Bongsoo Park

Research Associate

20072020

Research output per year

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Research Output

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Article
2020

Early Diagnosis and Management of Nitrogen Deficiency in Plants Utilizing Raman Spectroscopy

Huang, C. H., Singh, G. P., Park, S. H., Chua, N. H., Ram, R. J. & Park, B. S., Jun 5 2020, In : Frontiers in Plant Science. 11, 663.

Research output: Contribution to journalArticle

Open Access
Open Access

Systemically-delivered biodegradable PLGA alters gut microbiota and induces transcriptomic reprogramming in the liver in an obesity mouse model

Chaplin, A., Gao, H., Asase, C., Rengasamy, P., Park, B., Skander, D., Bebek, G., Rajagopalan, S. & Maiseyeu, A., Dec 1 2020, In : Scientific reports. 10, 1, 13786.

Research output: Contribution to journalArticle

Open Access
2019

Air pollution-derived particulate matter dysregulates hepatic Krebs cycle, glucose and lipid metabolism in mice

Reyes-Caballero, H., Rao, X., Sun, Q., Warmoes, M. O., Penghui, L., Sussan, T. E., Park, B., Fan, T. W. M., Maiseyeu, A., Rajagopalan, S., Girnun, G. D. & Biswal, S., Dec 1 2019, In : Scientific reports. 9, 1, 17423.

Research output: Contribution to journalArticle

Open Access

Immune modulation by chronic exposure to waterpipe smoke and immediate-early gene regulation in murine lungs

Reyes-Caballero, H., Park, B., Loube, J., Sanchez, I., Vinayachandran, V., Choi, Y., Woo, J., Edwards, J., Brinkman, M. C., Sussan, T. E., Mitzner, W. & Biswal, S., Jan 1 2019, (Accepted/In press) In : Tobacco control.

Research output: Contribution to journalArticle

2018

Nitrate reductases are relocalized to the nucleus by atSIZ1 and their levels are negatively regulated by COP1 and ammonium

Kim, J. Y., Park, B., Park, S. W., Lee, H. Y., Song, J. T. & Seo, H. S., Apr 15 2018, In : International Journal of Molecular Sciences. 19, 4, 1202.

Research output: Contribution to journalArticle

Widespread and precise reprogramming of yeast protein-genome interactions in response to heat shock

Vinayachandran, V., Reja, R., Rossi, M. J., Park, B., Rieber, L., Mittal, C., Mahony, S. & Pugh, B. F., Mar 2018, In : Genome research. 28, 3, p. 357-366 10 p.

Research output: Contribution to journalArticle

2016

Genome-wide nucleosome specificity and function of chromatin remodellers in ES cells

De Dieuleveult, M., Yen, K., Hmitou, I., Depaux, A., Boussouar, F., Dargham, D. B., Jounier, S., Humbertclaude, H., Ribierre, F., Baulard, C., Farrell, N. P., Park, B., Keime, C., Carrière, L., Berlivet, S., Gut, M., Gut, I., Werner, M., Deleuze, J. F., Olaso, R. & 4 others, Aude, J. C., Chantalat, S., Pugh, B. F. & Gérard, M., Feb 4 2016, In : Nature. 530, 7588, p. 113-116 4 p.

Research output: Contribution to journalArticle

Genome-wide organization of GATA1 and TAL1 determined at high resolution

Han, G. C., Vinayachandran, V., Bataille, A. R., Park, B., Chan-Salis, K. Y., Keller, C. A., Long, M., Mahony, S., Hardison, R. C. & Pugh, B. F., 2016, In : Molecular and cellular biology. 36, 1, p. 157-172 16 p.

Research output: Contribution to journalArticle

Genomic Nucleosome Organization Reconstituted with Pure Proteins

Krietenstein, N., Wal, M., Watanabe, S., Park, B., Peterson, C. L., Pugh, B. F. & Korber, P., Oct 20 2016, In : Cell. 167, 3, p. 709-721.e12

Research output: Contribution to journalArticle

2015

E3 SUMO ligase AtSIZ1 positively regulates SLY1-mediated GA signalling and plant development

Kim, S. I., Park, B. S., Kim, D. Y., Yeu, S. Y., Song, S. I., Song, J. T. & Seo, H. S., Jul 15 2015, In : Biochemical Journal. 469, 2, p. 299-314 16 p.

Research output: Contribution to journalArticle

2014

A Comprehensive and High-Resolution Genome-wide Response of p53 to Stress

Chang, G. S., Chen, X. A., Park, B., Rhee, H. S., Li, P., Han, K. H., Mishra, T., Chan-Salis, K. Y., Li, Y., Hardison, R. C., Wang, Y. & Pugh, B. F., Jul 24 2014, In : Cell Reports. 8, 2, p. 514-527 14 p.

Research output: Contribution to journalArticle

FLC-mediated flowering repression is positively regulated by sumoylation

Son, G. H., Park, B. S., Song, J. T. & Seo, H. S., Jan 27 2014, In : Journal of Experimental Botany. 65, 1, p. 339-351 13 p.

Research output: Contribution to journalArticle

2013

AtSIZ1 regulates expression of nitrite reductase but not its activity

Park, B. S., Kim, S. I. & Seo, H. S., Apr 19 2013, In : Journal of the Korean Society for Applied Biological Chemistry. 56, 2, p. 243-245 3 p.

Research output: Contribution to journalArticle

Phytophthora database 2.0: Update and future direction

Park, B., Martin, F., Geiser, D. M., Kim, H. S., Mansfield, M. A., Nikolaeva, E., Park, S. Y., Coffey, M. D., Russo, J., Kim, S. H., Balci, Y., Abad, G., Burgess, T., Grünwald, N. J., Cheong, K., Choi, J., Lee, Y. H. & Kang, S., Dec 2013, In : Phytopathology. 103, 12, p. 1204-1208 5 p.

Research output: Contribution to journalArticle

2012

Arabidopsis SIZ1 positively regulates alternative respiratory bypass pathways

Park, B. S., Kim, S. I., Song, J. T. & Seo, H. S., Jun 1 2012, In : BMB Reports. 45, 6, p. 342-347 6 p.

Research output: Contribution to journalArticle

Phylogenetic diversity of insecticolous fusaria inferred from multilocus DNA sequence data and their molecular identification via FUSARIUM-ID and Fusarium MLST

O'Donnell, K., Humber, R. A., Geiser, D. M., Kang, S., Park, B., Robert, V. A. R. G., Crous, P. W., Johnston, P. R., Aoki, T., Rooney, A. P. & Rehner, S. A., Mar 2012, In : Mycologia. 104, 2, p. 427-445 19 p.

Research output: Contribution to journalArticle

Protein Disulfide Isomerase-Like Protein 1-1 Controls Endosperm Development through Regulation of the Amount and Composition of Seed Proteins in Rice

Kim, Y. J., Yeu, S. Y., Park, B. S., Koh, H. J., Song, J. T. & Seo, H. S., Sep 6 2012, In : PloS one. 7, 9, e44493.

Research output: Contribution to journalArticle

Systematic and searchable classification of cytochrome P450 proteins encoded by fungal and oomycete genomes

Moktali, V., Park, J., Fedorova-Abrams, N. D., Park, B., Choi, J., Lee, Y. H. & Kang, S., Oct 4 2012, In : BMC genomics. 13, 1, 525.

Research output: Contribution to journalArticle

2011

Arabidopsis nitrate reductase activity is stimulated by the E3 SUMO ligase AtSIZ1

Park, B. S., Song, J. T. & Seo, H. S., Jul 26 2011, In : Nature communications. 2, 1, 400.

Research output: Contribution to journalArticle

Auxin is involved in the regulation of leaf and root development by LAF1 under short day conditions

Park, B. S., Sang, W. G., Song, J. T., Lee, B. H., Kim, J. H. & Seo, H. S., Dec 1 2011, In : Biologia Plantarum. 55, 4, p. 647-652 6 p.

Research output: Contribution to journalArticle

Cyber infrastructure for Fusarium: Three integrated platforms supporting strain identification, phylogenetics, comparative genomics and knowledge sharing

Park, B., Park, J., Cheong, K. C., Choi, J., Jung, K., Kim, D., Lee, Y. H., Ward, T. J., O'Donnell, K., Geiser, D. M. & Kang, S., Jan 2011, In : Nucleic acids research. 39, SUPPL. 1, p. D640-D646

Research output: Contribution to journalArticle

The development of a co-dominant marker for the β-conglycinin α′ subunit in soybeans

Kim, S. I., Kim, M. Y., Van, K., Lee, Y. H., Kim, H. S., Cai, C. M., Park, B. S., Seo, H. S. & Lee, S. H., Jan 1 2011, In : Euphytica. 177, 3, p. 355-363 9 p.

Research output: Contribution to journalArticle

2010

Internet-accessible DNA sequence database for identifying fusaria from human and animal infections

O'Donnell, K., Sutton, D. A., Rinaldi, M. G., Sarver, B. A. J., Balajee, S. A., Schroers, H. J., Summerbell, R. C., Robert, V. A. R. G., Crous, P. W., Zhang, N., Aoki, T., Jung, K., Park, J., Lee, Y. H., Kang, S., Park, B. & Geiser, D. M., Oct 2010, In : Journal of clinical microbiology. 48, 10, p. 3708-3718 11 p.

Research output: Contribution to journalArticle

SPL28 encodes a clathrin-associated adaptor protein complex 1, medium subunit μ1 (AP1M1) and is responsible for spotted leaf and early senescence in rice (Oryza sativa)

Qiao, Y., Jiang, W., Lee, J., Park, B., Choi, M. S., Piao, R., Woo, M. O., Roh, J. H., Han, L., Paek, N. C., Seo, H. S. & Koh, H. J., Jan 1 2010, In : New Phytologist. 185, 1, p. 258-274 17 p.

Research output: Contribution to journalArticle

Ubiquitination of LHY by SINAT5 regulates flowering time and is inhibited by DET1

Park, B. S., Eo, H. J., Jang, I. C., Kang, H. G., Song, J. T. & Seo Hak Soo, H. S., Jul 1 2010, In : Biochemical and Biophysical Research Communications. 398, 2, p. 242-246 5 p.

Research output: Contribution to journalArticle

2009

IMGD: An integrated platform supporting comparative genomics and phylogenetics of insect mitochondrial genomes

Lee, W., Park, J., Choi, J., Jung, K., Park, B., Kim, D., Lee, J., Ahn, K., Song, W., Kang, S., Lee, Y. H. & Lee, S., Apr 7 2009, In : BMC genomics. 10, 148.

Research output: Contribution to journalArticle

Proteomic analysis of the rice seed for quality improvement

Kim, Y. J., Choi, S. H., Park, B. S., Song, J. T., Kim, M. C., Koh, H. J. & Seo, H. S., Dec 1 2009, In : Plant Breeding. 128, 6, p. 541-550 10 p.

Research output: Contribution to journalArticle

The calmodulin-binding transcription factor OsCBT suppresses defense responses to pathogens in rice

Koo, S. C., Choi, M. S., Chun, H. J., Shin, D. B., Park, B. S., Kim, Y. H., Park, H. M., Seo, H. S., Song, J. T., Kang, K. Y., Yun, D. J., Chung, W. S., Cho, M. J. & Kim, M. C., Jun 12 2009, In : Molecules and cells. 27, 5, p. 563-570 8 p.

Research output: Contribution to journalArticle

2008

CFGP: A web-based, comparative fungal genomics platform

Park, J., Park, B., Jung, K., Jang, S., Yu, K., Choi, J., Kong, S., Park, J., Kim, S., Kim, H., Kim, S., Kim, J. F., Blair, J. E., Lee, K., Kang, S. & Lee, Y. H., Jan 2008, In : Nucleic acids research. 36, SUPPL. 1, p. D562-D571

Research output: Contribution to journalArticle

FTFD: An informatics pipeline supporting phylogenomic analysis of fungal transcription factors

Park, J., Park, J., Jang, S., Kim, S., Kong, S., Choi, J., Ahn, K., Kim, J., Lee, S., Kim, S., Park, B., Jung, K., Kim, S., Kang, S. & Lee, Y. H., Apr 1 2008, In : Bioinformatics. 24, 7, p. 1024-1025 2 p.

Research output: Contribution to journalArticle

Fungal cytochrome P450 database

Park, J., Lee, S., Choi, J., Ahn, K., Park, B., Park, J., Kang, S. & Lee, Y. H., Aug 28 2008, In : BMC genomics. 9, 402.

Research output: Contribution to journalArticle

Inactivation of the UGPase1 gene causes genic male sterility and endosperm chalkiness in rice (Oryza sativa L.)

Woo, M. O., Ham, T. H., Ji, H. S., Choi, M. S., Jiang, W., Chu, S. H., Piao, R., Chin, J. H., Kim, J. A., Park, B. S., Seo, H. S., Jwa, N. S., McCouch, S. & Koh, H. J., Apr 2008, In : Plant Journal. 54, 2, p. 190-204 15 p.

Research output: Contribution to journalArticle

Phytophthora database: A forensic database supporting the identification and monitoring of phytophthora

Park, J., Park, B., Veeraraghavan, N., Jung, K., Lee, Y. H., Blair, J. E., Geiser, D. M., Isard, S., Mansfield, M. A., Nikolaeva, E., Park, S. Y., Russo, J., Kim, S. H., Greene, M., Ivors, K. L., Balci, Y., Peiman, M., Erwin, D. C., Coffey, M. D., Rossman, A. & 9 others, Farr, D., Cline, E., Grünwald, N. J., Luster, D. G., Schrandt, J., Martin, F., Ribeiro, O. K., Makalowska, I. & Kang, S., Jun 1 2008, In : Plant Disease. 92, 6, p. 966-972 7 p.

Research output: Contribution to journalArticle

SNUGB: A versatile genome browser supporting comparative and functional fungal genomics

Jung, K., Park, J., Choi, J., Park, B., Kim, S., Ahn, K., Choi, J., Choi, D., Kang, S. & Lee, Y. H., Dec 4 2008, In : BMC genomics. 9, 586.

Research output: Contribution to journalArticle

2007

Genome-wide functional analysis of pathogenicity genes in the rice blast fungus

Jeon, J., Park, S. Y., Chi, M. H., Choi, J., Park, J., Rho, H-S., Kim, S., Goh, J., Yoo, S., Choi, J., Park, J. Y., Yi, M., Yang, S., Kwon, M. J., Han, S. S., Kim, B. R., Khang, C. H., Park, B., Lim, S. E., Jung, K. & 10 others, Kong, S., Karunakaran, M., Oh, H. S., Kim, H., Kim, S., Park, J., Kang, S., Choi, W. B., Kang, S. & Lee, Y. H., Apr 1 2007, In : Nature genetics. 39, 4, p. 561-565 5 p.

Research output: Contribution to journalArticle

Post-translational regulation of FLC is mediated by an E3 ubiquitin ligase activity of SINAT5 in Arabidopsis

Park, B. S., Sang, W. G., Yeu, S. Y., Choi, Y. D., Paek, N. C., Kim, M. C., Song, J. T. & Seo, H. S., Aug 1 2007, In : Plant Science. 173, 2, p. 269-275 7 p.

Research output: Contribution to journalArticle