida auris to miltefosine alone and in combination with amphotericin B

  Wu, Y., Totten, M., Memon, W., Ying, C. & Zhang, S. X., Jan 27 2020, In: Antimicrobial agents and chemotherapy. 64, 2, e02063.

  Research output: Contribution to journal › Letter › peer-review
  8 Scopus citations

• Multicenter evaluation of a PCR-based digital microfluidics and electrochemical detection system for the rapid identification of 15 fungal pathogens directly from positive blood cultures

  Zhang, S. X., Carroll, K. C., Lewis, S., Totten, M., Mead, P., Samuel, L., Steed, L. L., Nolte, F. S., Thornberg, A., Reid, J. L., Whitfiel, N. N. & Babady, N. E., May 2020, In: Journal of clinical microbiology. 58, 5, e02096-19.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Microfluidics 100%
  • Blood Culture 85%
  • Polymerase Chain Reaction 49%
  • Candida 17%
  • Standard of Care 16%
  4 Scopus citations

• No to neocosmospora: Phylogenomic and practical reasons for continued inclusion of the fusarium solani species complex in the genus fusarium

  O'Donnell, K., Al-Hatmi, A. M. S., Aoki, T., Brankovics, B., Cano-Lira, J. F., Coleman, J. J., de Hoog, G. S., Di Pietro, A., Frandsen, R. J. N., Geiser, D. M., Gibas, C. F. C., Guarro, J., Kim, H. S., Kistler, H. C., Laraba, I., Leslie, J. F., López-Berges, M. S., Lysøe, E., Meis, J. F., Monod, M., & 17 othersProctor, R. H., Rep, M., Ruiz-Roldán, C., Šišić, A., Stajich, J. E., Steenkamp, E. T., Summerell, B. A., van der Lee, T. A. J., van Diepeningen, A. D., Verweij, P. E., Waalwijk, C., Ward, T. J., Wickes, B. L., Wiederhold, N. P., Wingfield, M. J., Zhang, N. & Zhang, S. X., Sep 1 2020, In: mSphere. 5, 5, e00810.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Fusarium 100%
  • Phylogeny 91%
  • Names 31%
  • Fusariosis 17%
  • Netherlands 10%
  8 Scopus citations

• TSPO deficiency induces mitochondrial dysfunction, leading to hypoxia, angiogenesis, and a growth-promoting metabolic shift toward glycolysis in glioblastoma

  Fu, Y., Wang, D., Wang, H., Cai, M., Li, C., Zhang, X., Chen, H., Hu, Y., Zhang, X., Ying, M., He, W. & Zhang, J., Feb 20 2020, In: Neuro-oncology. 22, 2, p. 240-252 13 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Protein Deficiency 100%
  • Glycolysis 80%
  • Glioblastoma 75%
  • Glioma 70%
  • Hypoxia 60%
• 2019

  Angioinvasive, cutaneous infection due to Colletotrichum siamense in a stem cell transplant recipient: Report and review of prior cases

  Werbel, W. A., Baroncelli, R., Shoham, S. & Zhang, S. X., Oct 1 2019, In: Transplant Infectious Disease. 21, 5, e13153.

  Research output: Contribution to journal › Article › peer-review

  • Colletotrichum 100%
  • Transplant Recipients 52%
  • Stem Cells 41%
  • Transplants 35%
  • Skin 30%
  1 Scopus citations

• Closing the brief case: Laryngeal blastomycosis involving a vocal cord implant

  Fenwick, A. J., McKittrick, N. D. & Zhang, S. X., 2019, In: Journal of clinical microbiology. 57, 11, e00412-19.

  Research output: Contribution to journal › Comment/debate › peer-review

  Open Access

• Disseminated sporotrichosis following iatrogenic immunosuppression for suspected pyoderma gangrenosum

  White, M., Adams, LT. T., Phan, C., Erdag, G., Totten, M., Lee, R., Lu, X., Mehta, S., Miller, L. S. & Zhang, S. X., Nov 2019, In: The Lancet Infectious Diseases. 19, 11, p. e385-e391

  Research output: Contribution to journal › Review article › peer-review

  • Sporotrichosis 100%
  • Pyoderma Gangrenosum 93%
  • Immunosuppression 60%
  • Fungi 23%
  • Skin 21%
  3 Scopus citations

• Multicenter Study Demonstrates Standardization Requirements for Mold Identification by MALDI-TOF MS

  Lau, A. F., Walchak, R. C., Miller, H. B., Slechta, E. S., Kamboj, K., Riebe, K., Robertson, A. E., Gilbreath, J. J., Mitchell, K. F., Wallace, M. A., Bryson, A. L., Balada-Llasat, J. M., Bulman, A., Buchan, B. W., Burnham, C. A. D., Butler-Wu, S., Desai, U., Doern, C. D., Hanson, K. E., Henderson, C. M., & 10 othersKostrzewa, M., Ledeboer, N. A., Maier, T., Pancholi, P., Schuetz, A. N., Shi, G., Wengenack, N. L., Zhang, S. X., Zelazny, A. M. & Frank, K. M., Sep 20 2019, In: Frontiers in Microbiology. 10, 2098.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Matrix-Assisted Laser Desorption-Ionization Mass Spectrometry 100%
  • Fungi 75%
  • Multicenter Studies 72%
  • Databases 22%
  • Yeasts 15%
  15 Scopus citations

• Pleural fluid secondary to pulmonary cryptococcal infection: A case report and review of the literature

  Zhang, Y., Zhang, S. X., Trivedi, J., Toll, A. D., Brahmer, J., Hales, R., Bonerigo, S., Zeng, M., Li, H. & Yung, R. C., Aug 12 2019, In: BMC infectious diseases. 19, 1, 710.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Lung 100%
  • Infections 89%
  • Pleural Effusion 84%
  • Cryptococcosis 69%
  • Fluconazole 61%
  2 Scopus citations

• The brief case: Laryngeal blastomycosis involving a vocal

  Fenwick, A. J., McKittrick, N. D. & Zhang, S. X., 2019, In: Journal of clinical microbiology. 57, 11, e00409-19.

  Research output: Contribution to journal › Article › peer-review

  Open Access
• 2018

  Current progress and future opportunities in applications of bioinformatics for biodefense and pathogen detection: Report from the Winter Mid-Atlantic Microbiome Meet-up, College Park, MD, January 10, 2018

  Meisel, J. S., Nasko, D. J., Brubach, B., Cepeda-Espinoza, V., Chopyk, J., Corrada-Bravo, H., Fedarko, M., Ghurye, J., Javkar, K., Olson, N. D., Shah, N., Allard, S. M., Bazinet, A. L., Bergman, N. H., Brown, A., Caporaso, J. G., Conlan, S., Diruggiero, J., Forry, S. P., Hasan, N. A., & 16 othersKralj, J., Luethy, P. M., Milton, D. K., Ondov, B. D., Preheim, S., Ratnayake, S., Rogers, S. M., Rosovitz, M. J., Sakowski, E. G., Schliebs, N. O., Sommer, D. D., Ternus, K. L., Uritskiy, G., Zhang, S. X., Pop, M. & Treangen, T. J., Nov 5 2018, In: Microbiome. 6, 1, 197.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Microbiota 100%
  • Computational Biology 95%
  • Metagenomics 62%
  • Communicable Diseases 43%
  • Information Dissemination 29%
  2 Scopus citations

• Single academic center experience of unrestricted β-d-glucan implementation

  Fabre, V., Markou, T., Demallie, K., Mehta, S., Shoham, S., Tamma, P. D., Zhang, S. & Cosgrove, S. E., Sep 1 2018, In: Open Forum Infectious Diseases. 5, 9, ofy195.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Glucans 100%
  • Mycoses 76%
  • Causality 69%
  • Inpatients 60%
  • Serum 34%
  5 Scopus citations
• 2017

  Can multidrug-resistant candida auris be reliably identified in clinical microbiology laboratories?

  Mizusawa, M., Miller, H., Green, R., Lee, R., Durante, M., Perkins, R., Hewitt, C., Simner, P. J., Carroll, K. C., Hayden, R. T. & Zhang, S. X., Feb 2017, In: Journal of clinical microbiology. 55, 2, p. 638-640 3 p.

  Research output: Contribution to journal › Short survey › peer-review

  Open Access
  127 Scopus citations

• Fatal disseminated Rasamsonia infection in cystic fibrosis post-lung transplantation

  Hong, G., White, M., Lechtzin, N., West, N. E., Avery, R., Miller, H., Lee, R., Lovari, R. J., Massire, C., Blyn, L. B., Liang, X., Sutton, D. A., Fu, J., Wickes, B. L., Wiederhold, N. P. & Zhang, S. X., Mar 1 2017, In: Journal of Cystic Fibrosis. 16, 2, p. e3-e7

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Lung Transplantation 100%
  • Cystic Fibrosis 84%
  • Mycoses 52%
  • Invasive Fungal Infections 44%
  • Infections 41%
  15 Scopus citations

• First draft genome sequence of the pathogenic fungus Lomentospora prolificans (formerly Scedosporium prolificans)

  Luo, R., Zimin, A., Workman, R., Fan, Y., Pertea, G., Grossman, N., Wear, M. P., Jia, B., Miller, H., Casadevall, A., Timp, W., Zhang, S. X. & Salzberg, S. L., Nov 1 2017, In: G3: Genes, Genomes, Genetics. 7, 11, p. 3831-3836 6 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Scedosporium 100%
  • Nanopores 99%
  • Chromosomes, Human, Pair 11 82%
  • Fungi 57%
  • Gels 52%
  6 Scopus citations

• Multiplexed analysis of fixed tissue RNA using Ligation in situ Hybridization

  Credle, J. J., Itoh, C. Y., Yuan, T., Sharma, R., Scott, E. R., Workman, R. E., Fan, Y., Housseau, F., Llosa, N. J., Bell, W. R., Miller, H., Zhang, S. X., Timp, W. & Larman, H. B., Aug 21 2017, In: Nucleic acids research. 45, 14, p. E128

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • In Situ Hybridization 100%
  • Ligation 96%
  • Paraffin Embedding 95%
  • RNA 76%
  • Formaldehyde 58%
  4 Scopus citations

• Saccharomyces boulardii probiotic-associated fungemia: questioning the safety of this preventive probiotic's use

  Martin, I. W., Tonner, R., Trivedi, J., Miller, H., Lee, R., Liang, X., Rotello, L., Isenbergh, E., Anderson, J., Perl, T. & Zhang, S. X., Mar 1 2017, In: Diagnostic Microbiology and Infectious Disease. 87, 3, p. 286-288 3 p.

  Research output: Contribution to journal › Article › peer-review

  • Saccharomyces boulardii 100%
  • Fungemia 89%
  • Probiotics 66%
  • Yeasts 50%
  • Biological Therapy 36%
  21 Scopus citations

• Use of selective fungal culture media increases rates of detection of fungi in the respiratory tract of cystic fibrosis patients

  Hong, G., Miller, H. B., Allgood, S., Lee, R., Lechtzin, N. & Zhang, S. X., Apr 2017, In: Journal of clinical microbiology. 55, 4, p. 1122-1130 9 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Cystic Fibrosis 100%
  • Respiratory System 96%
  • Culture Media 93%
  • Fungi 92%
  • Agar 44%
  24 Scopus citations
• 2016

  Current laboratory approaches to diagnosis of CNS fungal infections

  Lyons, J. L. & Zhang, S. X., 2016, In: Future microbiology. 11, 2, p. 175-177 3 p.

  Research output: Contribution to journal › Comment/debate › peer-review
  9 Scopus citations

• Drone transport of microbes in blood and sputum laboratory specimens

  Amukele, T. K., Street, J., Carroll, K., Miller, H. & Zhang, S. X., Oct 2016, In: Journal of clinical microbiology. 54, 10, p. 2622-2625 4 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Blood Culture 100%
  • Sputum 96%
  • Mass Spectrometry 87%
  • Lasers 78%
  21 Scopus citations

• From suspected Creutzfeldt-Jakob disease to confirmed histoplasma meningitis

  Batra, V., Khararjian, A., Wheat, J., Zhang, S., Crain, B. & Baras, A., 2016, In: BMJ case reports. 2016, 214937.

  Research output: Contribution to journal › Article › peer-review

  • Histoplasma 100%
  • Creutzfeldt-Jakob Syndrome 91%
  • Meningitis 71%
  • Spinal Puncture 42%
  • Ataxia 37%
  3 Scopus citations

• Potent inhibition of pseudogymnoascus destructans, the causative agent of white-nose syndrome in bats, by cold-pressed, terpeneless, Valencia orange oil

  Boire, N., Zhang, S., Khuvis, J., Lee, R., Rivers, J., Crandall, P., Kevin Keel, M. & Parrish, N., Feb 1 2016, In: PloS one. 11, 2, e0148473.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • orange oil 100%
  • Cold Temperature 48%
  • Nose 43%
  • Ecosystem 39%
  • Fungi 32%
  11 Scopus citations