Research Output 2009 2017

2017

Diffusion tensor imaging measures of white matter compared to myelin basic protein immunofluorescence in tissue cleared intact brains

Chang, E. H., Argyelan, M., Aggarwal, M., Chandon, T. S. S., Karlsgodt, K. H., Mori, S. & Malhotra, A. K. Feb 1 2017 In : Data in Brief. 10, p. 438-443 6 p.

Research output: Research - peer-reviewArticle

brain
integrity
Amygdala
Histology
Magnetic Resonance Imaging
White Matter
Anatomy
Status Epilepticus
Thalamus
Iron
Calcium
Pilocarpine

The role of myelination in measures of white matter integrity: Combination of diffusion tensor imaging and two-photon microscopy of CLARITY intact brains

Chang, E. H., Argyelan, M., Aggarwal, M., Chandon, T. S. S., Karlsgodt, K. H., Mori, S. & Malhotra, A. K. Feb 15 2017 In : NeuroImage. 147, p. 119-124 6 p.

Research output: Research - peer-reviewArticle

Diffusion Tensor Imaging
Hydrogel
Photons
Microscopy
Lipids
2016
Pyramidal Tracts
Brain Stem
White Matter
Diffusion Magnetic Resonance Imaging
Anisotropy
2015

Diffusion MR Microscopy of Cortical Development in the Mouse Embryo

Aggarwal, M., Gobius, I., Richards, L. J. & Mori, S. Jul 1 2015 In : Cerebral Cortex. 25, 7, p. 1970-1980 11 p.

Research output: Research - peer-reviewArticle

Microscopy
Embryonic Structures
Telencephalon
Magnetic Resonance Spectroscopy
Diffusion Magnetic Resonance Imaging
Diffusion Magnetic Resonance Imaging
Brain
Gray Matter
Somatosensory Cortex
Motor Cortex
2014
Limbic System
Magnetic Resonance Imaging
Brain
White Matter
Pathology
2013
Atlases
Software
Tomography
Magnetic Resonance Imaging
Brain
Diffusion Tensor Imaging
Atlases
Brain Stem
Gray Matter
Olivary Nucleus
2012

Magnetic Resonance Imaging of the Mouse Brain

Aggarwal, M., Zhang, J. & Mori, S. 2012 The Mouse Nervous System. Elsevier Inc., p. 473-488 16 p.

Research output: ResearchChapter

Magnetic Resonance Imaging
Brain
Neurosciences
Nervous System Physiological Phenomena
Optical Imaging

Probing mouse brain microstructure using oscillating gradient diffusion MRI

Aggarwal, M., Jones, M. V., Calabresi, P. A., Mori, S. & Zhang, J. Jan 2012 In : Magnetic Resonance in Medicine. 67, 1, p. 98-109 12 p.

Research output: Research - peer-reviewArticle

Diffusion Magnetic Resonance Imaging
Brain
Cuprizone
Corpus Callosum
Staining and Labeling

Spatiotemporal mapping of brain atrophy in mouse models of Huntington's disease using longitudinal in vivo magnetic resonance imaging

Aggarwal, M., Duan, W., Hou, Z., Rakesh, N., Peng, Q., Ross, C. A., Miller, M. I., Mori, S. & Zhang, J. May 1 2012 In : NeuroImage. 60, 4, p. 2086-2095 10 p.

Research output: Research - peer-reviewArticle

Brain Mapping
Huntington Disease
Atrophy
Magnetic Resonance Imaging
Brain

Structural insights into the rodent CNS via diffusion tensor imaging

Zhang, J., Aggarwal, M. & Mori, S. Jul 2012 In : Trends in Neurosciences. 35, 7, p. 412-421 10 p.

Research output: Research - peer-reviewArticle

Diffusion Tensor Imaging
Rodentia
Central Nervous System
Brain
Disease Progression
2011

Region-specific gene expression in early postnatal mouse thalamus

Yuge, K., Kataoka, A., Yoshida, A. C., Itoh, D., Aggarwal, M., Mori, S., Blackshaw, S. & Shimogori, T. Feb 15 2011 In : Journal of Comparative Neurology. 519, 3, p. 544-561 18 p.

Research output: Research - peer-reviewArticle

Thalamus
Gene Expression
Genes
Thalamic Nuclei
Geniculate Bodies

Structural MRI detects progressive regional brain atrophy and neuroprotective effects in N171-82Q Huntington's disease mouse model

Cheng, Y., Peng, Q., Hou, Z., Aggarwal, M., Zhang, J., Mori, S., Ross, C. A. & Duan, W. Jun 1 2011 In : NeuroImage. 56, 3, p. 1027-1034 8 p.

Research output: Research - peer-reviewArticle

Huntington Disease
Neuroprotective Agents
Atrophy
Brain
Biomarkers
2010

Magnetic resonance imaging-based mouse brain atlas and its applications

Aggarwal, M., Zhang, J. & Mori, S. 2010 Methods in Molecular Biology. Vol. 711, p. 251-270 20 p. (Methods in Molecular Biology; vol. 711)

Research output: ResearchChapter

Atlases
Magnetic Resonance Imaging
Brain
Diffusion Tensor Imaging
Histology

Three-dimensional diffusion tensor microimaging for anatomical characterization of the mouse brain

Aggarwal, M., Mori, S., Shimogori, T., Blackshaw, S. & Zhang, J. 2010 In : Magnetic Resonance in Medicine. 64, 1, p. 249-261 13 p.

Research output: Research - peer-reviewArticle

Brain
Diffusion Tensor Imaging
Gene Expression
Neuroanatomy
Neuroimaging
2009

Magnetic resonance imaging and micro-computed tomography combined atlas of developing and adult mouse brains for stereotaxic surgery

Aggarwal, M., Zhang, J., Miller, M. I., Sidman, R. L. & Mori, S. Sep 15 2009 In : Neuroscience. 162, 4, p. 1339-1350 12 p.

Research output: Research - peer-reviewArticle

Atlases
Tomography
Magnetic Resonance Imaging
Brain
Diffusion Tensor Imaging