Whiting School of Engineering

Research Output

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Conference contribution
2008

Localization of pelvic anatomical coordinate system using US/atlas registration for total hip replacement

Foroughi, P., Song, D., Chintalapani, G., Taylor, R. H. & Fichtinger, G., Dec 1 2008, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2008 - 11th International Conference, Proceedings. PART 2 ed. p. 871-879 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5242 LNCS, no. PART 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Medical robotics and computer-integrated surgery

Taylor, R. H., Sep 23 2008, Proceedings - 32nd Annual IEEE International Computer Software and Applications Conference, COMPSAC 2008. 1 p. 4591515. (Proceedings - International Computer Software and Applications Conference).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Prostate brachytherapy seed localization with Gaussian blurring and camera self-calibration

Lee, J., Liu, X., Prince, J. L. & Fichtinger, G., Dec 1 2008, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2008 - 11th International Conference, Proceedings. PART 2 ed. p. 636-643 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5242 LNCS, no. PART 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Robust maximum likelihood estimation in Q-space MRI

Landman, B. A., Farrell, J. A. D., Smith, S. A., Calabresi, P. A., Van Zijl, P. C. M. & Prince, J. L., 2008, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI. p. 867-870 4 p. 4541134. (2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Robust motion estimation and structure recovery from endoscopic image sequences with an adaptive scale Kernel Consensus estimator

Wang, H., Mirota, D., Ishii, M. & Hager, G. D., Sep 26 2008, 26th IEEE Conference on Computer Vision and Pattern Recognition, CVPR. 4587687. (26th IEEE Conference on Computer Vision and Pattern Recognition, CVPR).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Selective control of mucus mesh size and nanorheology for prevention of infectious diseases

Lai, S. K., Wang, Y. Y., Hida, K., Cone, R., Wirtz, D. & Hanes, J., Dec 1 2008, AIChE100 - 2008 AIChE Annual Meeting, Conference Proceedings. (AIChE Annual Meeting, Conference Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Spatially-compressed cardiac myofilament models generate hysteresis that is not found in real muscle

Rice, J. J., Tu, Y., Poggesi, C. & De Tombe, P. P., Dec 1 2008, Pacific Symposium on Biocomputing 2008, PSB 2008. p. 366-377 12 p. (Pacific Symposium on Biocomputing 2008, PSB 2008).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Tomosynthesis-based radioactive seed localization in prostate brachytherapy using modified distance map images

Lee, J., Liu, X., Jain, A. K., Prince, J. L. & Fichtinger, G., Sep 10 2008, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI. p. 680-683 4 p. 4541087. (2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Proceedings, ISBI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Towards "real-time" tool-tissue interaction detection in robotically assisted laparoscopy

Voros, S. & Hager, G. D., Dec 1 2008, Proceedings of the 2nd Biennial IEEE/RAS-EMBS International Conference on Biomedical Robotics and Biomechatronics, BioRob 2008. p. 562-567 6 p. 4762915. (Proceedings of the 2nd Biennial IEEE/RAS-EMBS International Conference on Biomedical Robotics and Biomechatronics, BioRob 2008).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2007

A joint registration and segmentation approach to skull stripping

Carass, A., Wheeler, M. B., Cuzzocreo, J., Bazin, P. L., Bassett, S. S. & Prince, J. L., Nov 27 2007, 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings. p. 656-659 4 p. 4193371. (2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A nonparametric treatment for location/segmentation based visual tracking

Lu, L. & Hager, G. D., Oct 11 2007, 2007 IEEE Computer Society Conference on Computer Vision and Pattern Recognition, CVPR'07. 4270001. (Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Beam steering approach for speckle characterization and out-of-plane motion estimation in real tissue

Rivaz, H., Zellars, R., Hager, G., Fichtinger, G. & Boctor, E., Dec 1 2007, 2007 IEEE Ultrasonics Symposium Proceedings, IUS. p. 781-784 4 p. 4409773. (Proceedings - IEEE Ultrasonics Symposium).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

C-arm distortion correction using patient CT as a fiducial

Chintalapani, G. & Taylor, R. H., Nov 27 2007, 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings. p. 1180-1183 4 p. 4193502. (2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Control engineering and systems biology

Andrews, B. W. & Iglesias, P. A., Oct 30 2007, Mathematical Methods for Robust and Nonlinear Control: EPSRC Summer School. Turner, M. C. & Bates, D. G. (eds.). p. 267-288 22 p. (Lecture Notes in Control and Information Sciences; vol. 367).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Coping with noise in E. coli chemotaxis

Andrews, B. W., Iglesias, P. A. & Yi, T. M., Dec 1 2007, Forty-first Annual Conference on Information Sciences and Systems, CISS 2007 - Proceedings. p. 442-443 2 p. 4298345. (Forty-first Annual Conference on Information Sciences and Systems, CISS 2007 - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Deformable 2D-3D registration of the pelvis with a limited field of view, using shape statistics

Sadowsky, O., Chintalapani, G. & Taylor, R. H., 2007, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007 - 10th International Conference, Proceedings. PART 2 ed. Springer Verlag, p. 519-526 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4792 LNCS, no. PART 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access

Deformable Motion Tracking of Cardiac Structures (DEMOTRACS) for improved MR imaging

Dewan, M., Lorenz, C. H. & Hager, G. D., Oct 12 2007, 2007 IEEE Computer Society Conference on Computer Vision and Pattern Recognition, CVPR'07. 4270167. (Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Dynamic foreground/background extraction from images and videos using random patches

Lu, L. & Hager, G., Dec 1 2007, Advances in Neural Information Processing Systems 19 - Proceedings of the 2006 Conference. p. 929-936 8 p. (Advances in Neural Information Processing Systems).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Dynamic guidance with pseudoadmittance virtual fixtures

Pezzementi, Z., Okamura, A. M. & Hager, G. D., Nov 27 2007, 2007 IEEE International Conference on Robotics and Automation, ICRA'07. p. 1761-1767 7 p. 4209341. (Proceedings - IEEE International Conference on Robotics and Automation).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Fast motion imaging using reduced field of view partial fourier MRI

Agarwal, H. K., Abd-Elmoniem, K. Z. & Prince, J. L., 2007, 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings. p. 620-623 4 p. 4193362. (2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Full motion tracking in ultrasound using image speckle information and visual servoing

Krupa, A., Fichtinger, G. & Hager, G. D., Nov 27 2007, 2007 IEEE International Conference on Robotics and Automation, ICRA'07. p. 2458-2464 7 p. 4209452. (Proceedings - IEEE International Conference on Robotics and Automation).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

HARP tracking refinement using seeded region growing

Liu, X., Murano, E., Stone, M. & Prince, J. L., Nov 27 2007, 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings. p. 372-375 4 p. 4193300. (2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Kernel-based visual servoing

Kallem, V., Dewan, M., Swensen, J. P., Hager, G. D. & Cowan, N. J., Dec 1 2007, Proceedings of the 2007 IEEE/RSJ International Conference on Intelligent Robots and Systems, IROS 2007. p. 1975-1980 6 p. 4399546. (IEEE International Conference on Intelligent Robots and Systems).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Multi-slice three-dimensional myocardial strain tensor quantification using zHARP

Abd-Elmoniem, K. Z., Stuber, M. & Prince, J. L., Dec 1 2007, Information Processing in Medical lmaging - 20th International Conference, IPMI 2007, Proceedings. p. 62-73 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4584 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

New approaches to calibration and segmentation in interventional ultrasound

Fichtinger, G., Boctor, E. M. & Hager, G. D., Nov 27 2007, 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings. p. 1060-1063 4 p. 4193472. (2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Octree grid topology preserving geometric deformable model for three-dimensional medical image segmentation

Bai, Y., Han, X. & Prince, J. L., 2007, Information Processing in Medical lmaging - 20th International Conference, IPMI 2007, Proceedings. Springer Verlag, p. 556-568 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4584 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Rate distortion theory in cellular signaling

Andrews, B. W. & Iglesias, P. A., Dec 1 2007, Forty-first Annual Conference on Information Sciences and Systems, CISS 2007 - Proceedings. p. 172-173 2 p. 4298294. (Forty-first Annual Conference on Information Sciences and Systems, CISS 2007 - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Real-time tissue tracking with b-mode ultrasound using speckle and visual servoing

Krupa, A., Fichtinger, G. & Hager, G. D., Dec 1 2007, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007 - 10th International Conference, Proceedings. PART 2 ed. p. 1-8 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4792 LNCS, no. PART 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Small animal radiation research platform: Imaging, mechanics, control and calibration

Matinfar, M., Gray, O., Iordachita, I., Kennedy, C., Ford, E., Wong, J., Taylor, R. H. & Kazanzides, P., Jan 1 2007, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007 - 10th International Conference, Proceedings. PART 2 ed. Springer Verlag, p. 926-934 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4792 LNCS, no. PART 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access

Statistical atlases of bone anatomy: Construction, iterative improvement and validation

Chintalapani, G., Ellingsen, L. M., Sadowsky, O., Prince, J. L. & Taylor, R. H., Jan 1 2007, Medical Image Computing and Computer-Assisted Intervention - 10th International Conference, Proceedings. PART 1 ed. Springer Verlag, p. 499-506 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4791 LNCS, no. PART 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access

Statistical characterization of C-arm distortion with application to intra-operative distortion correction

Chintalapani, G., Jain, A. K. & Taylor, R. H., Oct 15 2007, Medical Imaging 2007: Visualization and Image-Guided Procedures. PART 2 ed. 65092Y. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6509, no. PART 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Systems biology and control - A tutorial

Iglesias, P. A., Khammash, M., Munsky, B., Sontag, E. D. & Del Vecchio, D., Dec 1 2007, Proceedings of the 46th IEEE Conference on Decision and Control 2007, CDC. p. 1-12 12 p. 4435054. (Proceedings of the IEEE Conference on Decision and Control).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Topology-preserving geometric deformable model on adaptive quadtree grid

Bai, Y., Han, X. & Prince, J. L., Oct 12 2007, 2007 IEEE Computer Society Conference on Computer Vision and Pattern Recognition, CVPR'07. 4270333. (Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Toward optimal matching for 3D reconstruction of brachytherapy seeds

Labat, C., Jain, A., Fichtinger, G. & Prince, J., Jan 1 2007, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2007 - 10th International Conference, Proceedings. PART 2 ed. Springer Verlag, p. 701-709 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4792 LNCS, no. PART 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access

Ultrasound bone segmentation using dynamic programming

Foroughi, P., Boctor, E., Swartz, M. J., Taylor, R. H. & Fichtinger, G., Dec 1 2007, 2007 IEEE Ultrasonics Symposium Proceedings, IUS. p. 2523-2526 4 p. 4410208. (Proceedings - IEEE Ultrasonics Symposium).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2006

Artifact reduction in HARP strain maps using anisotropic smoothing

Abd-Elmoniem, K. Z., Parthasarathy, V. & Prince, J. L., Jun 30 2006, Medical Imaging 2006: Physiology, Function, and Structure from Medical Images. 61432P. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6143 II).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A spatially-detailed model of actin and myosin interaction in the cardiac myofilament including strain-based rates and cooperative mechanisms

Hussan, J. R., De Tombe, P. P. & Rice, J. J., Dec 1 2006, Proceedings of the Fourth IASTED International Conference on Biomedical Engineering. p. 124-132 9 p. (Proceedings of the Fourth IASTED International Conference on Biomedical Engineering; vol. 2006).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Atlas-assisted tomography: Registration of a deformable atlas to compensate for limited-angle cone-beam trajectory

Sadowsky, O., Ramamurthi, K., Ellingsen, L. M., Chintalapani, G., Prince, J. L. & Taylor, R. H., Nov 17 2006, 2006 3rd IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings. p. 1244-1247 4 p. 1625150. (2006 3rd IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings; vol. 2006).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Automatic estimation of midsagittal plane and AC-PC alignment based on nonrigid registration

Anbazhagan, P., Carass, A., Bazin, P. L. & Prince, J. L., Nov 17 2006, 2006 3rd IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings. p. 828-831 4 p. 162546. (2006 3rd IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings; vol. 2006).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Bootstrapped ultrasound calibration

Boctor, E. M., Iordachita, I., Choti, M. A., Hager, G. & Fichtinger, G., Jan 1 2006, Medicine Meets Virtual Reality 14 - Accelerating Change in Healthcare: Next Medical Toolkit, MMVR 2006. IOS Press, p. 61-66 6 p. (Studies in Health Technology and Informatics; vol. 119).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Constrained control for surgical assistant robots

Kapoor, A., Li, M. & Taylor, R. H., Dec 27 2006, Proceedings 2006 IEEE International Conference on Robotics and Automation, ICRA 2006. p. 231-236 6 p. 1641189. (Proceedings - IEEE International Conference on Robotics and Automation; vol. 2006).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

CT fluoroscopy-guided robotically-assisted lung biopsy

Xu, S., Fichtinger, G., Taylor, R. H., Banovac, F. & Cleary, K., Jun 30 2006, Medical Imaging 2006: Visualization, Image-Guided Procedures, and Display. 61411L. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6141).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Deformable registration of CT pelvis images using Mjolnir

Ellingsen, L. M. & Prince, J. L., Jan 1 2006, Proceedings of the 7th Nordic Signal Processing Symposium, NORSIG 2006. IEEE Computer Society, p. 46-49 4 p. 4052268. (Proceedings of the 7th Nordic Signal Processing Symposium, NORSIG 2006).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Effect of hand dynamics on virtual fixtures for compliant human-machine interfaces

Marayong, P., Hager, G. D. & Okamura, A. M., Oct 24 2006, IEEE Virtual Reality, Haptics Symposium and Symposium on 3D User Interface, 2006. 1 p. 1624124. (Proceedings - IEEE Virtual Reality; vol. 2006).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Effect of hand dynamics on virtual fixtures for compliant human-machine interfaces

Marayong, P., Hager, G. D. & Okamura, A. M., Nov 17 2006, 14th Symposium onHaptics Interfaces for Virtual Environment andTeleoperator Systems 2006 - Proceedings. p. 109-115 7 p. 1627075. (14th Symposium onHaptics Interfaces for Virtual Environment andTeleoperator Systems 2006 - Proceedings; vol. 2006).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Elasticity and echogenicity analysis of agarose phantoms mimicking liver tumors

Bin, L., Ronghua, Y., Peng, Y., Awad, M., Choti, M. & Taylor, R., Nov 22 2006, Proceedings of the IEEE 32nd Annual Northeast Bioengineering Conference, 2006. p. 81-82 2 p. 1629762. (Bioengineering, Proceedings of the Northeast Conference; vol. 2006).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Human-machine collaborative systems: Intelligent virtual fixtures and space applications

Hager, G. D., Okamura, A. M. & Taylor, R. H., Aug 21 2006, To Boldly Go Where No Human-Robot Team Has Gone Before - Papers from the AAAI Spring Symposium, Technical Report. p. 76-78 3 p. (AAAI Spring Symposium - Technical Report; vol. SS-06-07).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Ischemia and force sensing surgical instruments for augmenting available surgeon information

Fischer, G. S., Akinbiyi, T., Saha, S., Zand, J., Talamini, M., Marohn, M. & Taylor, R., Dec 22 2006, Proceedings of the First IEEE/RAS-EMBS International Conference on Biomedical Robotics and Biomechatronics, 2006, BioRob 2006. p. 1030-1035 6 p. 1639227. (Proceedings of the First IEEE/RAS-EMBS International Conference on Biomedical Robotics and Biomechatronics, 2006, BioRob 2006; vol. 2006).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Mjolnir: Deformable image registration using feature diffusion

Ellingsen, L. M. & Prince, J. L., Jun 22 2006, Medical Imaging 2006: Image Processing. 614410. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 6144 I).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

MRI image overlay: Applications to arthrography needle insertion

Fischer, G. S., Deguet, A., Schlattman, D., Taylor, R., Fayad, L., Zinreich, S. J. & Fichtinger, G., Jan 1 2006, Medicine Meets Virtual Reality 14 - Accelerating Change in Healthcare: Next Medical Toolkit, MMVR 2006. IOS Press, p. 150-155 6 p. (Studies in Health Technology and Informatics; vol. 119).

Research output: Chapter in Book/Report/Conference proceedingConference contribution