Liudmila V Danilova

Research Associate

School of Medicine

Fingerprint Fingerprint is based on mining the text of the persons scientific documents to create an index of weighted terms, which defines the key subjects of each individual researcher.

Neoplasms Medicine & Life Sciences

Genome Medicine & Life Sciences

Genes Medicine & Life Sciences

Mutation Medicine & Life Sciences

Squamous Cell Carcinoma Medicine & Life Sciences

Neck Medicine & Life Sciences

Methylation Medicine & Life Sciences

DNA Methylation Medicine & Life Sciences

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Research Output 2001 2017

32 Article
2 Comment/debate

Comprehensive Molecular Characterization of Pheochromocytoma and Paraganglioma

Fishbein, L. , Leshchiner, I. , Walter, V. , Danilova, L. , Robertson, A. G. , Johnson, A. R. , Lichtenberg, T. M. , Murray, B. A. , Ghayee, H. K. , Else, T. , Ling, S. , Jefferys, S. R. , de Cubas, A. A. , Wenz, B. , Korpershoek, E. , Amelio, A. L. , Makowski, L. , Rathmell, W. K. , Gimenez-Roqueplo, A. P. , Giordano, T. J. & 212 others Asa, S. L., Tischler, A. S., Akbani, R., Ally, A., Amar, L., Amelio, A. L., Arachchi, H., Asa, S. L., Auchus, R. J., Auman, J. T., Baertsch, R., Balasundaram, M., Balu, S., Bartsch, D. K., Baudin, E., Bauer, T., Beaver, A., Benz, C., Beroukhim, R., Beuschlein, F., Bodenheimer, T., Boice, L., Bowen, J., Bowlby, R., Brooks, D., Carlsen, R., Carter, S., Cassol, C. A., Cherniack, A. D., Chin, L., Cho, J., Chuah, E., Chudamani, S., Cope, L., Crain, D., Curley, E., Danilova, L., de Cubas, A. A., de Krijger, R. R., Demchok, J. A., Deutschbein, T., Dhalla, N., Dimmock, D., Dinjens, W. N. M., Else, T., Eng, C., Eschbacher, J., Fassnacht, M., Felau, I., Feldman, M., Ferguson, M. L., Fiddes, I., Fishbein, L., Frazer, S., Gabriel, S. B., Gardner, J., Gastier-Foster, J. M., Gehlenborg, N., Gerken, M., Getz, G., Geurts, J., Ghayee, H. K., Gimenez-Roqueplo, A. P., Giordano, T. J., Goldman, M., Graim, K., Gupta, M., Haan, D., Hahner, S., Hantel, C., Haussler, D., Hayes, D. N., Heiman, D. I., Hoadley, K. A., Holt, R. A., Hoyle, A. P., Huang, M., Hunt, B., Hutter, C. M., Jefferys, S. R., Johnson, A. R., Jones, S. J. M., Jones, C. D., Kasaian, K., Kebebew, E., Kim, J., Kimes, P., Knijnenburg, T., Korpershoek, E., Lander, E., Lawrence, M. S., Lechan, R., Lee, D., Leraas, K. M., Lerario, A., Leshchiner, I., Lichtenberg, T. M., Lin, P., Ling, S., Liu, J., LiVolsi, V. A., Lolla, L., Lotan, Y., Lu, Y., Ma, Y., Maison, N., Makowski, L., Mallery, D., Mannelli, M., Marquard, J., Marra, M. A., Matthew, T., Mayo, M., Méatchi, T., Meng, S., Merino, M. J., Mete, O., Meyerson, M., Mieczkowski, P. A., Mills, G. B., Moore, R. A., Morozova, O., Morris, S., Mose, L. E., Mungall, A. J., Murray, B. A., Naresh, R., Nathanson, K. L., Newton, Y., Ng, S., Ni, Y., Noble, M. S., Nwariaku, F., Pacak, K., Parker, J. S., Paul, E., Penny, R., Perou, C. M., Perou, A. H., Pihl, T., Powers, J., Rabaglia, J., Radenbaugh, A., Ramirez, N. C., Rao, A., Rathmell, W. K., Riester, A., Roach, J., Robertson, A. G., Sadeghi, S., Saksena, G., Salama, S., Saller, C., Sandusky, G., Sbiera, S., Schein, J. E., Schumacher, S. E., Shelton, C., Shelton, T., Sheth, M., Shi, Y., Shih, J., Shmulevich, I., Simons, J. V., Sipahimalani, P., Skelly, T., Sofia, H. J., Sokolov, A., Soloway, M. G., Sougnez, C., Stuart, J., Sun, C., Swatloski, T., Tam, A., Tan, D., Tarnuzzer, R., Tarvin, K., Thiessen, N., Thorne, L. B., Timmers, H. J., Tischler, A. S., Tse, K., Uzunangelov, V., van Berkel, A., Veluvolu, U., Vicha, A., Voet, D., Waldmann, J., Walter, V., Wan, Y., Wang, Z., Wang, T. S., Weaver, J., Weinstein, J. N., Weismann, D., Wenz, B., Wilkerson, M. D., Wise, L., Wong, T., Wong, C., Wu, Y., Yang, L., Zelinka, T., Zenklusen, J. C., Zhang, J. . J., Zhang, W., Zhu, J., Zinzindohoué, F., Zmuda, E., Pacak, K., Nathanson, K. L. & Wilkerson, M. D. Feb 13 2017 In : Cancer Cell. 31, 2, p. 181-193 13 p.

Research output: Contribution to journal › Article

Paraganglioma

Pheochromocytoma

Genes

Germ-Line Mutation

Phosphotransferases

Erratum to: Tumor immune microenvironment characterization in clear cell renal cell carcinoma identifies prognostic and immunotherapeutically relevant messenger RNA signatures [Genome Biology. 17, (2016) (231)] DOI: 10.1186/s13059-016-1092-z

Şenbabaoglu, Y. , Gejman, R. S. , Winer, A. G. , Liu, M. , Van Allen, E. M. , de Velasco, G. , Miao, D. , Ostrovnaya, I. , Drill, E. , Luna, A. , Weinhold, N. , Lee, W. , Manley, B. J. , Khalil, D. N. , Kaffenberger, S. D. , Chen, Y. , Danilova, L. , Voss, M. H. , Coleman, J. A. , Russo, P. & 9 others Reuter, V. E., Chan, T. A., Cheng, E. H., Scheinberg, D. A., Li, M. O., Choueiri, T. K., Hsieh, J. J., Sander, C. & Hakimi, A. A. Mar 1 2017 In : Genome Biology. 18, 1, 46

Research output: Contribution to journal › Comment/debate

kidney cells

messenger RNA

carcinoma

Biological Sciences

neoplasms

GPX3 promoter methylation predicts platinum sensitivity in colorectal cancer

Pelosof, L., Yerram, S., Armstrong, T., Chu, N., Danilova, L., Yanagisawa, B., Hidalgo, M., Azad, N. & Herman, J. G. Jul 3 2017 In : Epigenetics. p. 1-11 11 p.

Research output: Contribution to journal › Article

Platinum

Methylation

Colorectal Neoplasms

Heterografts

Cell Line

Integrative Analysis Identifies Four Molecular and Clinical Subsets in Uveal Melanoma

Robertson, A. G. , Shih, J. , Yau, C. , Gibb, E. A. , Oba, J. , Mungall, K. L. , Hess, J. M. , Uzunangelov, V. , Walter, V. , Danilova, L. , Lichtenberg, T. M. , Kucherlapati, M. , Kimes, P. K. , Tang, M. , Penson, A. , Babur, O. , Akbani, R. , Bristow, C. A. , Hoadley, K. A. , Iype, L. & 191 others Chang, M. T., Abdel-Rahman, M. H., Akbani, R., Ally, A., Auman, J. T., Babur, O., Balasundaram, M., Balu, S., Benz, C., Beroukhim, R., Birol, I., Bodenheimer, T., Bowen, J., Bowlby, R., Bristow, C. A., Brooks, D., Carlsen, R., Cebulla, C. M., Chang, M. T., Cherniack, A. D., Chin, L., Cho, J., Chuah, E., Chudamani, S., Cibulskis, C., Cibulskis, K., Cope, L., Coupland, S. E., Danilova, L., Defreitas, T., Demchok, J. A., Desjardins, L., Dhalla, N., Esmaeli, B., Felau, I., Ferguson, M. L., Frazer, S., Gabriel, S. B., Gastier-Foster, J. M., Gehlenborg, N., Gerken, M., Gershenwald, J. E., Getz, G., Gibb, E. A., Griewank, K. G., Grimm, E. A., Hayes, D. N., Hegde, A. M., Heiman, D. I., Helsel, C., Hess, J. M., Hoadley, K. A., Hobensack, S., Holt, R. A., Hoyle, A. P., Hu, X., Hutter, C. M., Jager, M. J., Jefferys, S. R., Jones, C. D., Jones, S. J. M., Kandoth, C., Kasaian, K., Kim, J., Kimes, P. K., Kucherlapati, M., Kucherlapati, R., Lander, E., Lawrence, M. S., Lazar, A. J., Lee, S., Leraas, K. M., Lichtenberg, T. M., Lin, P., Liu, J., Liu, W., Lolla, L., Lu, Y., Iype, L., Ma, Y., Mahadeshwar, H. S., Mariani, O., Marra, M. A., Mayo, M., Meier, S., Meng, S., Meyerson, M., Mieczkowski, P. A., Mills, G. B., Moore, R. A., Mose, L. E., Mungall, A. J., Mungall, K. L., Murray, B. A., Naresh, R., Noble, M. S., Oba, J., Pantazi, A., Parfenov, M., Park, P. J., Parker, J. S., Penson, A., Perou, C. M., Pihl, T., Pilarski, R., Protopopov, A., Radenbaugh, A., Rai, K., Ramirez, N. C., Ren, X., Reynolds, S. M., Roach, J., Robertson, A. G., Roman-Roman, S., Roszik, J., Sadeghi, S., Saksena, G., Sastre, X., Schadendorf, D., Schein, J. E., Schoenfield, L., Schumacher, S. E., Seidman, J., Seth, S., Sethi, G., Sheth, M., Shi, Y., Shields, C., Shih, J., Shmulevich, I., Simons, J. V., Singh, A. D., Sipahimalani, P., Skelly, T., Sofia, H., Soloway, M. G., Song, X., Stern, M. H., Stuart, J., Sun, Q., Sun, H., Tam, A., Tan, D., Tang, M., Tang, J., Tarnuzzer, R., Taylor, B. S., Thiessen, N., Thorsson, V., Tse, K., Uzunangelov, V., Veluvolu, U., Verhaak, R. G. W., Voet, D., Walter, V., Wan, Y., Wang, Z., Weinstein, J. N., Wilkerson, M. D., Williams, M. D., Wise, L., Woodman, S. E., Wong, T., Wu, Y., Yang, L., Yang, L., Yau, C., Zenklusen, J. C., Zhang, J., Zhang, H., Zmuda, E., Cherniack, A. D., Benz, C., Mills, G. B., Verhaak, R. G. W., Griewank, K. G., Felau, I., Zenklusen, J. C., Gershenwald, J. E., Schoenfield, L., Lazar, A. J., Abdel-Rahman, M. H., Roman-Roman, S., Stern, M. H., Cebulla, C. M., Williams, M. D., Jager, M. J., Coupland, S. E., Esmaeli, B., Kandoth, C. & Woodman, S. E. Aug 14 2017 In : Cancer Cell. 32, 2, p. 204-220.e15

Research output: Contribution to journal › Article

Melanoma

Monosomy

DNA Methylation

Mutation

Neoplasms

Integrative computational analysis of transcriptional and epigenetic alterations implicates DTX1 as a putative tumor suppressor gene in HNSCC

Gaykalova, D. A., Zizkova, V., Guo, T., Tiscareno, I., Wei, Y., Vatapalli, R., Hennessey, P. T., Ahn, J., Danilova, L., Khan, Z., Bishop, J. A., Silvio Gutkind, J., Koch, W. M., Westra, W. H., Fertig, E. J., Ochs, M. F. & Califano, J. A. 2017 In : Oncotarget. 8, 9, p. 15349-15363 15 p.

Research output: Contribution to journal › Article

Tumor Suppressor Genes

Epigenomics

Squamous Cell Carcinoma

Neck

Neoplasms