Sean Dixon Taverna

Associate Professor

20012019

Research output per year

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Research Output

2019

Proteomic characterization of the arsenic response locus in S. cerevisiae

West, K. L., Byrum, S. D., Mackintosh, S. G., Edmondson, R. D., Taverna, S. D. & Tackett, A. J., Jan 1 2019, In : Epigenetics.

Research output: Contribution to journalArticle

Sex differences in gene regulation in the dorsal root ganglion after nerve injury

Stephens, K. E., Zhou, W., Ji, Z., Chen, Z., He, S., Ji, H., Guan, Y. & Taverna, S. D., Feb 19 2019, In : BMC genomics. 20, 1, 147.

Research output: Contribution to journalArticle

2018

Hydrazide Mimics for Protein Lysine Acylation to Assess Nucleosome Dynamics and Deubiquitinase Action

Bhat, S., Hwang, Y., Gibson, M. D., Morgan, M. T., Taverna, S. D., Zhao, Y., Wolberger, C., Poirier, M. G. & Cole, P. A., Aug 1 2018, In : Journal of the American Chemical Society. 140, 30, p. 9478-9485 8 p.

Research output: Contribution to journalArticle

RNA-seq of spinal cord from nerve-injured rats after spinal cord stimulation

Stephens, K. E., Chen, Z., Sivanesan, E., Raja, S. N., Linderoth, B., Taverna, S. D. & Guan, Y., Dec 1 2018, In : Molecular Pain. 14

Research output: Contribution to journalArticle

2016

Dissecting relative contributions of cis-and trans-determinants to nucleosome distribution by comparing Tetrahymena macronuclear and micronuclear chromatin

Xiong, J., Gao, S., Dui, W., Yang, W., Chen, X., Taverna, S. D., Pearlman, R. E., Ashlock, W., Miao, W. & Liu, Y., Dec 2016, In : Nucleic acids research. 44, 21, p. 10091-10105 15 p.

Research output: Contribution to journalArticle

Reader domain specificity and lysine demethylase-4 family function

Su, Z., Wang, F., Lee, J. H., Stephens, K. E., Papazyan, R., Voronina, E., Krautkramer, K. A., Raman, A., Thorpe, J. J., Boersma, M. D., Kuznetsov, V. I., Miller, M. D., Taverna, S. D., Phillips, G. N. & Denu, J. M., Nov 14 2016, In : Nature Communications. 7, 13387.

Research output: Contribution to journalArticle

Structure of the germline genome of Tetrahymena thermophila and relationship to the massively rearranged somatic genome

Hamilton, E. P., Kapusta, A., Huvos, P. E., Bidwell, S. L., Zafar, N., Tang, H., Hadjithomas, M., Krishnakumar, V., Badger, J. H., Caler, E. V., Russ, C., Zeng, Q., Fan, L., Levin, J. Z., Shea, T., Young, S. K., Hegarty, R., Daza, R., Gujja, S., Wortman, J. R. & 16 others, Birren, B. W., Nusbaum, C., Thomas, J., Carey, C. M., Pritham, E. J., Feschotte, C., Noto, T., Mochizuki, K., Papazyan, R., Taverna, S. D., Dear, P. H., Cassidy-Hanley, D. M., Xiong, J., Miao, W., Orias, E. & Coyne, R. S., Nov 28 2016, In : eLife. 5, NOVEMBER2016, e19090.

Research output: Contribution to journalArticle

2015

Nucleosome competition reveals processive acetylation by the SAGA HAT module

Ringel, A. E., Cieniewicz, A. M., Taverna, S. D. & Wolberger, C., Oct 6 2015, In : Proceedings of the National Academy of Sciences of the United States of America. 112, 40, p. E5461-E5470

Research output: Contribution to journalArticle

Purification of specific chromatin loci for proteomic analysis

Byrum, S. D., Taverna, S. D. & Tackett, A. J., Jan 1 2015, In : Methods in Molecular Biology. 1228, p. 83-92 10 p.

Research output: Contribution to journalArticle

2014

A CRISPR-based approach for proteomic analysis of a single genomic locus

Waldrip, Z. J., Byrum, S. D., Storey, A. J., Gao, J., Byrd, A. K., Mackintosh, S. G., Wahls, W. P., Taverna, S. D., Raney, K. D. & Tackett, A. J., Jan 1 2014, In : Epigenetics. 9, 9, p. 1207-1211 5 p.

Research output: Contribution to journalArticle

A PWWP domain-containing protein targets the NuA3 acetyltransferase complex via histone H3 lysine 36 trimethylation to coordinate transcriptional elongation at coding regions

Gilbert, T. M., McDaniel, S. L., Byrum, S. D., Cades, J. A., Dancy, B. C. R., Wade, H., Tackett, A. J., Strahl, B. D. & Taverna, S. D., Nov 1 2014, In : Molecular and Cellular Proteomics. 13, 11, p. 2883-2895 13 p.

Research output: Contribution to journalArticle

A selective phenelzine analogue inhibitor of histone demethylase LSD1

Prusevich, P., Kalin, J. H., Ming, S. A., Basso, M., Givens, J., Li, X., Hu, J., Taylor, M. S., Cieniewicz, A. M., Hsiao, P. Y., Huang, R., Roberson, H., Adejola, N., Avery, L. B., Casero, R. A., Taverna, S. D., Qian, J., Tackett, A. J., Ratan, R. R., McDonald, O. G. & 2 others, Feinberg, A. P. & Cole, P. A., Jun 20 2014, In : ACS chemical biology. 9, 6, p. 1284-1293 10 p.

Research output: Contribution to journalArticle

Methylation of histone H3K23 blocks DNA damage in pericentric heterochromatin during meiosis

Papazyan, R., Voronina, E., Chapman, J. R., Luperchio, T. R., Gilbert, T. M., Meier, E., Mackintosh, S. G., Shabanowitz, J., Tackett, A. J., Reddy, K. L., Coyne, R. S., Hunt, D. F., Liu, Y. & Taverna, S. D., Aug 26 2014, In : eLife. 2014, 3, e02996.

Research output: Contribution to journalArticle

The bromodomain of gcn5 regulates site specificity of lysine acetylation on histone H3

Cieniewicz, A. M., Moreland, L., Ringel, A. E., Mackintosh, S. G., Raman, A., Gilbert, T. M., Wolberger, C., Tackett, A. J. & Taverna, S. D., Nov 1 2014, In : Molecular and Cellular Proteomics. 13, 11, p. 2896-2910 15 p.

Research output: Contribution to journalArticle

Using S-adenosyl-L-homocysteine capture compounds to characterize S-adenosyl-L-methionine and S-adenosyl-L-homocysteine binding proteins

Brown, L. J., Baranowski, M., Wang, Y., Schrey, A. K., Lenz, T., Taverna, S. D., Cole, P. A. & Sefkow, M., Dec 15 2014, In : Analytical biochemistry. 467, p. 14-21 8 p.

Research output: Contribution to journalArticle

2013

Post-translational modifications

Byrum, S. D., Taverna, S. D. & Tackett, A. J., Jan 1 2013, Epigenetics, Environment, and Genes. Apple Academic Press, p. 193-203 11 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Purification of a specific native genomic locus for proteomic analysis

Byrum, S. D., Taverna, S. D. & Tackett, A. J., Nov 1 2013, In : Nucleic acids research. 41, 20, p. e195

Research output: Contribution to journalArticle

Selective inhibition of p300 HAT blocks cell cycle progression, induces cellular senescence, and inhibits the DNA damage response in melanoma cells

Yan, G., Eller, M. S., Elm, C., Larocca, C. A., Ryu, B., Panova, I. P., Dancy, B. M., Bowers, E. M., Meyers, D., Lareau, L., Cole, P. A., Taverna, S. D. & Alani, R. M., Oct 2013, In : Journal of Investigative Dermatology. 133, 10, p. 2444-2452 9 p.

Research output: Contribution to journalArticle

Separation and Purification of multiply acetylated proteins using cation-exchange chromatography

Papazyan, R. & Taverna, S. D., 2013, Protein Acetylation: Methods and Protocols. Humana Press Inc., p. 103-113 11 p. (Methods in Molecular Biology; vol. 981).

Research output: Chapter in Book/Report/Conference proceedingChapter

2012

Azalysine analogues as probes for protein lysine deacetylation and demethylation

Dancy, B. C. R., Ming, S. A., Papazyan, R., Jelinek, C. A., Majumdar, A., Sun, Y., Dancy, B. M., Drury, W. J., Cotter, R. J., Taverna, S. D. & Cole, P. A., Mar 21 2012, In : Journal of the American Chemical Society. 134, 11, p. 5138-5148 11 p.

Research output: Contribution to journalArticle

ChAP-MS: A method for identification of proteins and histone posttranslational modifications at a single genomic locus

Byrum, S. D., Raman, A., Taverna, S. D. & Tackett, A. J., Jul 26 2012, In : Cell Reports. 2, 1, p. 198-205 8 p.

Research output: Contribution to journalArticle

2011

Analysis of histone exchange during chromatin purification

Byrum, S., Mackintosh, S. G., Edmondson, R. D., Cheung, W. L., Taverna, S. D. & Tackett, A. J., Feb 2011, In : Journal of Integrated OMICS. 1, 1, p. 61-65 5 p.

Research output: Contribution to journalArticle

Conserved herpesvirus kinases target the DNA damage response pathway and TIP60 histone acetyltransferase to promote virus replication

Li, R., Zhu, J., Xie, Z., Liao, G., Liu, J., Chen, M. R., Hu, S., Woodard, C., Lin, J., Taverna, S. D., Desai, P., Ambinder, R. F., Hayward, G. S., Qian, J., Zhu, H. & Hayward, S. D., Oct 4 2011, In : Cell Host and Microbe. 10, 4, p. 390-400 11 p.

Research output: Contribution to journalArticle

MassSQUIRM: An assay for quantitative measurement of lysine demethylase activity

Blair, L. P., Avaritt, N. L., Huang, R., Cole, P. A., Taverna, S. D. & Tackett, A. J., Apr 2011, In : Epigenetics. 6, 4, p. 491-500 10 p.

Research output: Contribution to journalArticle

Quantitative analysis of histone exchange for transcriptionally active chromatin

Byrum, S. D., Taverna, S. D. & Tackett, A. J., Jul 7 2011, In : Journal of Clinical Bioinformatics. 1, 1, 17.

Research output: Contribution to journalArticle

2010

Reader's block

Taverna, S. D. & Cole, P. A., Dec 23 2010, In : Nature. 468, 7327, p. 1050-1051 2 p.

Research output: Contribution to journalShort survey

2009

A noncanonical bromodomain in the AAA ATPase protein Yta7 directs chromosomal positioning and barrier chromatin activity

Gradolatto, A., Smart, S. K., Byrum, S., Blair, L. P., Rogers, R. S., Kolar, E. A., Lavender, H., Larson, S. K., Aitchison, J. D., Taverna, S. D. & Tackett, A. J., Sep 1 2009, In : Molecular and cellular biology. 29, 17, p. 4604-4611 8 p.

Research output: Contribution to journalArticle

Mapping the local protein interactome of the NuA3 histone acetyltransferase

Smart, S. K., Mackintosh, S. G., Edmondson, R. D., Taverna, S. D. & Tackett, A. J., Sep 1 2009, In : Protein Science. 18, 9, p. 1987-1997 11 p.

Research output: Contribution to journalArticle

2008

Saccharomyces cerevisiae Yta7 regulates histone gene expression

Gradolatto, A., Rogers, R. S., Lavender, H., Taverna, S. D., Allis, C. D., Aitchison, J. D. & Tackett, A. J., May 1 2008, In : Genetics. 179, 1, p. 291-304 14 p.

Research output: Contribution to journalArticle

2007

How chromatin-binding modules interpret histone modifications: Lessons from professional pocket pickers

Taverna, S. D., Li, H., Ruthenburg, A. J., Allis, C. D. & Patel, D. J., Nov 1 2007, In : Nature Structural and Molecular Biology. 14, 11, p. 1025-1040 16 p.

Research output: Contribution to journalReview article

"Hunt"-ing for post-translational modifications that underlie the histone code

Taverna, S. D., David Allis, C. & Hake, S. B., Jan 1 2007, In : International Journal of Mass Spectrometry. 259, 1-3, p. 40-45 6 p.

Research output: Contribution to journalArticle

Long-distance combinatorial linkage between methylation and acetylation on histone H3 N termini

Taverna, S. D., Ueberheide, B. M., Liu, Y., Tackett, A. J., Dias, R. L., Shabanowitz, J., Chait, B. T., Hunt, D. F. & Allis, C. D., Feb 13 2007, In : Proceedings of the National Academy of Sciences of the United States of America. 104, 7, p. 2086-2091 6 p.

Research output: Contribution to journalArticle

Phosphorylation of the SQ H2A.X motif is required for proper meiosis and mitosis in Tetrahymena thermophila

Song, X., Gjoneska, E., Ren, Q., Taverna, S. D., Allis, C. D. & Gorovsky, M. A., Apr 1 2007, In : Molecular and cellular biology. 27, 7, p. 2648-2660 13 p.

Research output: Contribution to journalArticle

RNAi-dependent H3K27 methylation is required for heterochromatin formation and DNA elimination in Tetrahymena

Liu, Y., Taverna, S. D., Muratore, T. L., Shabanowitz, J., Hunt, D. F. & Allis, C. D., Jun 15 2007, In : Genes and Development. 21, 12, p. 1530-1545 16 p.

Research output: Contribution to journalArticle

2006

Yng1 PHD Finger Binding to H3 Trimethylated at K4 Promotes NuA3 HAT Activity at K14 of H3 and Transcription at a Subset of Targeted ORFs

Taverna, S. D., Ilin, S., Rogers, R. S., Tanny, J. C., Lavender, H., Li, H., Baker, L., Boyle, J., Blair, L. P., Chait, BT. T., Patel, D. J., Aitchison, J. D., Tackett, A. J. & Allis, C. D., Dec 8 2006, In : Molecular cell. 24, 5, p. 785-796 12 p.

Research output: Contribution to journalArticle

2004

The enhancement of histone H4 and H2A serine 1 phosphorylation during mitosis and S-phase is evolutionarily conserved

Barber, C. M., Turner, F. B., Wang, Y., Hagstrom, K., Taverna, S. D., Mollah, S., Ueberheide, B., Meyer, B. J., Hunt, D. F., Cheung, P. & Allis, C. D., May 1 2004, In : Chromosoma. 112, 7, p. 360-371 12 p.

Research output: Contribution to journalArticle

2003

Antigen receptor loci poised for V(D)J rearrangement are broadly associated with BRG1 and flanked by peaks of histone H3 dimethylated at lysine 4

Morshead, K. B., Ciccone, D. N., Taverna, S. D., Allis, C. D. & Oettinger, M. A., Sep 30 2003, In : Proceedings of the National Academy of Sciences of the United States of America. 100, 20, p. 11577-11582 6 p.

Research output: Contribution to journalArticle

2002

Methylation of histone H3 at lysine 9 targets programmed DNA elimination in Tetrahymena

Taverna, S. D., Coyne, R. S. & Allis, C. D., Sep 20 2002, In : Cell. 110, 6, p. 701-711 11 p.

Research output: Contribution to journalArticle

2001

Specificity of the HP1 chromo domain for the methylated N-terminus of histone H3

Jacobs, S. A., Taverna, S. D., Zhang, Y., Briggs, S. D., Li, J., Eissenberg, J. C., Allis, C. D. & Khorasanizadeh, S., Sep 17 2001, In : EMBO Journal. 20, 18, p. 5232-5241 10 p.

Research output: Contribution to journalArticle