Jeff Siewerdsen

Professor

1993 …2019
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Research Output 1993 2019

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2019

A Statistical Model for Rigid Image Registration Performance: The Influence of Soft-Tissue Deformation as a Confounding Noise Source

Ketcha, M. D., De Silva, T., Han, R., Uneri, A., Vogt, S., Kleinszig, G. & Siewerdsen, J. H., Sep 1 2019, In : IEEE transactions on medical imaging. 38, 9, p. 2016-2027 12 p.

Research output: Contribution to journalArticle

Image registration
Statistical Models
Noise
Tissue
Quantum noise

Atlas-based algorithm for automatic anatomical measurements in the knee

Brehler, M., Thawait, G., Kaplan, J., Ramsay, J., Tanaka, M., Demehri, S., Siewerdsen, J. & Zbijewski, W., Apr 1 2019, In : Journal of Medical Imaging. 6, 2, 026002.

Research output: Contribution to journalArticle

Atlases
Knee
Bone and Bones
Cone-Beam Computed Tomography
Workflow

Atlas-based automatic planning and 3D-2D fluoroscopic guidance in pelvic trauma surgery

Han, R., Uneri, A., De Silva, T., Ketcha, M., Goerres, J., Vogt, S., Kleinszig, G., Osgood, G. & Siewerdsen, J. H., May 2 2019, In : Physics in medicine and biology. 64, 9, 1 p.

Research output: Contribution to journalArticle

Atlases
Bone and Bones
Wounds and Injuries
Fluoroscopy
Statistical Models

Automatic pedicle screw planning using atlas-based registration of anatomy and reference trajectories

Vijayan, R., De Silva, T., Han, R., Zhang, X., Uneri, A., Doerr, S., Ketcha, M., Perdomo-Pantoja, A., Theodore, N. & Siewerdsen, J. H., Aug 21 2019, In : Physics in medicine and biology. 64, 16, 165020.

Research output: Contribution to journalArticle

Atlases
Anatomy
Spine
Cone-Beam Computed Tomography
Workflow

Dynamic fluence field modulation in computed tomography using multiple aperture devices

Gang, G. J., Mao, A., Wang, W., Siewerdsen, J. H., Mathews, A., Kawamoto, S., Levinson, R. & Stayman, J. W., May 21 2019, In : Physics in medicine and biology. 64, 10, 105024.

Research output: Contribution to journalArticle

Tomography
Equipment and Supplies
Tungsten
Artifacts
Noise
Computer-Assisted Image Processing
Spine
Artifacts
Cone-Beam Computed Tomography
Metals

Known-component metal artifact reduction (KC-MAR) for cone-beam CT

Uneri, A., Zhang, X., Yi, T., Stayman, J. W., Helm, P. A., Osgood, G. M., Theodore, N. & Siewerdsen, J. H., Aug 21 2019, In : Physics in medicine and biology. 64, 16, 165021.

Research output: Contribution to journalArticle

Artifacts
Metals
Cadaver
Cone-Beam Computed Tomography
Computer-Assisted Image Processing

Motion compensation in extremity cone-beam computed tomography

Sisniega Crespo, A., Thawait, G., Shakoor, D., Siewerdsen, J., Demehri, S. & Zbijewski, W., Jan 1 2019, In : Skeletal Radiology.

Research output: Contribution to journalArticle

Cone-Beam Computed Tomography
Extremities
Artifacts
Bone and Bones
Tendons

Surgineering: curriculum concept for experiential learning in upper-level biomedical engineering

Siewerdsen, J. H., Adrales, G. L., Anderson, W. S., Carey, J. P., Creighton, F. X., DiBrito, S. R., Galaiya, D., Marohn, M. R., McNutt, T. R., Osgood, G. M., Theodore, N., Weiss, C. R. & Viswanathan, A. N., Jan 1 2019, (Accepted/In press) In : International Journal of Computer Assisted Radiology and Surgery.

Research output: Contribution to journalArticle

Biomedical Engineering
Problem-Based Learning
Biomedical engineering
Curriculum
Curricula

Task-driven source-detector trajectories in cone-beam computed tomography: I. Theory and methods

Stayman, J. W., Capostagno, S., Gang, J. & Siewerdsen, J., Apr 1 2019, In : Journal of Medical Imaging. 6, 2, 025002.

Research output: Contribution to journalArticle

Cone-Beam Computed Tomography
Orbit
Noise
Anatomy
X-Rays

Task-driven source-detector trajectories in cone-beam computed tomography: II. Application to neuroradiology

Capostagno, S., Stayman, J. W., Jacobson, M., Ehtiati, T., Weiss, C. & Siewerdsen, J., Apr 1 2019, In : Journal of Medical Imaging. 6, 2, 025004.

Research output: Contribution to journalArticle

Cone-Beam Computed Tomography
Noise
Workflow
Arteriovenous Malformations
Robotics

Technical assessment of a mobile CT scanner for image-guided brachytherapy

Chernavsky, N. E., Morcos, M., Wu, P., Viswanathan, A. N. & Siewerdsen, J. H., Oct 1 2019, In : Journal of applied clinical medical physics. 20, 10, p. 187-200 14 p.

Research output: Contribution to journalArticle

Open Access
Brachytherapy
Artifacts
scanners
artifacts
Image quality

Volume-of-interest imaging with dynamic fluence modulation using multiple aperture devices

Wang, W., Gang, J., Siewerdsen, J., Levinson, R., Kawamoto, S. & Stayman, J. W., Jul 1 2019, In : Journal of Medical Imaging. 6, 3, 033504.

Research output: Contribution to journalArticle

Cone-Beam Computed Tomography
Tomography
Equipment and Supplies
Noise
X-Rays
2018

A line fiducial method for geometric calibration of cone-beam CT systems with diverse scan trajectories

Jacobson, M. W., Ketcha, M. D., Capostagno, S., Martin, A., Uneri, A., Goerres, J., De Silva, T., Reaungamornrat, S., Han, R., Manbachi, A., Stayman, J. W., Vogt, S., Kleinszig, G. & Siewerdsen, J. H., Jan 1 2018, In : Physics in Medicine and Biology. 63, 2, 025030.

Research output: Contribution to journalArticle

Cone-Beam Computed Tomography
Orbit
Calibration
Arm
Head

A momentum-based diffeomorphic demons framework for deformable MR-CT image registration

Han, R., De Silva, T., Ketcha, M., Uneri, A. & Siewerdsen, J. H., Oct 24 2018, In : Physics in Medicine and Biology. 63, 21, 215006.

Research output: Contribution to journalArticle

Neurosurgery
Nonparametric Statistics
Cerebrospinal Fluid
Brain
Clinical Studies

Clinical Translation of the LevelCheck Decision Support Algorithm for Target Localization in Spine Surgery

Manbachi, A., De Silva, T., Uneri, A., Jacobson, M., Goerres, J., Ketcha, M., Han, R., Aygun, N., Thompson, D., Ye, X., Vogt, S., Kleinszig, G., Molina, C., Iyer, R., Garzon-Muvdi, T., Raber, M. R., Groves, M., Wolinsky, J. P. & Siewerdsen, J. H., Jan 1 2018, (Accepted/In press) In : Annals of Biomedical Engineering.

Research output: Contribution to journalArticle

Surgery
Labels
Operating rooms
Labeling
Libraries
Education
Calibration
Research
Computer-Aided Design

Dynamic fluence field modulation for miscentered patients in computed tomography

Mao, A., Gang, J., Shyr, W., Levinson, R., Siewerdsen, J., Kawamoto, S. & Stayman, J. W., Oct 1 2018, In : Journal of Medical Imaging. 5, 4, 043501.

Research output: Contribution to journalArticle

Tomography
Equipment and Supplies
Noise
X-Rays

Image quality and dose characteristics for an O-arm intraoperative imaging system with model-based image reconstruction

Uneri, A., Zhang, X., Yi, T., Stayman, J. W., Helm, P. A., Theodore, N. & Siewerdsen, J. H., Jan 1 2018, (Accepted/In press) In : Medical Physics.

Research output: Contribution to journalArticle

Computer-Assisted Image Processing
Calibration
Arm
Head
Radiation

Mobile C-Arm with a CMOS detector: Technical assessment of fluoroscopy and Cone-Beam CT imaging performance

Sheth, N. M., Zbijewski, W., Jacobson, M. W., Abiola, G., Kleinszig, G., Vogt, S., Soellradl, S., Bialkowski, J., Anderson, W. S., Weiss, C., Osgood, G. & Siewerdsen, J., Jan 1 2018, (Accepted/In press) In : Medical Physics.

Research output: Contribution to journalArticle

Fluoroscopy
Noise
Cone-Beam Computed Tomography
Cadaver
Orthopedics

Predicting image properties in penalized-likelihood reconstructions of flat-panel CBCT

Wang, W., Gang, J., Siewerdsen, J. & Stayman, J. W., Jan 1 2018, (Accepted/In press) In : Medical Physics.

Research output: Contribution to journalArticle

Noise
Cone-Beam Computed Tomography
X-Rays
Computer-Assisted Image Processing
Validation Studies

Real-time, image-based slice-to-volume registration for ultrasound-guided spinal intervention

De Silva, T., Uneri, A., Zhang, X., Ketcha, M., Han, R., Sheth, N., Martin, A., Vogt, S., Kleinszig, G., Belzberg, A., Sciubba, D. M. & Siewerdsen, J. H., Oct 29 2018, In : Physics in Medicine and Biology. 63, 21, 215016.

Research output: Contribution to journalArticle

Cadaver
Magnetic Resonance Spectroscopy
Spinal Puncture
Workflow
Needles

Reconstruction-of-difference (RoD) imaging for cone-beam CT neuro-angiography

Wu, P., Stayman, J. W., Mow, M., Zbijewski, W., Sisniega Crespo, A., Aygun, N., Stevens, R. D., Foos, D., Wang, X. & Siewerdsen, J., May 29 2018, In : Physics in Medicine and Biology. 63, 11, 115004.

Research output: Contribution to journalArticle

Point-of-Care Systems
Cone-Beam Computed Tomography
Angiography
Stroke
Pathology

Robotic drill guide positioning using known-component 3D-2D image registration

Yi, T., Ramchandran, V., Siewerdsen, J. H. & Uneri, A., Apr 1 2018, In : Journal of Medical Imaging. 5, 2, 021212.

Research output: Contribution to journalArticle

Mandrillus
Robotics
Cadaver
X-Rays
Workflow
Statistical Models
Least-Squares Analysis
Cone-Beam Computed Tomography
Weights and Measures
Subdural Hematoma

Virtual fluoroscopy for intraoperative C-arm positioning and radiation dose reduction

De Silva, T., Punnoose, J., Uneri, A., Mahesh, M., Goerres, J., Jacobson, M., Ketcha, M. D., Manbachi, A., Vogt, S., Kleinszig, G., Khanna, A. J., Wolinksy, J. P., Siewerdsen, J. H. & Osgood, G., Jan 1 2018, In : Journal of Medical Imaging. 5, 1, 015005.

Research output: Contribution to journalArticle

Fluoroscopy
Arm
Radiation
Skin
Workflow
2017

Correction of patient motion in cone-beam CT using 3D-2D registration

Ouadah, S., Jacobson, M., Stayman, J. W., Ehtiati, T., Weiss, C. & Siewerdsen, J., Nov 9 2017, In : Physics in Medicine and Biology. 62, 23, p. 8813-8831 19 p.

Research output: Contribution to journalArticle

Artifacts
Cone-Beam Computed Tomography
Head
Calibration
Likelihood Functions

Development and testing of a database of NIH research funding of AAPM members: A report from the AAPM Working Group for the Development of a Research Database (WGDRD)

Whelan, B., Moros, E. G., Fahrig, R., Deye, J., Yi, T., Woodward, M., Keall, P. & Siewerdsen, J., Apr 1 2017, In : Medical Physics. 44, 4, p. 1590-1601 12 p.

Research output: Contribution to journalArticle

National Institutes of Health (U.S.)
Medicine
Databases
Research
Data Mining

Effects of Image Quality on the Fundamental Limits of Image Registration Accuracy

Ketcha, M. D., De Silva, T., Han, R., Uneri, A., Goerres, J., Jacobson, M., Vogt, S., Kleinszig, G. & Siewerdsen, J. H., Jul 10 2017, (Accepted/In press) In : IEEE Transactions on Medical Imaging.

Research output: Contribution to journalArticle

Image registration
Image quality
Imaging techniques
Signal-To-Noise Ratio
Power spectrum

Flexible Adult Acquired Flatfoot Deformity: Comparison Between Weight-Bearing and Non-Weight-Bearing Measurements Using Cone-Beam Computed Tomography

de Cesar Netto, C., Schon, L. C., Thawait, G., da Fonseca, L. F., Chinanuvathana, A., Zbijewski, W., Siewerdsen, J. & Demehri, S., Sep 20 2017, In : The Journal of bone and joint surgery. American volume. 99, 18, p. e98

Research output: Contribution to journalArticle

Flatfoot
Cone-Beam Computed Tomography
Weight-Bearing
Confidence Intervals
Nonparametric Statistics

Image quality and dose for a multisource cone-beam CT extremity scanner

Gang, J., Zbijewski, W., Mahesh, M., Thawait, G., Packard, N., Yorkston, J., Demehri, S. & Siewerdsen, J., Jan 1 2017, (Accepted/In press) In : Medical Physics.

Research output: Contribution to journalArticle

Cone-Beam Computed Tomography
Artifacts
Extremities
Electrodes
Joints

Image quality of cone beam computed tomography for evaluation of extremity fractures in the presence of metal hardware: Visual grading characteristics analysis

Osgood, G., Thawait, G., Hafezi-Nejad, N., Shakoor, D., Shaner, A., Yorkston, J., Zbijewski, W., Siewerdsen, J. & Demehri, S., 2017, In : British Journal of Radiology. 90, 1073, 20160539.

Research output: Contribution to journalArticle

Cone-Beam Computed Tomography
Extremities
Metals
Fracture Healing
Radiography

Integration of free-hand 3D ultrasound and mobile C-arm cone-beam CT: Feasibility and characterization for real-time guidance of needle insertion

Marinetto, E., Uneri, A., De Silva, T., Reaungamornrat, S., Zbijewski, W., Sisniega, A., Vogt, S., Kleinszig, G., Pascau, J. & Siewerdsen, J. H., Jun 1 2017, In : Computerized Medical Imaging and Graphics. 58, p. 13-22 10 p.

Research output: Contribution to journalArticle

Needles
Cones
Arm
Hand
Ultrasonics

Intraoperative evaluation of device placement in spine surgery using known-component 3D-2D image registration

Uneri, A., De Silva, T., Goerres, J., Jacobson, M. W., Ketcha, M. D., Reaungamornrat, S., Kleinszig, G., Vogt, S., Khanna, A. J., Osgood, G. M., Wolinsky, J. P. & Siewerdsen, J. H., Mar 28 2017, In : Physics in Medicine and Biology. 62, 8, p. 3330-3351 22 p.

Research output: Contribution to journalArticle

Spine
Calibration
Equipment and Supplies
Workflow
Fluoroscopy

Modeling and evaluation of a high-resolution CMOS detector for cone-beam CT of the extremities

Cao, Q., Sisniega Crespo, A., Brehler, M., Stayman, J. W., Yorkston, J., Siewerdsen, J. & Zbijewski, W., Jan 1 2017, (Accepted/In press) In : Medical Physics.

Research output: Contribution to journalArticle

Semiconductors
Cone-Beam Computed Tomography
Oxides
Extremities
Metals
Extremities
Cone-Beam Computed Tomography
Bone and Bones
Artifacts
Articular Range of Motion
Computer-Assisted Image Processing
Artifacts
Head
Cone-Beam Computed Tomography
Intracranial Hemorrhages

Multi-stage 3D-2D registration for correction of anatomical deformation in image-guided spine surgery

Ketcha, M. D., De Silva, T., Uneri, A., Jacobson, M. W., Goerres, J., Kleinszig, G., Vogt, S., Wolinsky, J. P. & Siewerdsen, J. H., May 11 2017, In : Physics in Medicine and Biology. 62, 11, p. 4604-4622 19 p.

Research output: Contribution to journalArticle

Computer-Assisted Surgery
Spine
Spinal Curvatures
Patient Positioning
Workflow

Planning, guidance, and quality assurance of pelvic screw placement using deformable image registration

Goerres, J., Uneri, A., Jacobson, M., Ramsay, B., De Silva, T., Ketcha, M., Han, R., Manbachi, A., Vogt, S., Kleinszig, G., Wolinsky, J. P., Osgood, G. & Siewerdsen, J. H., Nov 13 2017, In : Physics in Medicine and Biology. 62, 23, p. 9018-9038 21 p.

Research output: Contribution to journalArticle

Fluoroscopy
Equipment and Supplies
Workflow
Bone and Bones
Atlases
Metals
X-Rays
Artifacts
Equipment and Supplies
Cadaver

Registration of MRI to intraoperative radiographs for target localization in spinal interventions

De Silva, T., Uneri, A., Ketcha, M. D., Reaungamornrat, S., Goerres, J., Jacobson, M. W., Vogt, S., Kleinszig, G., Khanna, A. J., Wolinsky, J. P. & Siewerdsen, J. H., Jan 21 2017, In : Physics in Medicine and Biology. 62, 2, p. 684-701 18 p.

Research output: Contribution to journalArticle

Spine
Workflow
Research Ethics Committees
Seeds
Thorax

Spinal pedicle screw planning using deformable atlas registration

Goerres, J., Uneri, A., De Silva, T., Ketcha, M., Reaungamornrat, S., Jacobson, M., Vogt, S., Kleinszig, G., Osgood, G., Wolinsky, J. P. & Siewerdsen, J. H., Mar 14 2017, In : Physics in Medicine and Biology. 62, 7, p. 2871-2891 21 p.

Research output: Contribution to journalArticle

Atlases
Spine
Equipment and Supplies
Automation
Patient Selection

Task-based statistical image reconstruction for high-quality cone-beam CT

Dang, H., Stayman, J. W., Xu, J., Zbijewski, W., Sisniega Crespo, A., Mow, M., Wang, X., Foos, D. H., Aygun, N., Koliatsos, V. E. & Siewerdsen, J., Nov 1 2017, In : Physics in Medicine and Biology. 62, 22, p. 8693-8719 27 p.

Research output: Contribution to journalArticle

Computer-Assisted Image Processing
Cone-Beam Computed Tomography
Intracranial Hemorrhages
Least-Squares Analysis
Point-of-Care Systems
Anisotropy
Abdomen
Noise
Task Performance and Analysis
Kidney
Abdomen
Tomography
Modulation
Weights and Measures
Imaging techniques
2016

3D-2D image registration for target localization in spine surgery: Investigation of similarity metrics providing robustness to content mismatch

De Silva, T., Uneri, A., Ketcha, M. D., Reaungamornrat, S., Kleinszig, G., Vogt, S., Aygun, N., Lo, S. F., Wolinsky, J. P. & Siewerdsen, J. H., Mar 18 2016, In : Physics in Medicine and Biology. 61, 8, p. 3009-3025 17 p.

Research output: Contribution to journalArticle

Spine
Tomography
Computer-Assisted Surgery
Workflow
Research Ethics Committees

Evaluation of detector readout gain mode and bowtie filters for cone-beam CT imaging of the head

Xu, J., Sisniega Crespo, A., Zbijewski, W., Dang, H., Stayman, J. W., Wang, X., Foos, D. H., Aygun, N., Koliatsos, V. E. & Siewerdsen, J., Jul 20 2016, In : Physics in Medicine and Biology. 61, 16, p. 5973-5992 20 p.

Research output: Contribution to journalArticle

Noise
Head
Cone-Beam Computed Tomography
Intracranial Hemorrhages
Point-of-Care Systems

MIND Demons: Symmetric Diffeomorphic Deformable Registration of MR and CT for Image-Guided Spine Surgery

Reaungamornrat, S., De Silva, T., Uneri, A., Vogt, S., Kleinszig, G., Khanna, A. J., Wolinsky, J. P., Prince, J. L. & Siewerdsen, J. H., Nov 1 2016, In : IEEE Transactions on Medical Imaging. 35, 11, p. 2413-2424 12 p., 7484313.

Research output: Contribution to journalArticle

Computer-Assisted Surgery
Surgery
Spine
Newton-Raphson method
Anatomy

Modeling and design of a cone-beam CT head scanner using task-based imaging performance optimization

Xu, J., Sisniega Crespo, A., Zbijewski, W., Dang, H., Stayman, J. W., Wang, X., Foos, D. H., Aygun, N., Koliatsos, V. E. & Siewerdsen, J., Mar 29 2016, In : Physics in Medicine and Biology. 61, 8, p. 3180-3207 28 p.

Research output: Contribution to journalArticle

Cone-Beam Computed Tomography
Intracranial Hemorrhages
Head
Semiconductors
Point-of-Care Systems

Multiresolution iterative reconstruction in high-resolution extremity cone-beam CT

Cao, Q., Zbijewski, W., Sisniega Crespo, A., Yorkston, J., Siewerdsen, J. & Stayman, J. W., Oct 3 2016, In : Physics in Medicine and Biology. 61, 20, p. 7263-7281 19 p.

Research output: Contribution to journalArticle

Cone-Beam Computed Tomography
Artifacts
Extremities
Least-Squares Analysis