1976 …2019

Research output per year

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2019

Ramachandran maps for side chains in globular proteins

Rose, G. D., Jan 1 2019, (Accepted/In press) In : Proteins: Structure, Function and Bioinformatics.

Research output: Contribution to journalArticle

What is life? Part II

Rose, G. D., Jan 1 2019, (Accepted/In press) In : Proteins: Structure, Function and Bioinformatics.

Research output: Contribution to journalArticle

2016

How the hydrophobic factor drives protein folding

Baldwin, R. L. & Rose, G. D., Nov 1 2016, In : Proceedings of the National Academy of Sciences of the United States of America. 113, 44, p. 12462-12466 5 p.

Research output: Contribution to journalArticle

2015

On interpretation of protein X-ray structures: Planarity of the peptide unit

Chellapa, G. D. & Rose, G. D., Sep 1 2015, In : Proteins: Structure, Function and Bioinformatics. 83, 9, p. 1687-1692 6 p.

Research output: Contribution to journalArticle

2012

A thermodynamic definition of protein domains

Porter, L. L. & Rose, G. D., Jun 12 2012, In : Proceedings of the National Academy of Sciences of the United States of America. 109, 24, p. 9420-9425 6 p.

Research output: Contribution to journalArticle

Reducing the dimensionality of the protein-folding search problem

Chellapa, G. D. & Rose, G. D., Aug 1 2012, In : Protein Science. 21, 8, p. 1231-1240 10 p.

Research output: Contribution to journalArticle

2011

Counting peptide-water hydrogen bonds in unfolded proteins

Gong, H., Porter, L. L. & Rose, G. D., Feb 1 2011, In : Protein Science. 20, 2, p. 417-427 11 p.

Research output: Contribution to journalArticle

2010

Dry molten globule intermediates and the mechanism of protein unfolding

Baldwin, R. L., Frieden, C. & Rose, G. D., Oct 1 2010, In : Proteins: Structure, Function and Bioinformatics. 78, 13, p. 2725-2737 13 p.

Research output: Contribution to journalArticle

Physical-chemical determinants of coil conformations in globular proteins

Perskie, L. L. & Rose, G. D., Jun 1 2010, In : Protein Science. 19, 6, p. 1127-1136 10 p.

Research output: Contribution to journalArticle

2009

In Memoriam: Frederic M. Richards (1925-2009).

Rose, G. D., May 15 2009, In : Proteins. 75, 3, p. 535-539 5 p.

Research output: Contribution to journalArticle

2008

Structures, basins, and energies: A deconstruction of the Protein Coil Library

Perskie, L. L., Street, T. O. & Rose, G. D., Jul 1 2008, In : Protein Science. 17, 7, p. 1151-1161 11 p.

Research output: Contribution to journalArticle

2007

Building native protein conformation from NMR backbone chemical shifts using Monte Carlo fragment assembly

Gong, H., Shen, Y. & Rose, G. D., Aug 1 2007, In : Protein Science. 16, 8, p. 1515-1521 7 p.

Research output: Contribution to journalArticle

Physical-chemical determinants of turn conformations in globular proteins

Street, T. O., Fitzkee, N. C., Perskie, L. L. & Rose, G. D., Aug 1 2007, In : Protein Science. 16, 8, p. 1720-1727 8 p.

Research output: Contribution to journalArticle

2006

A molecular mechanism for osmolyte-induced protein stability

Street, T. O., Bolen, D. W. & Rose, G. D., Sep 19 2006, In : Proceedings of the National Academy of Sciences of the United States of America. 103, 38, p. 13997-14002 6 p.

Research output: Contribution to journalArticle

Secondary structure determines protein topology

Fleming, P. J., Gong, H. & Rose, G. D., Aug 3 2006, In : Protein Science. 15, 8, p. 1829-1834 6 p.

Research output: Contribution to journalArticle

The Role of Introns in Repeat Protein Gene Formation

Street, T. O., Rose, G. D. & Barrick, D., Jul 7 2006, In : Journal of molecular biology. 360, 2, p. 258-266 9 p.

Research output: Contribution to journalArticle

2005

A novel method reveals that solvent water favors polyproline II over β-strand conformation in peptides and unfolded proteins: Conditional hydrophobic accessible surface area (CHASA)

Fleming, P. J., Fitzkee, N. C., Mezei, M., Srinivasan, R. & Rose, G. D., Jan 1 2005, In : Protein Science. 14, 1, p. 111-118 8 p.

Research output: Contribution to journalArticle

Are proteins made from a limited parts list?

Fitzkee, N. C., Fleming, P. J., Gong, H., Panasik, N., Street, T. O. & Rose, G. D., Feb 2005, In : Trends in biochemical sciences. 30, 2, p. 73-80 8 p.

Research output: Contribution to journalArticle

Building native protein conformation from highly approximate backbone torsion angles

Gong, H., Fleming, P. J. & Rose, G. D., Nov 8 2005, In : Proceedings of the National Academy of Sciences of the United States of America. 102, 45, p. 16227-16232 6 p.

Research output: Contribution to journalArticle

Do all backbone polar groups in proteins form hydrogen bonds?

Fleming, P. J. & Rose, G. D., Jul 1 2005, In : Protein Science. 14, 7, p. 1911-1917 7 p.

Research output: Contribution to journalArticle

Does secondary structure determine tertiary structure in proteins?

Gong, H. & Rose, G. D., Nov 1 2005, In : Proteins: Structure, Function and Genetics. 61, 2, p. 338-343 6 p.

Research output: Contribution to journalArticle

Hydrogen-bonded turns in proteins: The case for a recount

Panasik, N., Fleming, P. J. & Rose, G. D., Nov 1 2005, In : Protein Science. 14, 11, p. 2910-2914 5 p.

Research output: Contribution to journalArticle

Sterics and solvation winnow accessible conformational space for unfolded proteins

Fitzkee, N. C. & Rose, G. D., Nov 4 2005, In : Journal of molecular biology. 353, 4, p. 873-887 15 p.

Research output: Contribution to journalArticle

The protein coil library: A structural database of nonhelix, nonstrand fragments derived from the PDB

Fitzkee, N. C., Fleming, P. J. & Rose, G. D., Mar 1 2005, In : Proteins: Structure, Function and Genetics. 58, 4, p. 852-854 3 p.

Research output: Contribution to journalArticle

2004

Ab Initio Protein Folding Using LINUS

Srinivasan, R., Fleming, P. J. & Rose, G. D., Jan 1 2004, In : Methods in Enzymology. 383, p. 48-66 19 p.

Research output: Contribution to journalArticle

Polyproline II Helix Is the Preferred Conformation for Unfolded Polyalanine in Water

Mezei, M., Fleming, P. J., Srinivasan, R. & Rose, G. D., May 15 2004, In : Proteins: Structure, Function and Genetics. 55, 3, p. 502-507 6 p.

Research output: Contribution to journalArticle

Reassessing random-coil statistics in unfolded proteins

Fitzkee, N. C. & Rose, G. D., Aug 24 2004, In : Proceedings of the National Academy of Sciences of the United States of America. 101, 34, p. 12497-12502 6 p.

Research output: Contribution to journalArticle

Steric restrictions in protein folding: An α-helix cannot be followed by a contiguous β-strand

Fitzkee, N. C. & Rose, G. D., Mar 1 2004, In : Protein Science. 13, 3, p. 633-639 7 p.

Research output: Contribution to journalArticle

2003

Local secondary structure content predicts folding rates for simple, two-state proteins

Gong, H., Isom, D. G., Srinivasan, R. & Rose, G. D., Apr 11 2003, In : Journal of molecular biology. 327, 5, p. 1149-1154 6 p.

Research output: Contribution to journalArticle

2002

Ab initio prediction of protein structure using LINUS

Srinivasan, R. & Rose, G. D., Jun 1 2002, In : Proteins: Structure, Function and Genetics. 47, 4, p. 489-495 7 p.

Research output: Contribution to journalArticle

A simple model for polyproline II structure in unfolded states of alanine-based peptides

Pappu, R. V. & Rose, G. D., Oct 1 2002, In : Protein Science. 11, 10, p. 2437-2455 19 p.

Research output: Contribution to journalArticle

Cloning, expression, and initial characterization of a novel cytokine-like gene family

Zhu, Y., Xu, G., Patel, A., McLaughlin, M. M., Silverman, C., Knecht, K. A., Sweitzer, S., Li, X., McDonnell, P., Mirabile, R., Zimmerman, D., Boyce, R., Tierney, L. A., Hu, E., Livi, G. P., Wolf, B. A., Abdel-Meguid, S. S., Rose, G. D., Aurora, R., Hensley, P. & 2 others, Briggs, M. & Young, P. R., Jan 1 2002, In : Genomics. 80, 2, p. 144-150 7 p.

Research output: Contribution to journalArticle

Methinks it is like a folding curve

Srinivasan, R. & Rose, G. D., Dec 10 2002, In : Biophysical Chemistry. 101-102, p. 167-171 5 p.

Research output: Contribution to journalArticle

Polyproline II structure in a sequence of seven alanine residues

Shi, Z., Anders Olson, C., Rose, G. D., Baldwin, R. L. & Kallenbach, N. R., Jul 9 2002, In : Proceedings of the National Academy of Sciences of the United States of America. 99, 14, p. 9190-9195 6 p.

Research output: Contribution to journalArticle

Recursive domains in proteins

Przytycka, T., Srinivasan, R. & Rose, G. D., Jan 29 2002, In : Protein Science. 11, 2, p. 409-417 9 p.

Research output: Contribution to journalArticle

2001

Perspective.

Rose, G. D., Aug 2001, In : Protein science : a publication of the Protein Society. 10, 8, p. 1691-1693 3 p.

Research output: Contribution to journalArticle

2000

Is counterion delocalization responsible for collapse in RNA folding?

Murthy, V. L. & Rose, G. D., Nov 28 2000, In : Biochemistry. 39, 47, p. 14365-14370 6 p.

Research output: Contribution to journalArticle

The Flory isolated-pair hypothesis is not valid for polypeptide chains: Implications for protein folding

Pappu, R. V., Srinivasan, R. & Rose, G. D., Nov 7 2000, In : Proceedings of the National Academy of Sciences of the United States of America. 97, 23, p. 12565-12570 6 p.

Research output: Contribution to journalArticle

1999

A complete conformational map for RNA

Murthy, V. L., Srinivasan, R., Draper, D. E. & Rose, G. D., Aug 13 1999, In : Journal of molecular biology. 291, 2, p. 313-327 15 p.

Research output: Contribution to journalArticle

A physical basis for protein secondary structure

Srinivasan, R. & Rose, G. D., Dec 7 1999, In : Proceedings of the National Academy of Sciences of the United States of America. 96, 25, p. 14258-14263 6 p.

Research output: Contribution to journalArticle

A protein taxonomy based on secondary structure

Przytycka, T., Aurora, R. & Rose, G. D., Jul 19 1999, In : Nature structural biology. 6, 7, p. 672-682 11 p.

Research output: Contribution to journalArticle

Identifying two ancient enzymes in Archaea using predicted secondary structure alignment

Xu, H., Aurora, R., Rose, G. D. & White, R. H., Aug 10 1999, In : Nature structural biology. 6, 8, p. 750-754 5 p.

Research output: Contribution to journalArticle

1998
1997

Modeling unfolded states of proteins and peptides. II. Backbone solvent accessibility

Creamer, T. P., Srinivasan, R. & Rose, G. D., Mar 11 1997, In : Biochemistry. 36, 10, p. 2832-2835 4 p.

Research output: Contribution to journalArticle

Protein folding and the Paracelsus challenge

Rose, G. D., Jan 1 1997, In : Nature structural biology. 4, 7, p. 512-514 3 p.

Research output: Contribution to journalArticle

1995

Evaluation of interactions between residues in α-helices by exhaustive conformational search

Creamer, T. P., Srinivasan, R. & Rose, G. D., Jan 1 1995, In : Techniques in Protein Chemistry. 6, C, p. 443-450 8 p.

Research output: Contribution to journalArticle

Interactions between hydrophobic side chains within α‐helices

Creamer, T. P. & Rose, G. D., Jul 1995, In : Protein Science. 4, 7, p. 1305-1314 10 p.

Research output: Contribution to journalArticle

LINUS: A hierarchic procedure to predict the fold of a protein

Srinivasan, R. & Rose, G. D., Jun 1995, In : Proteins: Structure, Function, and Bioinformatics. 22, 2, p. 81-99 19 p.

Research output: Contribution to journalArticle