Elana Fertig

Assistant Professor

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Neoplasms Medicine & Life Sciences
Genome Medicine & Life Sciences
Methylation Medicine & Life Sciences
Genes Medicine & Life Sciences
Gene Expression Medicine & Life Sciences
Head and Neck Neoplasms Medicine & Life Sciences
Epigenomics Medicine & Life Sciences
DNA Methylation Medicine & Life Sciences

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Research Output 2006 2018

Digitizing omics profiles by divergence from a baseline

Dinalankara, W., Ke, Q., Xu, Y., Ji, L., Pagane, N., Lien, A., Matam, T., Fertig, E. J., Price, N. D., Younes, L., Marchionni, L. & Geman, D., May 1 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 18, p. 4545-4552 8 p.

Research output: Contribution to journalArticle

disease detection
disease course

Discovery and development of differentially methylated regions in human papillomavirus-related oropharyngeal squamous cell carcinoma

Ren, S., Gaykalova, D., Wang, J., Guo, T., Danilova, L., Favorov, A., Fertig, E., Bishop, J., Khan, Z., Flam, E., Wysocki, P. T., DeJong, P., Ando, M., Liu, C., Sakai, A., Fukusumi, T., Haft, S., Sadat, S. & Califano, J. A., Jan 1 2018, (Accepted/In press) In : International Journal of Cancer.

Research output: Contribution to journalArticle

Squamous Cell Carcinoma
DNA Methylation

Enter the Matrix: Factorization Uncovers Knowledge from Omics

Stein-O'Brien, G. L., Arora, R., Culhane, A. C., Favorov, A. V., Garmire, L. X., Greene, C. S., Goff, L. A., Li, Y., Ngom, A., Ochs, M. F., Xu, Y. & Fertig, E. J., Jan 1 2018, (Accepted/In press) In : Trends in Genetics.

Research output: Contribution to journalArticle

Epigenetic regulation of gene expression in cancer: Techniques, resources and analysis

Kagohara, L. T., Stein-O'Brien, G. L., Kelley, D., Flam, E., Wick, H. C., Danilova, L. V., Easwaran, H., Favorov, A. V., Qian, J., Gaykalova, D. A. & Fertig, E. J., Jan 1 2018, In : Briefings in Functional Genomics. 17, 1, p. 49-63 15 p.

Research output: Contribution to journalReview article

Gene Expression Regulation
Gene expression

Integrated time course omics analysis distinguishes immediate therapeutic response from acquired resistance

Stein-O'Brien, G., Kagohara, L. T., Li, S., Thakar, M., Ranaweera, R., Ozawa, H., Cheng, H., Considine, M., Schmitz, S., Favorov, A. V., Danilova, L. V., Califano, J. A., Izumchenko, E., Gaykalova, D. A., Chung, C. H. & Fertig, E. J., May 23 2018, In : Genome Medicine. 10, 1, 37

Research output: Contribution to journalArticle

DNA Methylation
Molecular Dynamics Simulation
RNA Sequence Analysis