Whiting School of Engineering

Research Output

Filter
Conference contribution
2016

Automatic segmentation and statistical shape modeling of the paranasal sinuses to estimate natural variations

Sinha, A., Leonard, S., Reiter, A., Ishii, M., Taylor, R. H. & Hager, G., 2016, Medical Imaging 2016: Image Processing. SPIE, Vol. 9784. 97840D

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Autonomous on-board Near Earth Object detection

Rajan, P., Burlina, P., Chen, M., Edell, D., Jedynak, B., Mehta, N., Sinha, A. & Hager, G., Mar 30 2016, 2015 IEEE Applied Imagery Pattern Recognition Workshop, AIPR 2015. Institute of Electrical and Electronics Engineers Inc., 7444551. (2015 IEEE Applied Imagery Pattern Recognition Workshop, AIPR 2015).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Catheter tracking in an interventional photoacoustic surgical system

Cheng, A., Kim, Y., Zhang, H. K., Taylor, R. H. & Boctor, E., Dec 16 2016, 2016 Conference on Lasers and Electro-Optics, CLEO 2016. Institute of Electrical and Electronics Engineers Inc., 7787359

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Combined registration and motion correction of longitudinal retinal OCT data

Lang, A., Carass, A., Al-Louzi, O., Bhargava, P., Solomon, S., Calabresi, P. & Prince, J. L., 2016, Medical Imaging 2016: Image Processing. SPIE, Vol. 9784. 97840X

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Combining multi-atlas segmentation with brain surface estimation

Huo, Y., Carass, A., Resnick, S. M., Pham, D. L., Prince, J. L. & Landman, B. A., 2016, Medical Imaging 2016: Image Processing. Styner, M. A., Angelini, E. D. & Angelini, E. D. (eds.). SPIE, 97840E. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 9784).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Concurrent nonparametric estimation of organ geometry and tissue stiffness using continuous adaptive palpation

Chalasani, P., Wang, L., Roy, R., Simaan, N., Taylor, R. H. & Kobilarov, M., Jun 8 2016, 2016 IEEE International Conference on Robotics and Automation, ICRA 2016. Institute of Electrical and Electronics Engineers Inc., Vol. 2016-June. p. 4164-4171 8 p. 7487609

Research output: Chapter in Book/Report/Conference proceedingConference contribution

CT and MRI fusion for postimplant prostate brachytherapy evaluation

Dehghan, E., Le, Y., Lee, J., Song, D. Y., Fichtinger, G. & Prince, J. L., Jun 15 2016, 2016 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2016 - Proceedings. IEEE Computer Society, Vol. 2016-June. p. 625-628 4 p. 7493345

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Development of a snake-like dexterous manipulator for skull base surgery

Coemert, S., Gao, A., Carey, J. P., Traeger, M. F., Taylor, R. H., Lueth, T. C. & Armand, M., Oct 13 2016, 2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2016. Institute of Electrical and Electronics Engineers Inc., Vol. 2016-October. p. 5087-5090 4 p. 7591871

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Do what I want, not what I did: Imitation of skills by planning sequences of actions

Paxton, C., Jonathan, F., Kobilarov, M. & Hager, G., Nov 28 2016, IROS 2016 - 2016 IEEE/RSJ International Conference on Intelligent Robots and Systems. Institute of Electrical and Electronics Engineers Inc., Vol. 2016-November. p. 3778-3785 8 p. 7759556

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Effects of spatial resolution on image registration

Zhao, C., Carass, A., Jog, A. & Prince, J. L., 2016, Medical Imaging 2016: Image Processing. SPIE, Vol. 9784. 97840Y

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Endoscopic-CT: Learning-based photometric reconstruction for endoscopic sinus surgery

Reiter, A., Leonard, S., Sinha, A., Ishii, M., Taylor, R. H. & Hager, G., 2016, Medical Imaging 2016: Image Processing. SPIE, Vol. 9784. 978418

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Estimation of fiber orientations using neighborhood information

Ye, C., Zhuo, J., Gullapalli, R. P. & Prince, J. L., 2016, Computational Diffusion MRI - MICCAI Workshop, 2015. Springer Heidelberg, Vol. none. p. 87-96 10 p. (Mathematics and Visualization; vol. none).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Hierarchical semantic parsing for object pose estimation in densely cluttered scenes

Li, C., Bohren, J., Carlson, E. & Hager, G. D., Jun 8 2016, 2016 IEEE International Conference on Robotics and Automation, ICRA 2016. Institute of Electrical and Electronics Engineers Inc., p. 5068-5075 8 p. 7487712. (Proceedings - IEEE International Conference on Robotics and Automation; vol. 2016-June).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Image-based navigation for functional endoscopic sinus surgery using structure from motion

Leonard, S., Reiter, A., Sinha, A., Ishii, M., Taylor, R. H. & Hager, G., 2016, Medical Imaging 2016: Image Processing. SPIE, Vol. 9784. 97840V

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Improving cerebellar segmentation with statistical fusion

Plassard, A. J., Yang, Z., Prince, J. L., Claassen, D. O. & Landman, B. A., 2016, Medical Imaging 2016: Image Processing. SPIE, Vol. 9784. 97842R

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Incremental scene understanding on dense SLAM

Li, C., Xiao, H., Tateno, K., Tombari, F., Navab, N. & Hager, G. D., Nov 28 2016, IROS 2016 - 2016 IEEE/RSJ International Conference on Intelligent Robots and Systems. Institute of Electrical and Electronics Engineers Inc., p. 574-581 8 p. 7759111. (IEEE International Conference on Intelligent Robots and Systems; vol. 2016-November).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Intensity inhomogeneity correction of macular OCT using N3 and retinal flatspace

Lang, A., Carass, A., Jedynak, B. M., Solomon, S., Calabresi, P. & Prince, J. L., Jun 15 2016, 2016 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2016 - Proceedings. IEEE Computer Society, Vol. 2016-June. p. 197-200 4 p. 7493243

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Landmark based shape analysis for cerebellar ataxia classification and cerebellar atrophy pattern visualization

Yang, Z., Abulnaga, S. M., Carass, A., Kansal, K., Jedynak, B. M., Onyike, C. U., Ying, S. H. & Prince, J. L., 2016, Medical Imaging 2016: Image Processing. SPIE, Vol. 9784. 97840P

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Learning convolutional action primitives for fine-grained action recognition

Lea, C., Vidal, R. & Hager, G., Jun 8 2016, 2016 IEEE International Conference on Robotics and Automation, ICRA 2016. Institute of Electrical and Electronics Engineers Inc., Vol. 2016-June. p. 1642-1649 8 p. 7487305

Research output: Chapter in Book/Report/Conference proceedingConference contribution

MIND Demons for MR-to-CT deformable image registration in image-guided spine surgery

Reaungamornrat, S., De Silva, T., Uneri, A., Wolinsky, J. P., Khanna, A. J., Kleinszig, G., Vogt, S., Prince, J. L. & Siewerdsen, J. H., Jan 1 2016, Medical Imaging 2016: Image-Guided Procedures, Robotic Interventions, and Modeling. Webster, R. J. & Yaniv, Z. R. (eds.). SPIE, 97860H. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 9786).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Process monitoring in the intensive care unit: Assessing patient mobility through activity analysis with a non-invasive mobility sensor

Reiter, A., Ma, A., Rawat, N., Shrock, C. & Saria, S., 2016, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016 - 19th International Conference, Proceedings. Springer Verlag, Vol. 9900 LNCS. p. 482-490 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9900 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Progress toward robotic surgery of the lateral skull base: Integration of a dexterous continuum manipulator and flexible ring curette

Gao, A., Carey, J. P., Murphy, R. J., Iordachita, I., Taylor, R. H. & Armand, M., Jun 8 2016, 2016 IEEE International Conference on Robotics and Automation, ICRA 2016. Institute of Electrical and Electronics Engineers Inc., p. 4429-4435 7 p. 7487642. (Proceedings - IEEE International Conference on Robotics and Automation; vol. 2016-June).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Quality assurance using outlier detection on an automatic segmentation method for the cerebellar peduncles

Li, K., Ye, C., Yang, Z., Carass, A., Ying, S. H. & Prince, J. L., 2016, Medical Imaging 2016: Image Processing. SPIE, Vol. 9784. 97841H

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Recognizing surgical activities with recurrent neural networks

Dipietro, R., Lea, C., Malpani, A., Ahmidi, N., Vedula, S. S., Lee, G. I., Lee, M. R. & Hager, G., 2016, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016 - 19th International Conference, Proceedings. Springer Verlag, Vol. 9900 LNCS. p. 551-558 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9900 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Robot-assisted retinal vein cannulation with force-based puncture detection: Micron vs. the steady-hand eye robot

Gonenc, B., Tran, N., Gehlbach, P., Taylor, R. H. & Iordachita, I., Oct 13 2016, 2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2016. Institute of Electrical and Electronics Engineers Inc., Vol. 2016-October. p. 5107-5111 5 p. 7591876

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Segmental spatiotemporal CNNs for fine-grained action segmentation

Lea, C., Reiter, A., Vidal, R. & Hager, G. D., Jan 1 2016, Computer Vision - 14th European Conference, ECCV 2016, Proceedings. Matas, J., Sebe, N., Welling, M. & Leibe, B. (eds.). Springer Verlag, p. 36-52 17 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9907 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Segmentation and labeling of the ventricular system in normal pressure hydrocephalus using patch-based tissue classification and multi-atlas labeling

Ellingsen, L. M., Roy, S., Carass, A., Blitz, A. M., Pham, D. L. & Prince, J. L., 2016, Medical Imaging 2016: Image Processing. SPIE, Vol. 9784. 97840G

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Segmentation of thalamus from MR images via task-driven dictionary learning

Liu, L., Glaister, J., Sun, X., Carass, A., Tran, T. D. & Prince, J. L., 2016, Medical Imaging 2016: Image Processing. SPIE, Vol. 9784. 97843H

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Semi-autonomous telerobotic assembly over high-latency networks

Bohren, J., Paxton, C., Howarth, R., Hager, G. & Whitcomb, L. L., Apr 12 2016, ACM/IEEE International Conference on Human-Robot Interaction. IEEE Computer Society, Vol. 2016-April. p. 149-156 8 p. 7451746

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Sensor substitution for video-based action recognition

Rupprecht, C., Lea, C., Tombari, F., Navab, N. & Hager, G., Nov 28 2016, IROS 2016 - 2016 IEEE/RSJ International Conference on Intelligent Robots and Systems. Institute of Electrical and Electronics Engineers Inc., Vol. 2016-November. p. 5230-5237 8 p. 7759769

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Simultaneous segmentation of retinal surfaces and microcystic macular edema in SDOCT volumes

Antony, B. J., Lang, A., Swingle, E. K., Al-Louzi, O., Carass, A., Solomon, S., Calabresi, P., Saidha, S. & Prince, J. L., 2016, Medical Imaging 2016: Image Processing. SPIE, Vol. 9784. 97841C

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Surgical fiducial segmentation and tracking for pose estimation based on ultrasound B-mode images

Chen, L., Kuo, N., Aalamifar, F., Narrow, D., O'Brien-Coon, D., Prince, J. L. & Boctor, E., Oct 13 2016, 2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2016. Institute of Electrical and Electronics Engineers Inc., Vol. 2016-October. p. 1244-1247 4 p. 7590931

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Temporal convolutional networks: A unified approach to action segmentation

Lea, C., Vidal, R., Reiter, A. & Hager, G., 2016, Computer Vision – ECCV 2016 Workshops, Proceedings. Springer Verlag, Vol. 9915 LNCS. p. 47-54 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9915 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Thalamus parcellation using multi-modal feature classification and thalamic nuclei priors

Glaister, J., Carass, A., Stough, J. V., Calabresi, P. & Prince, J. L., 2016, Medical Imaging 2016: Image Processing. SPIE, Vol. 9784. 97843J

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Ultrasound to video registration using a bi-plane transrectal probe with photoacoustic markers

Cheng, A., Kang, H. J., Zhang, H. K., Kang, J. U., Taylor, R. H. & Boctor, E., 2016, Medical Imaging 2016: Image-Guided Procedures, Robotic Interventions, and Modeling. SPIE, Vol. 9786. 97860J

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Unsupervised surgical data alignment with application to automatic activity annotation

Gao, Y., Vedula, S. S., Lee, G. I., Lee, M. R., Khudanpur, S. & Hager, G., Jun 8 2016, 2016 IEEE International Conference on Robotics and Automation, ICRA 2016. Institute of Electrical and Electronics Engineers Inc., Vol. 2016-June. p. 4158-4163 6 p. 7487608

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Updating virtual fixtures from exploration data in force-controlled model-based telemanipulation

Wang, L., Chen, Z., Chalasani, P., Pile, J., Kazanzides, P., Taylor, R. H. & Simaan, N., 2016, 40th Mechanisms and Robotics Conference. American Society of Mechanical Engineers (ASME), Vol. 5A-2016.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Virtual fixture assistance for needle passing and knot tying

Chen, Z., Malpani, A., Chalasani, P., Deguet, A., Vedula, S. S., Kazanzides, P. & Taylor, R. H., Nov 28 2016, IROS 2016 - 2016 IEEE/RSJ International Conference on Intelligent Robots and Systems. Institute of Electrical and Electronics Engineers Inc., Vol. 2016-November. p. 2343-2350 8 p. 7759365

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Voxel based morphometry in optical coherence tomography: Validation & core findings

Antony, B. J., Chen, M., Carass, A., Jedynak, B. M., Al-Louzi, O., Solomon, S., Saidha, S., Calabresi, P. & Prince, J. L., 2016, Medical Imaging 2016: Biomedical Applications in Molecular, Structural, and Functional Imaging. SPIE, Vol. 9788. 97880P

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2015

A framework for individualizing predictions of disease trajectories by exploiting multi-resolution structure

Schulam, P. & Saria, S., 2015, Advances in Neural Information Processing Systems. Neural information processing systems foundation, Vol. 2015-January. p. 748-756 9 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

An improved model for segmentation and recognition of fine-grained activities with application to surgical training tasks

Lea, C., Hager, G. D. & Vidal, R., Feb 19 2015, Proceedings - 2015 IEEE Winter Conference on Applications of Computer Vision, WACV 2015. Institute of Electrical and Electronics Engineers Inc., p. 1123-1129 7 p. 7046008. (Proceedings - 2015 IEEE Winter Conference on Applications of Computer Vision, WACV 2015).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Beyond spatial pooling: Fine-grained representation learning in multiple domains

Li, C., Reiter, A. & Hager, G. D., Oct 14 2015, IEEE Conference on Computer Vision and Pattern Recognition, CVPR 2015. IEEE Computer Society, p. 4913-4922 10 p. 7299125. (Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition; vol. 07-12-June-2015).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

B-mode ultrasound pose recovery via surgical fiducial segmentation and tracking

Asoni, A., Ketcha, M., Kuo, N., Chen, L., Boctor, E., Coon, D. & Prince, J. L., Jan 1 2015, Medical Imaging 2015: Image-Guided Procedures, Robotic Interventions, and Modeling. Webster, R. J. & Yaniv, Z. R. (eds.). SPIE, 94152C. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 9415).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Clustering longitudinal clinical marker trajectories from electronic health data: Applications to phenotyping and endotype discovery

Schulam, P., Wigley, F. & Saria, S., Jun 1 2015, Proceedings of the 29th AAAI Conference on Artificial Intelligence, AAAI 2015 and the 27th Innovative Applications of Artificial Intelligence Conference, IAAI 2015. AI Access Foundation, p. 2956-2964 9 p. (Proceedings of the National Conference on Artificial Intelligence; vol. 4).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Comparison of optimization strategy and similarity metric in atlas-to-subject registration using statistical deformation model

Otake, Y., Murphy, R. J., Grupp, R. B., Sato, Y., Taylor, R. H. & Armand, M., Jan 1 2015, Medical Imaging 2015: Image-Guided Procedures, Robotic Interventions, and Modeling. Webster, R. J. & Yaniv, Z. R. (eds.). SPIE, 94150Q. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 9415).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Creating a data science platform for developing complication risk models for personalized treatment planning in radiation oncology

Marungo, F., Robertson, S., Quon, H., Rhee, J., Paisley, H., Taylor, R. H. & McNutt, T., Mar 26 2015, Proceedings of the 48th Annual Hawaii International Conference on System Sciences, HICSS 2015. Sprague, R. H. & Bui, T. X. (eds.). IEEE Computer Society, p. 3132-3140 9 p. 7070193. (Proceedings of the Annual Hawaii International Conference on System Sciences; vol. 2015-March).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Direct ultrasound to video registration using photoacoustic markers from a single image pose

Cheng, A., Guo, X., Kang, H. J., Choti, M. A., Kang, J. U., Taylor, R. H. & Boctor, E. M., Jan 1 2015, Advanced Biomedical and Clinical Diagnostic and Surgical Guidance Systems XIII. Vo-Dinh, T., Mahadevan-Jansen, A. & Grundfest, W. S. (eds.). SPIE, 93130X. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 9313).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Effects of micro-vibratory modulation during robot-assisted membrane peeling

Gonenc, B., Gehlbach, P., Taylor, R. H. & Iordachita, I., Dec 11 2015, IROS Hamburg 2015 - Conference Digest: IEEE/RSJ International Conference on Intelligent Robots and Systems. Institute of Electrical and Electronics Engineers Inc., p. 3811-3816 6 p. 7353912. (IEEE International Conference on Intelligent Robots and Systems; vol. 2015-December).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

FBG-based sensorized light pipe for robotic intraocular illumination facilitates bimanual retinal microsurgery

Horise, Y., He, X., Gehlbach, P., Taylor, R. & Iordachita, I., Nov 4 2015, 2015 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2015. Institute of Electrical and Electronics Engineers Inc., p. 13-16 4 p. 7318249. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS; vol. 2015-November).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Force-based puncture detection and active position holding for assisted retinal vein cannulation

Gonenc, B., Tran, N., Riviere, C. N., Gehlbach, P., Taylor, R. H. & Iordachita, I., Oct 9 2015, 2015 IEEE International Conference on Multisensor Fusion and lntegration for Intelligent Systems, MFI 2015. Institute of Electrical and Electronics Engineers Inc., p. 322-327 6 p. 7295828. (IEEE International Conference on Multisensor Fusion and Integration for Intelligent Systems; vol. 2015-October).

Research output: Chapter in Book/Report/Conference proceedingConference contribution