Whiting School of Engineering

Research Output

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Review article
2020

An Individualized, Data-Driven Digital Approach for Precision Behavior Change

Wongvibulsin, S., Martin, S. S., Saria, S., Zeger, S. L. & Murphy, S. A., May 1 2020, In : American Journal of Lifestyle Medicine. 14, 3, p. 289-293 5 p.

Research output: Contribution to journalReview article

Artificial intelligence to diagnose ischemic stroke and identify large vessel occlusions: A systematic review

Murray, N. M., Unberath, M., Hager, G. D. & Hui, F. K., Feb 1 2020, In : Journal of neurointerventional surgery. 12, 2, p. 156-164 9 p.

Research output: Contribution to journalReview article

Better together: Elements of successful scientific software development in a distributed collaborative community

RosettaCommons Consortium, May 1 2020, In : PLoS computational biology. 16, 5, e1007507.

Research output: Contribution to journalReview article

Open Access

Surgical data science: The new knowledge domain

Vedula, S. S. & Hager, G. D., Sep 1 2020, In : Innovative Surgical Sciences. 2, 3, p. 109-121 13 p.

Research output: Contribution to journalReview article

Open Access
2019

Dissecting cellular mechanics: Implications for aging, cancer, and immunity

Harris, M. J., Wirtz, D. & Wu, P. H., Sep 2019, In : Seminars in Cell and Developmental Biology. 93, p. 16-25 10 p.

Research output: Contribution to journalReview article

How the mechanobiome drives cell behavior, viewed through the lens of control theory

Kothari, P., Johnson, C., Sandone, C., Iglesias, P. A. & Robinson, D., Sep 2 2019, In : Journal of cell science. 132, 17

Research output: Contribution to journalReview article

Open Access

Ten robotics technologies of the year

Yang, G. Z., Full, R. J., Jacobstein, N., Fischer, P., Bellingham, J., Choset, H., Christensen, H., Dario, P., Nelson, B. J. & Taylor, R., Jan 16 2019, In : Science Robotics. 4, 26, p. 1-5 5 p., eaaw1826.

Research output: Contribution to journalReview article

The Mechanism of Membrane Permeabilization by Peptides: Still an Enigma

Wimley, W. C. & Hristova, K., Jan 1 2019, (Accepted/In press) In : Australian Journal of Chemistry.

Research output: Contribution to journalReview article

The RTK Interactome: Overview and Perspective on RTK Heterointeractions

Paul, M. D. & Hristova, K., May 8 2019, In : Chemical Reviews. 119, 9, p. 5881-5921 41 p.

Research output: Contribution to journalReview article

2018

The Biophysics of 3D Cell Migration

Wu, P. H., Gilkes, D. & Wirtz, D., May 20 2018, In : Annual Review of Biophysics. 47, p. 549-567 19 p.

Research output: Contribution to journalReview article

The grand challenges of science robotics

Yang, G. Z., Bellingham, J., Dupont, P. E., Fischer, P., Floridi, L., Full, R., Jacobstein, N., Kumar, V., McNutt, M., Merrifield, R., Nelson, B. J., Scassellati, B., Taddeo, M., Taylor, R. H., Veloso, M., Wang, Z. L. & Wood, R., Jan 31 2018, In : Science Robotics. 3, 14, eaar7650.

Research output: Contribution to journalReview article

2016

Engineered Models of Confined Cell Migration

Paul, C. D., Hung, W. C., Wirtz, D. & Konstantopoulos, K., Jul 11 2016, In : Annual Review of Biomedical Engineering. 18, p. 159-180 22 p.

Research output: Contribution to journalReview article

2015

The Mechanobiology of Aging

Phillip, J. M., Aifuwa, I., Walston, J. & Wirtz, D., Dec 7 2015, In : Annual Review of Biomedical Engineering. 17, p. 113-141 29 p.

Research output: Contribution to journalReview article

2014

Bioengineering paradigms for cell migration in confined microenvironments

Stroka, K. M., Gu, Z., Sun, S. X. & Konstantopoulos, K., Oct 2014, In : Current Opinion in Cell Biology. 30, 1, p. 41-50 10 p.

Research output: Contribution to journalReview article

Hypoxia and the extracellular matrix: Drivers of tumour metastasis

Gilkes, D. M., Semenza, G. L. & Wirtz, D., Jun 2014, In : Nature Reviews Cancer. 14, 6, p. 430-439 10 p.

Research output: Contribution to journalReview article

The physical basis of renal fibrosis: Effects of altered hydrodynamic forces on kidney homeostasis

Grabias, B. M. & Konstantopoulos, K., Mar 1 2014, In : American Journal of Physiology - Renal Physiology. 306, 5, p. F473-F485

Research output: Contribution to journalReview article

2013

Cardiovascular magnetic resonance: Deeper insights through bioengineering

Young, A. A. & Prince, J. L., Jul 1 2013, In : Annual Review of Biomedical Engineering. 15, p. 433-461 29 p.

Research output: Contribution to journalReview article

Fluid shear stress-induced osteoarthritis: Roles of cyclooxygenase-2 and its metabolic products in inducing the expression of proinflammatory cytokines and matrix metalloproteinases

Wang, P., Guan, P. P., Guo, C., Zhu, F., Konstantopoulos, K. & Wang, Z. Y., Dec 1 2013, In : FASEB Journal. 27, 12, p. 4664-4677 14 p.

Research output: Contribution to journalReview article

The multi-faceted role of the actin cap in cellular mechanosensation and mechanotransduction

Kim, D. H., Chambliss, A. B. & Wirtz, D., Jun 21 2013, In : Soft Matter. 9, 23, p. 5516-5523 8 p.

Research output: Contribution to journalReview article

2012

Biased excitable networks: How cells direct motion in response to gradients

Iglesias, P. A. & Devreotes, P. N., Apr 1 2012, In : Current Opinion in Cell Biology. 24, 2, p. 245-253 9 p.

Research output: Contribution to journalReview article

Bringing the physical sciences into your cell biology research

Robinson, D. N. & Iglesias, P. A., Nov 1 2012, In : Molecular biology of the cell. 23, 21, p. 4167-4170 4 p.

Research output: Contribution to journalReview article

Chemoattractant signaling in Dictyostelium: Adaptation and amplification

Iglesias, P. A., Feb 28 2012, In : Science signaling. 5, 213, pe8.

Research output: Contribution to journalReview article

Industrial methodology for process verification in research (IMPROVER): Toward systems biology verification

Meyer, P., Hoeng, J., Rice, J. J., Norel, R., Sprengel, J., Stolle, K., Bonk, T., Corthesy, S., Royyuru, A., Peitsch, M. C. & Stolovitzky, G., May 1 2012, In : Bioinformatics. 28, 9, p. 1193-1201 9 p., bts116.

Research output: Contribution to journalReview article

Magnetic resonance connectome automated pipeline: An overview

Gray, W. R., Bogovic, J. A., Vogelstein, J. T., Landman, B. A., Prince, J. L. & Vogelstein, R. J., Mar 1 2012, In : IEEE Pulse. 3, 2, p. 42-48 7 p., 6173097.

Research output: Contribution to journalReview article

Separation anxiety: Stress, tension and cytokinesis

Mohan, K., Iglesias, P. A. & Robinson, D. N., Jul 15 2012, In : Experimental cell research. 318, 12, p. 1428-1434 7 p.

Research output: Contribution to journalReview article

The role of sugars in dendritic cell trafficking

Silva, Z., Konstantopoulos, K. & Videira, P. A., Apr 1 2012, In : Annals of biomedical engineering. 40, 4, p. 777-789 13 p.

Research output: Contribution to journalReview article

Transmembrane helix dimerization: Beyond the search for sequence motifs

Li, E., Wimley, W. C. & Hristova, K., Feb 1 2012, In : Biochimica et Biophysica Acta - Biomembranes. 1818, 2, p. 183-193 11 p.

Research output: Contribution to journalReview article

2011

A look at arginine in membranes

Hristova, K. & Wimley, W. C., Jan 1 2011, In : Journal of Membrane Biology. 239, 1-2, p. 49-56 8 p.

Research output: Contribution to journalReview article

Biomechanics of leukocyte rolling

Sundd, P., Pospieszalska, M. K., Cheung, L. S. L., Konstantopoulos, K. & Ley, K., May 2 2011, In : Biorheology. 48, 1, p. 1-35 35 p.

Research output: Contribution to journalReview article

Integrative modeling of the cardiac ventricular myocyte

Winslow, R. L., Cortassa, S., O'Rourke, B., Hashambhoy, Y. L., Rice, J. J. & Greenstein, J. L., Jul 1 2011, In : Wiley Interdisciplinary Reviews: Systems Biology and Medicine. 3, 4, p. 392-413 22 p.

Research output: Contribution to journalReview article

Review of methods for objective surgical skill evaluation

Reiley, C. E., Lin, H. C., Yuh, D. D. & Hager, G. D., Feb 2011, In : Surgical endoscopy. 25, 2, p. 356-366 11 p.

Research output: Contribution to journalReview article

The physics of cancer: The role of physical interactions and mechanical forces in metastasis

Wirtz, D., Konstantopoulos, K. & Searson, P. C., Jul 1 2011, In : Nature Reviews Cancer. 11, 7, p. 512-522 11 p.

Research output: Contribution to journalReview article

2010

Receptor tyrosine kinase transmembrane domains: Function, dimer structure and dimerization energetics

Li, E. & Hristova, K., Jan 1 2010, In : Cell Adhesion and Migration. 4, 2, p. 249-254 6 p.

Research output: Contribution to journalReview article

Tackling the widespread and critical impact of batch effects in high-throughput data

Leek, J. T., Scharpf, R. B., Bravo, H. C., Simcha, D., Langmead, B., Johnson, W. E., Geman, D., Baggerly, K. & Irizarry, R. A., Oct 14 2010, In : Nature Reviews Genetics. 11, 10, p. 733-739 7 p.

Research output: Contribution to journalReview article

Tools for analyzing cell shape changes during chemotaxis

Xiong, Y. & Iglesias, P. A., Nov 1 2010, In : Integrative Biology. 2, 11-12, p. 561-567 7 p.

Research output: Contribution to journalReview article

2009

Cancer cells in transit: The vascular interactions of tumor cells

Konstantopoulos, K. & Thomas, S. N., Aug 1 2009, In : Annual Review of Biomedical Engineering. 11, p. 177-202 26 p.

Research output: Contribution to journalReview article

Computational modeling of cardiac disease: Potential for personalized medicine

Reumann, M., Gurev, V. & Rice, J. J., Jul 29 2009, In : Personalized Medicine. 6, 1, p. 45-66 22 p.

Research output: Contribution to journalReview article

Identification, characterization and utilization of tumor cell selectin ligands in the design of colon cancer diagnostics

Thomas, S. N., Tong, Z., Stebe, K. J. & Konstantopoulos, K., Aug 19 2009, In : Biorheology. 46, 3, p. 207-225 19 p.

Research output: Contribution to journalReview article

Micro- and macrorheology of mucus

Lai, S. K., Wang, Y. Y., Wirtz, D. & Hanes, J., Feb 27 2009, In : Advanced Drug Delivery Reviews. 61, 2, p. 86-100 15 p.

Research output: Contribution to journalReview article

Particle-tracking microrheology of living cells: Principles and applications

Wirtz, D., Nov 26 2009, In : Annual Review of Biophysics. 38, 1, p. 301-326 26 p.

Research output: Contribution to journalReview article

2008

Applications of Robotics for Laryngeal Surgery

Hillel, A. T., Kapoor, A., Simaan, N., Taylor, R. H. & Flint, P., Aug 1 2008, In : Otolaryngologic Clinics of North America. 41, 4, p. 781-791 11 p.

Research output: Contribution to journalReview article

Navigating through models of chemotaxis

Iglesias, P. A. & Devreotes, P. N., Feb 1 2008, In : Current Opinion in Cell Biology. 20, 1, p. 35-40 6 p.

Research output: Contribution to journalReview article

2007

A Mechanosensory System Controls Cell Shape Changes during Mitosis

Effler, J. C., Iglesias, P. A. & Robinson, D. N., Jan 1 2007, In : Cell Cycle. 6, 1, p. 30-35 6 p.

Research output: Contribution to journalReview article

Open Access

An integrative approach to understanding mechanosensation

Poirier, C. C. & Iglesias, P. A., Jul 1 2007, In : Briefings in bioinformatics. 8, 4, p. 258-265 8 p.

Research output: Contribution to journalReview article

A perspective on microarrays: Current applications, pitfalls, and potential uses

Jaluria, P., Konstantopoulos, K., Betenbaugh, M. & Shiloach, J., Mar 1 2007, In : Microbial Cell Factories. 6, 4.

Research output: Contribution to journalReview article

Mathematical modeling of cell adhesion in shear flow: Application to targeted drug delivery in inflammation and cancer metastasis

Jadhav, S., Eggleton, C. D. & Konstantopoulos, K., May 1 2007, In : Current pharmaceutical design. 13, 15, p. 1511-1526 16 p.

Research output: Contribution to journalReview article

2006

A perspective on medical robotics

Taylor, R. H., Sep 2006, In : Proceedings of the IEEE. 94, 9, p. 1652-1664 13 p.

Research output: Contribution to journalReview article

High-resolution protein-protein docking

Gray, J. J., Apr 1 2006, In : Current Opinion in Structural Biology. 16, 2, p. 183-193 11 p.

Research output: Contribution to journalReview article

Role of receptor tyrosine kinase transmembrane domains in cell signaling and human pathologies

Li, E. & Hristova, K., May 23 2006, In : Biochemistry. 45, 20, p. 6241-6251 11 p.

Research output: Contribution to journalReview article