19992020

Research output per year

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Research Output

2020

ICARE: An R package to build, validate and apply absolute risk models

Choudhury, P. P., Maas, P., Wilcox, A., Wheeler, W., Brook, M., Check, D., Garcia-Closas, M. & Chatterjee, N., Jan 1 2020, In : PloS one. 15, 2, e0228198.

Research output: Contribution to journalArticle

Open Access

Tuberculosis infection and lung adenocarcinoma: Mendelian randomization and pathway analysis of genome-wide association study data from never-smoking Asian women

Wong, J. Y. Y., Zhang, H., Hsiung, C. A., Shiraishi, K., Yu, K., Matsuo, K., Wong, M. P., Hong, Y. C., Wang, J., Seow, W. J., Wang, Z., Song, M., Kim, H. N., Chang, I. S., Chatterjee, N., Hu, W., Wu, C., Mitsudomi, T., Zheng, W., Kim, J. H. & 166 others, Seow, A., Caporaso, N. E., Shin, M. H., Chung, L. P., An, S. J., Wang, P., Yang, Y., Zheng, H., Yatabe, Y., Zhang, X. C., Kim, Y. T., Cai, Q., Yin, Z., Kim, Y. C., Bassig, B. A., Chang, J., Ho, J. C. M., Ji, B. T., Daigo, Y., Ito, H., Momozawa, Y., Ashikawa, K., Kamatani, Y., Honda, T., Hosgood, H. D., Sakamoto, H., Kunitoh, H., Tsuta, K., Watanabe, S. I., Kubo, M., Miyagi, Y., Nakayama, H., Matsumoto, S., Tsuboi, M., Goto, K., Shi, J., Song, L., Hua, X., Takahashi, A., Goto, A., Minamiya, Y., Shimizu, K., Tanaka, K., Wei, F., Matsuda, F., Su, J., Kim, Y. H., Oh, I. J., Song, F., Su, W. C., Chen, Y. M., Chang, G. C., Chen, K. Y., Huang, M. S., Chien, L. H., Xiang, Y. B., Park, J. Y., Kweon, S. S., Chen, C. J., Lee, K. M., Blechter, B., Li, H., Gao, Y. T., Qian, B., Lu, D., Liu, J., Jeon, H. S., Hsiao, C. F., Sung, J. S., Tsai, Y. H., Jung, Y. J., Guo, H., Hu, Z., Wang, W. C., Chung, C. C., Burdett, L., Yeager, M., Hutchinson, A., Berndt, S. I., Wu, W., Pang, H., Li, Y., Choi, J. E., Park, K. H., Sung, S. W., Liu, L., Kang, C. H., Zhu, M., Chen, C. H., Yang, T. Y., Xu, J., Guan, P., Tan, W., Wang, C. L., Hsin, M., Sit, K. Y., Ho, J., Chen, Y., Choi, Y. Y., Hung, J. Y., Kim, J. S., Yoon, H. I., Lin, C. C., Park, I. K., Xu, P., Wang, Y., He, Q., Perng, R. P., Chen, C. Y., Vermeulen, R., Wu, J., Lim, W. Y., Chen, K. C., Li, Y. J., Li, J., Chen, H., Yu, C. J., Jin, L., Chen, T. Y., Jiang, S. S., Liu, J., Yamaji, T., Hicks, B., Wyatt, K., Li, S. A., Dai, J., Ma, H., Jin, G., Song, B., Wang, Z., Cheng, S., Li, X., Ren, Y., Cui, P., Iwasaki, M., Shimazu, T., Tsugane, S., Zhu, J., Yang, K., Jiang, G., Fei, K., Wu, G., Lin, H. C., Chen, H. L., Fang, Y. H., Tsai, F. Y., Hsieh, W. S., Yu, J., Stevens, V. L., Laird-Offringa, I. A., Marconett, C. N., Rieswijk, L., Chao, A., Yang, P. C., Shu, X. O., Wu, T., Wu, Y. L., Lin, D., Chen, K., Zhou, B., Huang, Y. C., Kohno, T., Shen, H., Chanock, S. J., Rothman, N. & Lan, Q., Mar 2020, In : Genomics. 112, 2, p. 1223-1232 10 p.

Research output: Contribution to journalArticle

2019

Assessment of breast cancer risk: which tools to use?

Garcia-Closas, M. & Chatterjee, N., Apr 1 2019, In : The Lancet Oncology. 20, 4, p. 463-464 2 p.

Research output: Contribution to journalComment/debate

Author Correction: Retinal transcriptome and eQTL analyses identify genes associated with age-related macular degeneration (Nature Genetics, (2019), 51, 4, (606-610), 10.1038/s41588-019-0351-9)

Ratnapriya, R., Sosina, O. A., Starostik, M. R., Kwicklis, M., Kapphahn, R. J., Fritsche, L. G., Walton, A., Arvanitis, M., Gieser, L., Pietraszkiewicz, A., Montezuma, S. R., Chew, E. Y., Battle, A., Abecasis, G. R., Ferrington, D. A., Chatterjee, N. & Swaroop, A., Jun 1 2019, In : Nature genetics. 51, 6, 1 p.

Research output: Contribution to journalComment/debate

Open Access

BOADICEA: a comprehensive breast cancer risk prediction model incorporating genetic and nongenetic risk factors

Lee, A., Mavaddat, N., Wilcox, A. N., Cunningham, A. P., Carver, T., Hartley, S., Babb de Villiers, C., Izquierdo, A., Simard, J., Schmidt, M. K., Walter, F. M., Chatterjee, N., Garcia-Closas, M., Tischkowitz, M., Pharoah, P., Easton, D. F. & Antoniou, A. C., Jan 1 2019, (Accepted/In press) In : Genetics in Medicine.

Research output: Contribution to journalArticle

Correction: BOADICEA: a comprehensive breast cancer risk prediction model incorporating genetic and nongenetic risk factors (Genetics in Medicine, (2019), 10.1038/s41436-018-0406-9)

Lee, A., Mavaddat, N., Wilcox, A. N., Cunningham, A. P., Carver, T., Hartley, S., de Villiers, C. B., Izquierdo, A., Simard, J., Schmidt, M. K., Walter, F. M., Chatterjee, N., Garcia-Closas, M., Tischkowitz, M., Pharoah, P., Easton, D. F. & Antoniou, A. C., Jan 1 2019, In : Genetics in Medicine.

Research output: Contribution to journalComment/debate

Open Access

Generalized meta-analysis for multiple regression models across studies with disparate covariate information

Kundu, P., Tang, R. & Chatterjee, N., Sep 1 2019, In : Biometrika. 106, 3, p. 567-585 19 p.

Research output: Contribution to journalArticle

Joint association of mammographic density adjusted for age and body mass index and polygenic risk score with breast cancer risk

Vachon, C. M., Scott, C. G., Tamimi, R. M., Thompson, D. J., Fasching, P. A., Stone, J., Southey, M. C., Winham, S., Lindström, S., Lilyquist, J., Giles, G. G., Milne, R. L., MacInnis, R. J., Baglietto, L., Li, J., Czene, K., Bolla, M. K., Wang, Q., Dennis, J., Haeberle, L. & 16 others, Eriksson, M., Kraft, P., Luben, R., Wareham, N., Olson, J. E., Norman, A., Polley, E. C., Maskarinec, G., Le Marchand, L., Haiman, C. A., Hopper, J. L., Couch, F. J., Easton, D. F., Hall, P., Chatterjee, N. & Garcia-Closas, M., May 22 2019, In : Breast Cancer Research. 21, 1, 68.

Research output: Contribution to journalArticle

Open Access
Open Access

Polygenic Risk Scores for Prediction of Breast Cancer and Breast Cancer Subtypes

NBCS Collaborators, ABCTB Investigators & kConFab/AOCS Investigators, Jan 3 2019, In : American journal of human genetics. 104, 1, p. 21-34 14 p.

Research output: Contribution to journalArticle

Proceedings of the fourth international molecular pathological epidemiology (MPE) meeting

Campbell, P. T., Ambrosone, C. B., Nishihara, R., Aerts, H. J. W. L., Bondy, M., Chatterjee, N., Garcia-Closas, M., Giannakis, M., Golden, J. A., Heng, Y. J., Kip, N. S., Koshiol, J., Liu, X. S., Lopes-Ramos, C. M., Mucci, L. A., Nowak, J. A., Phipps, A. I., Quackenbush, J., Schoen, R. E., Sholl, L. M. & 10 others, Tamimi, R. M., Wang, M., Weijenberg, M. P., Wu, C. J., Wu, K., Yao, S., Yu, K. H., Zhang, X., Rebbeck, T. R. & Ogino, S., Aug 1 2019, In : Cancer Causes and Control. 30, 8, p. 799-811 13 p.

Research output: Contribution to journalReview article

Retinal transcriptome and eQTL analyses identify genes associated with age-related macular degeneration

Ratnapriya, R., Sosina, O. A., Starostik, M. R., Kwicklis, M., Kapphahn, R. J., Fritsche, L. G., Walton, A., Arvanitis, M., Gieser, L., Pietraszkiewicz, A., Montezuma, S. R., Chew, E. Y., Battle, A., Abecasis, G. R., Ferrington, D. A., Chatterjee, N. & Swaroop, A., Apr 1 2019, In : Nature genetics. 51, 4, p. 606-610 5 p.

Research output: Contribution to journalLetter

2018

Adjustment of nonconfounding covariates in case-control genetic association studies

Zhang, H., Chatterjee, N., Rader, D. & Chen, J., Mar 1 2018, In : Annals of Applied Statistics. 12, 1, p. 200-221 22 p.

Research output: Contribution to journalArticle

A subregion-based burden test for simultaneous identification of susceptibility loci and subregions within

Zhu, B., Mirabello, L. & Chatterjee, N., Oct 1 2018, In : Genetic Epidemiology. 42, 7, p. 673-683 11 p.

Research output: Contribution to journalArticle

Characterising cis-regulatory variation in the transcriptome of histologically normal and tumour-derived pancreatic tissues

Zhang, M., Lykke-Andersen, S., Zhu, B., Xiao, W., Hoskins, J. W., Zhang, X., Rost, L. M., Collins, I., Bunt, M. V. D., Jia, J., Parikh, H., Zhang, T., Song, L., Jermusyk, A., Chung, C. C., Zhou, W., Matters, G. L., Kurtz, R. C., Yeager, M., Jensen, T. H. & 13 others, Brown, K. M., Ongen, H., Bamlet, W. R., Murray, B. A., McCarthy, M. I., Chanock, S. J., Chatterjee, N., Wolpin, B. M., Smith, J. P., Olson, S. H., Petersen, G. M., Shi, J. & Amundadottir, L., Mar 2018, In : Gut. 67, 3, p. 521-533 13 p.

Research output: Contribution to journalArticle

Erratum: Publisher correction: Functional characterization of a multi-cancer risk locus on chr5p15.33 reveals regulation of TERT by ZNF148 (Nature communications (2017) 8 (15034))

Fang, J., Jia, J., Makowski, M., Xu, M., Wang, Z., Zhang, T., Hoskins, J. W., Choi, J., Han, Y., Zhang, M., Thomas, J., Kovacs, M., Collins, I., Dzyadyk, M., Thompson, A., O'Neill, M., Das, S., Lan, Q., Koster, R., Stolzenberg-Solomon, R. S. & 21 others, Kraft, P., Wolpin, B. M., Jansen, P. W. T. C., Olson, S., McGlynn, K. A., Kanetsky, P. A., Chatterjee, N., Barrett, J. H., Dunning, A. M., Taylor, J. C., Newton-Bishop, J. A., Timothy Bishop, D., Andresson, T., Petersen, G. M., Amos, C. I., Iles, M. M., Nathanson, K. L., Teresa Landi, M., Vermeulen, M., Brown, K. M. & Amundadottir, L. T., Mar 5 2018, In : Nature communications. 9, 1 p.

Research output: Contribution to journalComment/debate

Estimation of complex effect-size distributions using summary-level statistics from genome-wide association studies across 32 complex traits

Zhang, Y., Qi, G., Park, J. H. & Chatterjee, N., Sep 1 2018, In : Nature Genetics. 50, 9, p. 1318-1326 9 p.

Research output: Contribution to journalArticle

Etiology of hormone receptor positive breast cancer differs by levels of histologic grade and proliferation

kConFab Investigators, Aug 15 2018, In : International Journal of Cancer. 143, 4, p. 746-757 12 p.

Research output: Contribution to journalArticle

Heritability informed power optimization (HIPO) leads to enhanced detection of genetic associations across multiple traits

Qi, G. & Chatterjee, N., Oct 1 2018, In : PLoS Genetics. 14, 10, p. e1007549

Research output: Contribution to journalArticle

Joint associations of a polygenic risk score and environmental risk factors for breast cancer in the Breast Cancer Association Consortium

Rudolph, A., Song, M., Brook, M. N., Milne, R. L., Mavaddat, N., Michailidou, K., Bolla, M. K., Wang, Q., Dennis, J., Wilcox, A. N., Hopper, J. L., Southey, M. C., Keeman, R., Fasching, P. A., Beckmann, M. W., Gago-Dominguez, M., Castelao, J. E., Guénel, P., Truong, T., Bojesen, S. E. & 31 others, Flyger, H., Brenner, H., Arndt, V., Brauch, H., Brüning, T., Mannermaa, A., Kosma, V. M., Lambrechts, D., Keupers, M., Couch, F. J., Vachon, C., Giles, G. G., MacInnis, R. J., Figueroa, J., Brinton, L., Czene, K., Brand, J. S., Gabrielson, M., Humphreys, K., Cox, A., Cross, S. S., Dunning, A. M., Orr, N., Swerdlow, A., Hall, P., Pharoah, P. D. P., Schmidt, M. K., Easton, D. F., Chatterjee, N., Chang-Claude, J. & García-Closas, M., Apr 2018, In : International journal of epidemiology. 47, 2, p. 526-536 11 p.

Research output: Contribution to journalArticle

Post-Selection Inference Following Aggregate Level Hypothesis Testing in Large-Scale Genomic Data

Heller, R., Chatterjee, N., Krieger, A. & Shi, J., Jun 25 2018, (Accepted/In press) In : Journal of the American Statistical Association. p. 1-14 14 p.

Research output: Contribution to journalArticle

Power Analysis for Genetic Association Test (PAGEANT) provides insights to challenges for rare variant association studies

Derkach, A., Zhang, H. & Chatterjee, N., May 1 2018, In : Bioinformatics. 34, 9, p. 1506-1513 8 p.

Research output: Contribution to journalArticle

Two high-risk susceptibility loci at 6p25.3 and 14q32.13 for Waldenström macroglobulinemia

McMaster, M. L., Berndt, S. I., Zhang, J., Slager, S. L., Li, S. A., Vajdic, C. M., Smedby, K. E., Yan, H., Birmann, B. M., Brown, E. E., Smith, A., Kleinstern, G., Fansler, M. M., Mayr, C., Zhu, B., Chung, C. C., Park, J. H., Burdette, L., Hicks, B. D., Hutchinson, A. & 61 others, Teras, L. R., Adami, H. O., Bracci, P. M., McKay, J., Monnereau, A., Link, B. K., Vermeulen, R. C. H., Ansell, S. M., Maria, A., Diver, W. R., Melbye, M., Ojesina, A. I., Kraft, P., Boffetta, P., Clavel, J., Giovannucci, E., Besson, C. M., Canzian, F., Travis, R. C., Vineis, P., Weiderpass, E., Montalvan, R., Wang, Z., Yeager, M., Becker, N., Benavente, Y., Brennan, P., Foretova, L., Maynadie, M., Nieters, A., de Sanjose, S., Staines, A., Conde, L., Riby, J., Glimelius, B., Hjalgrim, H., Pradhan, N., Feldman, A. L., Novak, A. J., Lawrence, C., Bassig, B. A., Lan, Q., Zheng, T., North, K. E., Tinker, L. F., Cozen, W., Severson, R. K., Hofmann, J. N., Zhang, Y., Jackson, R. D., Morton, L. M., Purdue, M. P., Chatterjee, N., Offit, K., Cerhan, J. R., Chanock, S. J., Rothman, N., Vijai, J., Goldin, L. R., Skibola, C. F. & Caporaso, N. E., Dec 1 2018, In : Nature communications. 9, 1, 4182.

Research output: Contribution to journalArticle

Using imputed genotype data in the joint score tests for genetic association and gene–environment interactions in case-control studies

Song, M., Wheeler, W., Caporaso, N. E., Landi, M. T. & Chatterjee, N., Mar 1 2018, In : Genetic Epidemiology. 42, 2, p. 146-155 10 p.

Research output: Contribution to journalArticle

2017

Association between breast cancer genetic susceptibility variants and terminal duct lobular unit involution of the breast

Bodelon, C., Oh, H., Chatterjee, N., Garcia-Closas, M., Palakal, M., Sherman, M. E., Pfeiffer, R. M., Geller, B. M., Vacek, P. M., Weaver, D. L., Chicoine, R. E., Papathomas, D., Xiang, J., Patel, D. A., Khodr, Z. G., Linville, L., Clare, S. E., Visscher, D. W., Mies, C., Hewitt, S. M. & 6 others, Brinton, L. A., Storniolo, A. M., He, C., Chanock, S. J., Gierach, G. L. & Figueroa, J. D., Feb 15 2017, In : International Journal of Cancer. 140, 4, p. 825-832 8 p.

Research output: Contribution to journalArticle

Association between GWAS-identified lung adenocarcinoma susceptibility loci and EGFR mutations in never-smoking Asian women, and comparison with findings from Western populations

Seow, W. J., Matsuo, K., Hsiung, C. A., Shiraishi, K., Song, M., NamKim, H., Wong, M. P., Hong, Y. C., Dean Hosgood, H., Wang, Z., Chang, I. S., Wang, J. C., Chatterjee, N., Tucker, M., Wei, H., Mitsudomi, T., Zheng, W., Kim, J. H., Zhou, B., Caporaso, N. E. & 166 others, Albanes, D., Shin, M. H., Chung, L. P., An, S. J., Wang, P., Zheng, H., Yatabe, Y., Zhang, X. C., Kim, Y. T., Shu, X. O., Kim, Y. C., Bassig, B. A., Chang, J., Man Ho, J. C., Ji, B. T., Kubo, M., Daigo, Y., Ito, H., Momozawa, Y., Ashikawa, K., Kamatani, Y., Honda, T., Sakamoto, H., Kunitoh, H., Tsuta, K., Watanabe, S. I., Nokihara, H., Miyagi, Y., Nakayama, H., Matsumoto, S., Tsuboi, M., Goto, K., Yin, Z., Shi, J., Takahashi, A., Goto, A., Minamiya, Y., Shimizu, K., Tanaka, K., Wu, T., Wei, F., Wong, J. Y. Y., Matsuda, F., Su, J., Kim, Y. H., Oh, I. J., Song, F., Lee, V. H. F., Su, W. C., Chen, Y. M., Chang, G. C., Chen, K. Y., Huang, M. S., Yang, P. C., Lin, H. C., Xiang, Y. B., Seow, A., Park, J. Y., Kweon, S. S., Chen, C. J., Li, H., Gao, Y. T., Wu, C., Qian, B., Lu, D., Liu, J., Jeon, H. S., Hsiao, C. F., Sung, J. S., Tsai, Y. H., Jung, Y. J., Guo, H., Hu, Z., Wang, W. C., Chung, C. C., Lawrence, C., Burdett, L., Yeager, M., Jacobs, K. B., Hutchinson, A., Berndt, S. I., He, X., Wu, W., Wang, J., Li, Y., Choi, J. E., Park, K. H., Sung, S. W., Liu, L., Kang, C. H., Hu, L., Chen, C. H., Yang, T. Y., Xu, J., Guan, P., Tan, W., Wang, C. L., Loon Sihoe, A. D., Chen, Y., Choi, Y. Y., Hung, J. Y., Kim, J. S., Yoon, H. I., Cai, Q., Lin, C. C., Park, I. K., Xu, P., Dong, J., Kim, C., He, Q., Perng, R. P., Chen, C. Y., Vermeulen, R., Wu, J., Lim, W. Y., Chen, K. C., Chan, J. K. C., Chu, M., Li, Y. J., Li, J., Chen, H., Yu, C. J., Jin, L., Lo, Y. L., Chen, Y. H., Fraumeni, J. F., Liu, J., Yamaji, T., Yang, Y., Hicks, B., Wyatt, K., Li, S. A., Dai, J., Ma, H., Jin, G., Song, B., Wang, Z., Cheng, S., Li, X., Ren, Y., Cui, P., Iwasaki, M., Shimazu, T., Tsugane, S., Zhu, J., Jiang, G., Fei, K., Wu, G., Chien, L. H., Chen, H. L., Su, Y. C., Tsai, F. Y., Chen, Y. S., Yu, J., Stevens, V. L., Laird-Offringa, I. A., Marconett, C. N., Lin, D., Chen, K., Wu, Y. L., Landi, M. T., Shen, H., Rothman, N., Kohno, T., Chanock, S. J. & Lan, Q., Jan 1 2017, In : Human molecular genetics. 26, 2, p. 454-465 12 p.

Research output: Contribution to journalArticle

Association of Genome-Wide Association Study (GWAS) identified SNPs and risk of breast cancer in an Indian population

Nagrani, R., Mhatre, S., Rajaraman, P., Chatterjee, N., Akbari, M. R., Boffetta, P., Brennan, P., Badwe, R., Gupta, S. & Dikshit, R., Jan 18 2017, In : Scientific Reports. 7, 40963.

Research output: Contribution to journalArticle

Common genetic variation and risk of gallbladder cancer in India: a case-control genome-wide association study

Mhatre, S., Wang, Z., Nagrani, R., Badwe, R., Chiplunkar, S., Mittal, B., Yadav, S., Zhang, H., Chung, C. C., Patil, P., Chanock, S., Dikshit, R., Chatterjee, N. & Rajaraman, P., Apr 1 2017, In : The Lancet Oncology. 18, 4, p. 535-544 10 p.

Research output: Contribution to journalArticle

Corrigendum: Rare variants of large effect in BRCA2 and CHEK2 affect risk of lung cancer (Nature Genetics (2014) 46 (736-741))

Wang, Y., McKay, J. D., Rafnar, T., Wang, Z., Timofeeva, M. N., Broderick, P., Zong, X., Laplana, M., Wei, Y., Han, Y., Lloyd, A., Delahaye-Sourdeix, M., Chubb, D., Gaborieau, V., Wheeler, W., Chatterjee, N., Thorleifsson, G., Sulem, P., Liu, G., Kaaks, R. & 63 others, Henrion, M., Kinnersley, B., Vallée, M., Le Calvez-Kelm, F., Stevens, V. L., Gapstur, S. M., Chen, W. V., Zaridze, D., Szeszenia-Dabrowska, N., Lissowska, J., Rudnai, P., Fabianova, E., Mates, D., Bencko, V., Foretova, L., Janout, V., Krokan, H. E., Gabrielsen, M. E., Skorpen, F., Vatten, L., Njølstad, I., Chen, C., Goodman, G., Benhamou, S., Vooder, T., Välk, K., Nelis, M., Metspalu, A., Lener, M., Lubiński, J., Johansson, M., Vineis, P., Agudo, A., Clavel-Chapelon, F., Bueno-De-Mesquita, H. B., Trichopoulos, D., Khaw, K. T., Johansson, M., Weiderpass, E., Tjønneland, A., Riboli, E., Lathrop, M., Scelo, G., Albanes, D., Caporaso, N. E., Ye, Y., Gu, J., Wu, X., Spitz, M. R., Dienemann, H., Rosenberger, A., Su, L., Matakidou, A., Eisen, T., Stefansson, K., Risch, A., Chanock, S. J., Christiani, D. C., Hung, R. J., Brennan, P., Landi, M. T., Houlston, R. S. & Amos, C. I., Mar 30 2017, In : Nature genetics. 49, 4, 1 p.

Research output: Contribution to journalComment/debate

Current Challenges and New Opportunities for Gene-Environment Interaction Studies of Complex Diseases

McAllister, K., Mechanic, L. E., Amos, C., Aschard, H., Blair, I. A., Chatterjee, N., Conti, D., Gauderman, W. J., Hsu, L., Hutter, C. M., Jankowska, M. M., Kerr, J., Kraft, P., Montgomery, S. B., Mukherjee, B., Papanicolaou, G. J., Patel, C. J., Ritchie, M. D., Ritz, B. R., Thomas, D. C. & 2 others, Wei, P. & Witte, J. S., Jan 1 2017, In : American journal of epidemiology. 186, 7, p. 753-761 9 p.

Research output: Contribution to journalArticle

Functional characterization of a multi-cancer risk locus on chr5p15.33 reveals regulation of TERT by ZNF148

Fang, J., Jia, J., Makowski, M., Xu, M., Wang, Z., Zhang, T., Hoskins, J. W., Choi, J., Han, Y., Zhang, M., Thomas, J., Kovacs, M., Collins, I., Dzyadyk, M., Thompson, A., O'Neill, M., Das, S., Lan, Q., Koster, R., Stolzenberg-Solomon, R. S. & 215 others, Kraft, P., Wolpin, B. M., Jansen, P. W. T. C., Olson, S., McGlynn, K. A., Kanetsky, P. A., Chatterjee, N., Barrett, J. H., Dunning, A. M., Taylor, J. C., Newton-Bishop, J. A., Timothy Bishop, D., Andresson, T., Petersen, G. M., Amos, C. I., Iles, M. M., Nathanson, K. L., Landi, M. T., Vermeulen, M., Brown, K. M., Amundadottir, L. T., Canzian, F., Kooperberg, C., Arslan, A. A., Bracci, P. M., Buring, J., Duell, E. J., Gallinger, S., Jacobs, E. J., Kamineni, A., Van Den Eeden, S., Klein, A. P., Kolonel, L. N., Li, D., Olson, S. H., Risch, H. A., Sesso, H. D., Visvanathan, K., Zheng, W., Albanes, D., Austin, M. A., Boutron-Ruault, M. C., Bueno-De-Mesquita, H. B., Cotterchio, M., Gaziano, J. M., Giovannucci, E. L., Goggins, M., Gross, M., Hassan, M., Helzlsouer, K. J., Holly, E. A., Hunter, D. J., Jenab, M., Kaaks, R., Key, T. J., Khaw, K. T., Krogh, V., Kurtz, R. C., LaCroix, A., Le Marchand, L., Mannisto, S., Patel, A. V., Peeters, P. H. M., Riboli, E., Shu, X. O., Sund, M., Thornquist, M., Tjønneland, A., Tobias, G. S., Trichopoulos, D., Wactawski-Wende, J., Yu, H., Yu, K., Zeleniuch-Jacquotte, A., Hoover, R., Hartge, P., Fuchs, C., Chanock, S. J., Stevens, V., Albanes, D., Caporaso, N. E., Brennan, P., McKay, J., Wu, X., Hung, R. J., McLaughlin, J. R., Bickeboller, H., Risch, A., Wichmann, E., Houlston, R. S., Mann, G., Hopper, J., Aitken, J., Armstrong, B., Giles, G., Holland, E., Kefford, R., Cust, A., Jenkins, M., Schmid, H., Puig, S., Aguilera, P., Badenas, C., Barreiro, A., Carrera, C., Gabriel, D., Xavier, P. G., Iglesias-Garcia, P., Malvehy, J., Mila, M., Pigem, R., Potrony, M., Puig Butille, J. A., Tell-Marti, G., Hayward, N. K., Martin, N. G., Montgomery, G., Duffy, D. L., Whiteman, D. C., MacGregor, S., Calista, D., Landi, G., Minghetti, P., Arcangeli, F., Bertazzi, P. A., Ghiorzo, P., Bianchi-Scarra, G., Pastorino, L., Bruno, W., Andreotti, V., Queirolo, P., Spagnolo, F., MacKie, R., Lang, J., Gruis, N., Van Nieuwpoort, F. A., Out, C., Bergman, W., Kukutsch, N., Bavinck, J. N. B., Bakker, B., Van Der Stoep, N., Ter Huurne, J., Van Der Rhee, H., Bekkenk, M., Snels, D., Van Praag, M., Brochez, L., Gerritsen, R., Crijns, M., Vasen, H., Janssen, B., Ingvar, C., Olsson, H., Jönsson, G., Borg, Å., Harbst, K., Nielsen, K., Zander, A. S., Molven, A., Helsing, P., Andresen, P. A., Rootwelt, H., Akslen, L. A., Paillerets, B. B. D., Demenais, F., Avril, M. F., Chaudru, V., Jeannin, P., Lesueur, F., Maubec, E., Mohamdi, H., Bossard, M., Vaysse, A., Boitier, F., Caron, O., Caux, F., Dalle, S., Dereure, O., Leroux, D., Martin, L., Mateus, C., Robert, C., Stoppa-Lyonnet, D., Thomas, L., Wierzbicka, E., Elder, D. E., Ming, M., Mitra, N., Debniak, T., Lubinski, J., Hocevar, M., Novakovic, S., Peric, B., Skerl, P., Hansson, J., Höiom, V., Friedman, E., Azizi, E., Baron-Epel, O., Scope, A., Pavlotsky, F., Cohen-Manheim, I., Laitman, Y., Harland, M., Randerson-Moor, J., Laye, J., Davies, J., Nsengimana, J., O'Shea, S., Chan, M., Gascoyne, J., Tucker, M. A., Goldstein, A. M. & Yang, X. R., Jan 1 2017, In : Nature communications. 8, 15034.

Research output: Contribution to journalArticle

Genetics of gallbladder cancer – Authors' reply

Mhatre, S., Chatterjee, N., Dikshit, R. & Rajaraman†, P., Jun 1 2017, In : The Lancet Oncology. 18, 6, p. e297

Research output: Contribution to journalLetter

Increasing mapping precision of genomewide association studies: To genotype and impute, sequence, or both?

Wang, Z. & Chatterjee, N., Jan 1 2017, In : Genome Biology. 18, 1, 118.

Research output: Contribution to journalArticle

Integrating Clinical and Multiple Omics Data for Prognostic Assessment across Human Cancers

Zhu, B., Song, N., Shen, R., Arora, A., Machiela, M. J., Song, L., Landi, M. T., Ghosh, D., Chatterjee, N., Baladandayuthapani, V. & Zhao, H., Dec 1 2017, In : Scientific Reports. 7, 1, 16954.

Research output: Contribution to journalArticle

Lessons Learned from Past Gene-Environment Interaction Successes

Ritz, B. R., Chatterjee, N., Garcia-Closas, M., Gauderman, W. J., Pierce, B. L., Kraft, P., Tanner, C. M., Mechanic, L. E. & McAllister, K., Jan 1 2017, In : American journal of epidemiology. 186, 7, p. 778-786 9 p.

Research output: Contribution to journalArticle

Opportunities and challenges for environmental exposure assessment in population-based studies

Patel, C. J., Kerr, J., Thomas, D. C., Mukherjee, B., Ritz, B., Chatterjee, N., Jankowska, M., Madan, J., Karagas, M. R., Mcallister, K. A., Mechanic, L. E., Fallin, M. D., Ladd-Acosta, C., Blair, I. A., Teitelbaum, S. L. & Amos, C. I., Sep 1 2017, In : Cancer Epidemiology Biomarkers and Prevention. 26, 9, p. 1370-1380 11 p.

Research output: Contribution to journalReview article

Semiparametric analysis of complex polygenic gene-environment interactions in case-control studies

Stalder, O., Asher, A., Liang, L., Carroll, R. J., Ma, Y. & Chatterjee, N., Dec 1 2017, In : Biometrika. 104, 4, p. 801-812 12 p.

Research output: Contribution to journalArticle

Update on the State of the Science for Analytical Methods for Gene-Environment Interactions

Gauderman, W. J., Mukherjee, B., Aschard, H., Hsu, L., Lewinger, J. P., Patel, C. J., Witte, J. S., Amos, C., Tai, C. G., Conti, D., Torgerson, D. G., Lee, S. & Chatterjee, N., 2017, In : American Journal of Epidemiology. 186, 7, p. 762-770 9 p.

Research output: Contribution to journalArticle

2016

Ages at menarche- and menopause-related genetic variants in relation to terminal duct lobular unit involution in normal breast tissue

Oh, H., Bodelon, C., Palakal, M., Chatterjee, N., Sherman, M. E., Linville, L., Geller, B. M., Vacek, P. M., Weaver, D. L., Chicoine, R. E., Papathomas, D., Patel, D. A., Xiang, J., Clare, S. E., Visscher, D. W., Mies, C., Hewitt, S. M., Brinton, L. A., Storniolo, A. M. V., He, C. & 4 others, Garcia-Closas, M., Chanock, S. J., Gierach, G. L. & Figueroa, J. D., Jun 24 2016, (Accepted/In press) In : Breast Cancer Research and Treatment. p. 1-10 10 p.

Research output: Contribution to journalArticle

An investigation of the association of genetic susceptibility risk with somatic mutation burden in breast cancer

Zhu, B., Mukherjee, A., Machiela, M. J., Song, L., Hua, X., Shi, J., Garcia-Closas, M., Chanock, S. J. & Chatterjee, N., Jul 28 2016, (Accepted/In press) In : British Journal of Cancer.

Research output: Contribution to journalArticle

A Powerful Procedure for Pathway-Based Meta-analysis Using Summary Statistics Identifies 43 Pathways Associated with Type II Diabetes in European Populations

Zhang, H., Wheeler, W., Hyland, P. L., Yang, Y., Shi, J., Chatterjee, N. & Yu, K., Jun 1 2016, In : PLoS Genetics. 12, 6, e1006122.

Research output: Contribution to journalArticle

Breast Cancer Risk From Modifiable and Nonmodifiable Risk Factors Among White Women in the United States

Maas, P., Barrdahl, M., Joshi, A. D., Auer, P. L., Gaudet, M. M., Milne, R. L., Schumacher, F. R., Anderson, W. F., Check, D., Chattopadhyay, S., Baglietto, L., Berg, C. D., Chanock, S. J., Cox, D. G., Figueroa, J. D., Gail, M. H., Graubard, B. I., Haiman, C. A., Hankinson, S. E., Hoover, R. N. & 25 others, Isaacs, C., Kolonel, L. N., Le Marchand, L., Lee, I. M., Lindström, S., Overvad, K., Romieu, I., Sanchez, M. J., Southey, M. C., Stram, D. O., Tumino, R., VanderWeele, T. J., Willett, W. C., Zhang, S., Buring, J. E., Canzian, F., Gapstur, S. M., Henderson, B. E., Hunter, D. J., Giles, G. G., Prentice, R. L., Ziegler, R. G., Kraft, P., Garcia-Closas, M. & Chatterjee, N., Oct 1 2016, In : JAMA Oncology. 2, 10, p. 1295-1302 8 p.

Research output: Contribution to journalArticle

Comparison of approaches for incorporating new information into existing risk prediction models

Grill, S., Ankerst, D. P., Gail, M. H., Chatterjee, N. & Pfeiffer, R. M., 2016, (Accepted/In press) In : Statistics in Medicine.

Research output: Contribution to journalArticle

Constrained Maximum Likelihood Estimation for Model Calibration Using Summary-Level Information From External Big Data Sources

Chatterjee, N., Chen, Y. H., Maas, P. & Carroll, R. J., Jan 2 2016, In : Journal of the American Statistical Association. 111, 513, p. 107-117 11 p.

Research output: Contribution to journalArticle

Cross-cancer genome-wide analysis of lung, ovary, breast, prostate, and colorectal cancer reveals novel pleiotropic associations

Colorectal Transdisciplinary (CORECT) Study, Ovarian Cancer Association Consortium (OCAC), The PRACTICAL Consortium, Hereditary Breast and Ovarian Cancer Research Group Netherlands (HEBON), African American Breast Cancer Consortium (AABC) & African Ancestry Prostate Cancer Consortium (AAPC), Sep 1 2016, In : Cancer Research. 76, 17, p. 5103-5114 12 p.

Research output: Contribution to journalArticle

Developing and evaluating polygenic risk prediction models for stratified disease prevention

Chatterjee, N., Shi, J. & García-Closas, M., Jul 1 2016, In : Nature Reviews Genetics. 17, 7, p. 392-406 15 p.

Research output: Contribution to journalReview article

Female chromosome X mosaicism is age-related and preferentially affects the inactivated X chromosome

MacHiela, M. J., Zhou, W., Karlins, E., Sampson, J. N., Freedman, N. D., Yang, Q., Hicks, B., Dagnall, C., Hautman, C., Jacobs, K. B., Abnet, C. C., Aldrich, M. C., Amos, C., Amundadottir, L. T., Arslan, A. A., Beane-Freeman, L. E., Berndt, S. I., Black, A., Blot, W. J., Bock, C. H. & 156 others, Bracci, P. M., Brinton, L. A., Bueno-De-Mesquita, H. B., Burdett, L., Buring, J. E., Butler, M. A., Canzian, F., Carreón, T., Chaffee, K. G., Chang, I. S., Chatterjee, N., Chen, C., Chen, C., Chen, K., Chung, C. C., Cook, L. S., Crous Bou, M., Cullen, M., Davis, F. G., De Vivo, I., Ding, T., Doherty, J., Duell, E. J., Epstein, C. G., Fan, J. H., Figueroa, J. D., Fraumeni, J. F., Friedenreich, C. M., Fuchs, C. S., Gallinger, S., Gao, Y. T., Gapstur, S. M., Garcia-Closas, M., Gaudet, M. M., Gaziano, J. M., Giles, G. G., Gillanders, E. M., Giovannucci, E. L., Goldin, L., Goldstein, A. M., Haiman, C. A., Hallmans, G., Hankinson, S. E., Harris, C. C., Henriksson, R., Holly, E. A., Hong, Y. C., Hoover, R. N., Hsiung, C. A., Hu, N., Hu, W., Hunter, D. J., Hutchinson, A., Jenab, M., Johansen, C., Khaw, K. T., Kim, H. N., Kim, Y. H., Kim, Y. T., Klein, A. P., Klein, R., Koh, W. P., Kolonel, L. N., Kooperberg, C., Kraft, P., Krogh, V., Kurtz, R. C., Lacroix, A., Lan, Q., Landi, M. T., Marchand, L. L., Li, D., Liang, X., Liao, L. M., Lin, D., Liu, J., Lissowska, J., Lu, L., Magliocco, A. M., Malats, N., Matsuo, K., McNeill, L. H., McWilliams, R. R., Melin, B. S., Mirabello, L., Moore, L., Olson, S. H., Orlow, I., Park, J. Y., Patinõ-Garcia, A., Peplonska, B., Peters, U., Petersen, G. M., Pooler, L., Prescott, J., Prokunina-Olsson, L., Purdue, M. P., Qiao, Y. L., Rajaraman, P., Real, F. X., Riboli, E., Risch, H. A., Rodriguez-Santiago, B., Ruder, A. M., Savage, S. A., Schumacher, F., Schwartz, A. G., Schwartz, K. L., Seow, A., Wendy Setiawan, V., Severi, G., Shen, H., Sheng, X., Shin, M. H., Shu, X. O., Silverman, D. T., Spitz, M. R., Stevens, V. L., Stolzenberg-Solomon, R., Stram, D., Tang, Z. Z., Taylor, P. R., Teras, L. R., Tobias, G. S., Van Den Berg, D., Visvanathan, K., Wacholder, S., Wang, J. C., Wang, Z., Wentzensen, N., Wheeler, W., White, E., Wiencke, J. K., Wolpin, B. M., Wong, M. P., Wu, C., Wu, T., Wu, X., Wu, Y. L., Wunder, J. S., Xia, L., Yang, H. P., Yang, P. C., Yu, K., Zanetti, K. A., Zeleniuch-Jacquotte, A., Zheng, W., Zhou, B., Ziegler, R. G., Perez-Jurado, L. A., Caporaso, N. E., Rothman, N., Tucker, M., Dean, M. C., Yeager, M. & Chanock, S. J., Jun 13 2016, In : Nature communications. 7, 11843.

Research output: Contribution to journalArticle

MEGSA: A Powerful and Flexible Framework for Analyzing Mutual Exclusivity of Tumor Mutations

Hua, X., Hyland, P. L., Huang, J., Song, L., Zhu, B., Caporaso, N. E., Landi, M. T., Chatterjee, N. & Shi, J., Mar 3 2016, In : American journal of human genetics. 98, 3, p. 442-455 14 p.

Research output: Contribution to journalArticle