Luciane Tsukamoto Kagohara

Instructor

20112020

Research output per year

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Research Output

Open Access
  • Cancerinsilico: An R/Bioconductor package for combining mathematical and statistical modeling to simulate time course bulk and single cell gene expression data in cancer

    Sherman, T. D., Kagohara, L. T., Cao, R., Cheng, R., Satriano, M., Considine, M., Krigsfeld, G., Ranaweera, R., Tang, Y., Jablonski, S. A., Stein-O’Brien, G., Gaykalova, D. A., Weiner, L. M., Chung, C. H. & Fertig, E. J., 2019, In : PLoS computational biology. 15, 4, e1006935.

    Research output: Contribution to journalArticle

    Open Access
  • Epigenetic regulation of gene expression in cancer: Techniques, resources and analysis

    Kagohara, L. T., Stein-O'Brien, G. L., Kelley, D., Flam, E., Wick, H. C., Danilova, L. V., Easwaran, H., Favorov, A. V., Qian, J., Gaykalova, D. A. & Fertig, E. J., Jan 1 2018, In : Briefings in Functional Genomics. 17, 1, p. 49-63 15 p.

    Research output: Contribution to journalReview article

  • Integrated time course omics analysis distinguishes immediate therapeutic response from acquired resistance

    Stein-O'Brien, G., Kagohara, L. T., Li, S., Thakar, M., Ranaweera, R., Ozawa, H., Cheng, H., Considine, M., Schmitz, S., Favorov, A. V., Danilova, L. V., Califano, J. A., Izumchenko, E., Gaykalova, D. A., Chung, C. H. & Fertig, E. J., May 23 2018, In : Genome Medicine. 10, 1, 37.

    Research output: Contribution to journalArticle

  • Splice Expression Variation Analysis (SEVA) for inter-tumor heterogeneity of gene isoform usage in cancer

    Afsari, B., Guo, T., Considine, M., Florea, L., Kagohara, L. T., Stein-O'Brien, G. L., Kelley, D., Flam, E., Zambo, K. D., Ha, P. K., Geman, D., Ochs, M. F., Califano, J. A., Gaykalova, D. A., Favorov, A. V. & Fertig, E. J., Jun 1 2018, In : Bioinformatics. 34, 11, p. 1859-1867 9 p.

    Research output: Contribution to journalArticle