Whiting School of Engineering

Research Output

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2017

Reproducible RNA-seq analysis using recount2

Collado-Torres, L., Nellore, A., Kammers, K., Ellis, S. E., Taub, M. A., Hansen, K. D., Jaffe, A., Langmead, B. & Leek, J. T., Apr 11 2017, In : Nature Biotechnology. 35, 4, p. 319-321 3 p.

Research output: Contribution to journalLetter

2015

Ballgown bridges the gap between transcriptome assembly and expression analysis

Frazee, A. C., Pertea, G., Jaffe, A. E., Langmead, B., Salzberg, S. L. & Leek, J. T., Feb 2015, In : Nature biotechnology. 33, 3, p. 243-246 4 p.

Research output: Contribution to journalLetter

2013

Towards real-time simulation of cardiac electrophysiology in a human heart at high resolution

Richards, D. F., Glosli, J. N., Draeger, E. W., Mirin, A. A., Chan, B., Fattebert, J. L., Krauss, W. D., Oppelstrup, T., Butler, C. J., Gunnels, J. A., Gurev, V., Kim, C., Magerlein, J., Reumann, M., Wen, H. F. & Rice, J. J., Jul 2013, In : Computer Methods in Biomechanics and Biomedical Engineering. 16, 7, p. 802-805 4 p.

Research output: Contribution to journalLetter

2011

Comment on: A planning quality evaluation tool for prostate adaptive IMRT based on machine learning Med. Phys. 38, 719 (2011)

Kazhdan, M., McNutt, T., Taylor, R., Wu, B. & Simari, P., May 2011, In : Medical physics. 38, 5, 1 p.

Research output: Contribution to journalLetter

Reply: Reducing background fluorescence reveals adhesions in 3D matrices

Fraley, S. I., Feng, Y., Wirtz, D. & Longmore, G. D., Jan 1 2011, In : Nature cell biology. 13, 1, p. 5-7 3 p.

Research output: Contribution to journalLetter

The self-assessment trap: Can we all be better than average?

Norel, R., Rice, J. J. & Stolovitzky, G., Oct 19 2011, In : Molecular systems biology. 7, 537.

Research output: Contribution to journalLetter

2010

Diffusion tensor imaging reveals disease-specific deep cerebellar nuclear changes in cerebellar degeneration

Du, A. X., Cuzzocreo, J. L., Landman, B. A., Zee, D. S., Prince, J. L. & Ying, S. H., Aug 1 2010, In : Journal of neurology. 257, 8, p. 1406-1408 3 p.

Research output: Contribution to journalLetter