Alexander Favorov

Research Associate

19992018
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Research Output 1999 2018

  • 91 Article
  • 2 Conference contribution
  • 1 Review article

Coloc-stats: A unified web interface to perform colocalization analysis of genomic features

Simovski, B., Kanduri, C., Gundersen, S., Titov, D., Domanska, D., Bock, C., Bossini-Castillo, L., Chikina, M., Favorov, A., Layer, R. M., Mironov, A. A., Quinlan, A. R., Sheffield, N. C., Trynka, G. & Sandve, G. K., Jul 2 2018, In : Nucleic Acids Research. 46, W1, p. W186-W193

Research output: Contribution to journalArticle

Genomics
Research Personnel
Research

Discovery and development of differentially methylated regions in human papillomavirus-related oropharyngeal squamous cell carcinoma

Ren, S., Gaykalova, D., Wang, J., Guo, T., Danilova, L. V., Favorov, A., Fertig, E., Bishop, J., Khan, Z., Flam, E., Wysocki, P. T., DeJong, P., Ando, M., Liu, C., Sakai, A., Fukusumi, T., Haft, S., Sadat, S. & Califano, J. A., Jan 1 2018, (Accepted/In press) In : International Journal of Cancer.

Research output: Contribution to journalArticle

Squamous Cell Carcinoma
Methylation
DNA Methylation
Genome
Atlases

Enter the Matrix: Factorization Uncovers Knowledge from Omics

Stein-O'Brien, G. L., Arora, R., Culhane, A. C., Favorov, A., Garmire, L. X., Greene, C. S., Goff, L., Li, Y., Ngom, A., Ochs, M. F., Xu, Y. & Fertig, E., Jan 1 2018, (Accepted/In press) In : Trends in Genetics.

Research output: Contribution to journalArticle

Epigenetic regulation of gene expression in cancer: Techniques, resources and analysis

Kagohara, L. T., Stein-O'Brien, G. L., Kelley, D., Flam, E., Wick, H. C., Danilova, L. V., Easwaran, H., Favorov, A., Qian, J., Gaykalova, D. & Fertig, E., Jan 1 2018, In : Briefings in Functional Genomics. 17, 1, p. 49-63 15 p.

Research output: Contribution to journalReview article

Gene Expression Regulation
Bioinformatics
Epigenomics
Gene expression
Throughput

Functional characterization of alternatively spliced GSN in head and neck squamous cell carcinoma

Kelley, D. Z., Flam, E. L., Guo, T., Danilova, L. V., Zamuner, F. T., Bohrson, C., Considine, M., Windsor, E. J., Bishop, J. A., Zhang, C., Koch, W. M., Sidransky, D., Westra, W. H., Chung, C. H., Califano, J. A., Wheelan, S., Favorov, A., Florea, L. D., Fertig, E. & Gaykalova, D., Jan 1 2018, (Accepted/In press) In : Translational Research.

Research output: Contribution to journalArticle

Alternative Splicing
Protein Isoforms
Tumors
Neoplasms
Cell proliferation