Whiting School of Engineering

Research Output

Article

Assessing system operation skills in robotic surgery trainees

Kumar, R., Jog, A., Malpani, A., Vagvolgyi, B., Yuh, D., Nguyen, H., Hager, G. & Chen, C. C. G., Mar 1 2012, In : International Journal of Medical Robotics and Computer Assisted Surgery. 8, 1, p. 118-124 7 p.

Research output: Contribution to journalArticle

Assessment of Automated Identification of Phases in Videos of Cataract Surgery Using Machine Learning and Deep Learning Techniques

Yu, F., Silva Croso, G., Kim, T. S., Song, Z., Parker, F., Hager, G., Reiter, A., Vedula, S. S., Ali, H. & Sikder, S., Apr 5 2019, In : JAMA network open. 2, 4, p. e191860

Research output: Contribution to journalArticle

Assessment of crohn's disease lesions in wireless capsule endoscopy images

Kumar, R., Zhao, Q., Seshamani, S., Mullin, G., Hager, G. & Dassopoulos, T., Feb 1 2012, In : IEEE Transactions on Biomedical Engineering. 59, 2, p. 355-362 8 p., 6051474.

Research output: Contribution to journalArticle

Assessment of distribution and evolution of Mechanical dyssynchrony in a porcine model of myocardial infarction by cardiovascular magnetic resonance

Abd-Elmoniem, K. Z., Tomas, M. S., Sasano, T., Soleimanifard, S., Vonken, E. J. P., Youssef, A., Agarwal, H., Dimaano, V. L., Calkins, H., Stuber, M., Prince, J. L., Abraham, T. P. & Abraham, M. R., May 9 2012, In : Journal of Cardiovascular Magnetic Resonance. 14, 1, 1.

Research output: Contribution to journalArticle

Association between Surgical Trainee Daytime Sleepiness and Intraoperative Technical Skill When Performing Septoplasty

Tseng, Y. W., Vedula, S. S., Malpani, A., Ahmidi, N., Boahene, K. D. O., Papel, I. D., Kontis, T. C., Maxwell, J., Wanamaker, J. R., Byrne, P. J., Malekzadeh, S., Hager, G. D., Ishii, L. E. & Ishii, M., Mar 1 2019, In : JAMA Facial Plastic Surgery. 21, 2, p. 104-109 6 p.

Research output: Contribution to journalArticle

Association of body mass index with longitudinal rates of retinal atrophy in multiple sclerosis

Filippatou, A. G., Lambe, J., Sotirchos, E. S., Fitzgerald, K. C., Aston, A., Murphy, O. C., Pellegrini, N., Fioravante, N., Risher, H., Ogbuokiri, E., Kwakyi, O., Toliver, B., Davis, S., Luciano, N., Crainiceanu, C., Prince, J. L., Mowry, E. M., Calabresi, P. A. & Saidha, S., Jun 1 2020, In : Multiple Sclerosis Journal. 26, 7, p. 843-854 12 p.

Research output: Contribution to journalArticle

A study of crowdsourced segment-level surgical skill assessment using pairwise rankings

Malpani, A., Vedula, S. S., Chen, C. C. G. & Hager, G. D., Sep 13 2015, In : International Journal of Computer Assisted Radiology and Surgery. 10, 9, p. 1435-1447 13 p.

Research output: Contribution to journalArticle

A sub-millimetric, 0.25 mN resolution fully integrated fiber-optic force-sensing tool for retinal microsurgery

Iordachita, I., Sun, Z., Balicki, M., Kang, J. U., Phee, S. J., Handa, J., Gehlbach, P. & Taylor, R., Jun 2009, In : International Journal of Computer Assisted Radiology and Surgery. 4, 4, p. 383-390 8 p.

Research output: Contribution to journalArticle

A submillimetric 3-DOF force sensing instrument with integrated fiber bragg grating for retinal microsurgery

He, X., Handa, J., Gehlbach, P., Taylor, R. & Iordachita, I., Feb 1 2014, In : IEEE Transactions on Biomedical Engineering. 61, 2, p. 522-534 13 p., 6609063.

Research output: Contribution to journalArticle

Asymmetric enrichment of PIE-1 in the Caenorhabditis elegans zygote mediated by binary counterdiffusion

Daniels, B. R., Perkins, E. M., Dobrowsky, T. M., Sun, S. X. & Wirtz, D., Feb 23 2009, In : Journal of Cell Biology. 184, 4, p. 473-479 7 p.

Research output: Contribution to journalArticle

Asymptotic expansions of integrals of two Bessel functions via the generalized hypergeometric and Meijer functions

Stoyanov, B. J., Farrell, R. A. & Bird, J. F., May 20 1994, In : Journal of Computational and Applied Mathematics. 50, 1-3, p. 533-543 11 p.

Research output: Contribution to journalArticle

A system for video-Based navigation for endoscopic endonasal skull base surgery

Mirota, D. J., Wang, H., Taylor, R. H., Ishii, M., Gallia, G. L. & Hager, G. D., Apr 1 2012, In : IEEE transactions on medical imaging. 31, 4, p. 963-976 14 p., 6084839.

Research output: Contribution to journalArticle

A tandem simulation framework for predicting mapping quality

Langmead, B., Aug 10 2017, In : Genome biology. 18, 1, 152.

Research output: Contribution to journalArticle

A targeted real-time early warning score (TREWScore) for septic shock

Henry, K. E., Hager, D. N., Pronovost, P. J. & Saria, S., Aug 5 2015, In : Science translational medicine. 7, 299, 299ra122.

Research output: Contribution to journalArticle

A Telerobotic Assistant for Laparoscopic Surgery

LaRose, D., Taylor, R. H., Funda, J., Eldridge, B., Gomory, S., Talamini, M., Kavoussi, L., Anderson, J. & Gruben, K., Jan 1 1995, In : IEEE Engineering in Medicine and Biology Magazine. 14, 3, p. 279-288 10 p.

Research output: Contribution to journalArticle

A Three-Dimensional Computational Human Head Model That Captures Live Human Brain Dynamics

Ganpule, S., Daphalapurkar, N. P., Ramesh, K. T., Knutsen, A. K., Pham, D. L., Bayly, P. V. & Prince, J. L., Jul 1 2017, In : Journal of neurotrauma. 34, 13, p. 2154-2166 13 p.

Research output: Contribution to journalArticle

A time-varying analogue of Jensen's formula

Iglesias, P. A., May 1 2001, In : Integral Equations and Operator Theory. 40, 1, p. 34-51 18 p.

Research output: Contribution to journalArticle

Atlas-based tongue muscle correlation analysis from tagged and high- resolution magnetic resonance imaging

Xing, F., Stone, M., Goldsmith, T., Prince, J. L., Fakhri, G. E. & Woo, J., Jul 2019, In : Journal of Speech, Language, and Hearing Research. 62, 7, p. 2258-2269 12 p.

Research output: Contribution to journalArticle

A topology preserving level set method for geometric deformable models

Han, X., Xu, C. & Prince, J. L., Jun 1 2003, In : IEEE Transactions on Pattern Analysis and Machine Intelligence. 25, 6, p. 755-768 14 p.

Research output: Contribution to journalArticle

Auditory force feedback substitution improves surgical precision during simulated ophthalmic surgery

Cutler, N., Balicki, M., Finkelstein, M., Wang, J., Gehlbach, P., McGready, J., Iordachita, I., Taylor, R. & Handa, J. T., Feb 1 2013, In : Investigative Ophthalmology and Visual Science. 54, 2, p. 1316-1324 9 p.

Research output: Contribution to journalArticle

Auditory-nerve encoding of pinna-based spectral cues: Rate representation of high-frequency stimuli

Rice, J. J., Young, E. D. & Spirou, G. A., Mar 1995, In : Journal of the Acoustical Society of America. 97, 3, p. 1764-1776 13 p.

Research output: Contribution to journalArticle

Augmented reality and cone beam CT guidance for transoral robotic surgery

Liu, W. P., Richmon, J. D., Sorger, J. M., Azizian, M. & Taylor, R. H., Sep 21 2015, In : Journal of Robotic Surgery. 9, 3, p. 223-233 11 p.

Research output: Contribution to journalArticle

Augmented reality-based feedback for technician-in-the-loop C-arm repositioning

Unberath, M., Fotouhi, J., Hajek, J., Maier, A., Osgood, G., Taylor, R. H., Armand, M. & Navab, N., Jan 1 2018, In : Healthcare Technology Letters. 5, 5, p. 143-147 5 p.

Research output: Contribution to journalArticle

Augmented Reality During Robot-assisted Laparoscopic Partial Nephrectomy: Toward Real-Time 3D-CT to Stereoscopic Video Registration

Su, L. M., Vagvolgyi, B. P., Agarwal, R., Reiley, C. E., Taylor, R. H. & Hager, G. D., Apr 1 2009, In : Urology. 73, 4, p. 896-900 5 p.

Research output: Contribution to journalArticle

Automated cerebellar lobule segmentation with application to cerebellar structural analysis in cerebellar disease

Yang, Z., Ye, C., Bogovic, J. A., Carass, A., Jedynak, B. M., Ying, S. H. & Prince, J. L., Feb 15 2016, In : NeuroImage. 127, p. 435-444 10 p.

Research output: Contribution to journalArticle

Automated characterization of cell shape changes during amoeboid motility by skeletonization

Xiong, Y., Kabacoff, C., Franca-Koh, J., Devreotes, P. N., Robinson, D. N. & Iglesias, P. A., Mar 24 2010, In : BMC Systems Biology. 4, 33.

Research output: Contribution to journalArticle

Automated detection & classification of knee arthroplasty using deep learning

Yi, P. H., Wei, J., Kim, T. K., Sair, H. I., Hui, F. K., Hager, G. D., Fritz, J. & Oni, J. K., Mar 2020, In : Knee. 27, 2, p. 535-542 8 p.

Research output: Contribution to journalArticle

Automated detection and classification of shoulder arthroplasty models using deep learning

Yi, P. H., Kim, T. K., Wei, J., Li, X., Hager, G. D., Sair, H. I. & Fritz, J., Jan 1 2020, (Accepted/In press) In : Skeletal Radiology.

Research output: Contribution to journalArticle

Automated image alignment and segmentation to follow progression of geographic atrophy in age-related macular degeneration

Ramsey, D. J., Sunness, J. S., Malviya, P., Applegate, C., Hager, G. D. & Handa, J. T., Jul 2014, In : Retina. 34, 7, p. 1296-1307 12 p.

Research output: Contribution to journalArticle

Automated MRI parcellation of the frontal lobe

Ranta, M. E., Chen, M., Crocetti, D., Prince, J. L., Subramaniam, K., Fischl, B., Kaufmann, W. E. & Mostofsky, S. H., May 2014, In : Human Brain Mapping. 35, 5, p. 2009-2026 18 p.

Research output: Contribution to journalArticle

Automated objective surgical skill assessment in the operating room from unstructured tool motion in septoplasty

Ahmidi, N., Poddar, P., Jones, J. D., Vedula, S. S., Ishii, L., Hager, G. D. & Ishii, M., Jun 1 2015, In : International Journal of Computer Assisted Radiology and Surgery. 10, 6, p. 981-991 11 p.

Research output: Contribution to journalArticle

Automated segmentation of mouse OCT volumes (ASiMOV): Validation & clinical study of a light damage model

Antony, B. J., Kim, B. J., Lang, A., Carass, A., Prince, J. L. & Zack, D. J., Aug 1 2017, In : PLoS One. 12, 8, e0181059.

Research output: Contribution to journalArticle

Automated semantic labeling of pediatric musculoskeletal radiographs using deep learning

Yi, P. H., Kim, T. K., Wei, J., Shin, J., Hui, F. K., Sair, H. I., Hager, G. D. & Fritz, J., Jul 1 2019, In : Pediatric radiology. 49, 8, p. 1066-1070 5 p.

Research output: Contribution to journalArticle

Automated sulcal segmentation using watersheds on the cortical surface

Rettmann, M. E., Han, X., Xu, C. & Prince, J. L., Jan 1 2002, In : NeuroImage. 15, 2, p. 329-344 16 p., 90975.

Research output: Contribution to journalArticle

Automatic 3D tracking of cardiac material markers using slice-following and harmonic-phase MRI

Sampath, S. & Prince, J. L., Feb 1 2007, In : Magnetic Resonance Imaging. 25, 2, p. 197-208 12 p.

Research output: Contribution to journalArticle

Automatic annotation of hip anatomy in fluoroscopy for robust and efficient 2D/3D registration

Grupp, R. B., Unberath, M., Gao, C., Hegeman, R. A., Murphy, R. J., Alexander, C. P., Otake, Y., McArthur, B. A., Armand, M. & Taylor, R. H., May 1 2020, In : International Journal of Computer Assisted Radiology and Surgery. 15, 5, p. 759-769 11 p.

Research output: Contribution to journalArticle

Automatic cerebellum anatomical parcellation using U-Net with locally constrained optimization

Han, S., Carass, A., He, Y. & Prince, J. L., Sep 2020, In : NeuroImage. 218, 116819.

Research output: Contribution to journalArticle

Open Access

Automatic magnetic resonance spinal cord segmentation with topology constraints for variable fields of view

Chen, M., Carass, A., Oh, J., Nair, G., Pham, D. L., Reich, D. S. & Prince, J. L., Dec 2013, In : NeuroImage. 83, p. 1051-1062 12 p.

Research output: Contribution to journalArticle

Automatic segmentation of microcystic macular edema in OCT

Lang, A., Carass, A., Swingle, E. K., Al-Louzi, O., Bhargava, P., Saidha, S., Ying, H., Calabresi, P. A. & Prince, J. L., Jan 1 2015, In : Biomedical Optics Express. 6, 1, p. 155-169 15 p.

Research output: Contribution to journalArticle

Automatic segmentation of radiographic fiducial and seeds from X-ray images in prostate brachytherapy

Kuo, N., Deguet, A., Song, D. Y., Burdette, E. C., Prince, J. L. & Lee, J., Jan 1 2012, In : Medical Engineering and Physics. 34, 1, p. 64-77 14 p.

Research output: Contribution to journalArticle

Automatic Synthesis of Fine-Motion Strategies for Robots

Lozano-Pérez, T., Mason, M. T. & Taylor, R. H., Mar 1984, In : The International Journal of Robotics Research. 3, 1, p. 3-24 22 p.

Research output: Contribution to journalArticle

A Variational Principle for Scattering from Rough Surfaces

Hart, R. W. & Farrell, R. A., Sep 1977, In : IEEE Transactions on Antennas and Propagation. 25, 5, p. 708-710 3 p.

Research output: Contribution to journalArticle

A variational principle for the scattered wave

Freund, D. E. & Farrell, R. A., May 1990, In : Journal of the Acoustical Society of America. 87, 5, p. 1847-1860 14 p.

Research output: Contribution to journalArticle

A vector wiener filter for dual-radionuclide imaging

Links, J. M., Prince, J. L. & Gupta, S. N., Dec 1 1996, In : IEEE transactions on medical imaging. 15, 5, p. 700-709 10 p.

Research output: Contribution to journalArticle

Ballistic intracellular nanorheology reveals ROCK-hard cytoplasmic stiffening response to fluid flow

Lee, J. S. H., Panorchan, P., Hale, C. M., Khatau, S. B., Kole, T. P., Tseng, Y. & Wirtz, D., May 1 2006, In : Journal of cell science. 119, 9, p. 1760-1768 9 p.

Research output: Contribution to journalArticle

Bandpass optical flow for tagged MRI

Prince, J. L., Gupta, S. N. & Osman, N. F., Jan 2000, In : Medical physics. 27, 1, p. 108-118 11 p.

Research output: Contribution to journalArticle

Basic principles of polarity establishment and maintenance. Conference on Mechanisms of Cell Polarity

Arkowitz, R. A. & Iglesias, P. A., Aug 26 2008, In : EMBO Reports. 9, 9, p. 847-852 6 p.

Research output: Contribution to journalArticle

Benchmarking and analysis of protein docking performance in Rosetta v3.2

Chaudhury, S., Berrondo, M., Weitzner, B. D., Muthu, P., Bergman, H. & Gray, J. J., Aug 5 2011, In : PloS one. 6, 8, e22477.

Research output: Contribution to journalArticle

Bias-dependent admittance in hybrid bilayer membranes

Nikolov, V., Radisic, A., Hristova, K. & Searson, P. C., Aug 15 2006, In : Langmuir. 22, 17, p. 7156-7158 3 p.

Research output: Contribution to journalArticle

Big data in health care: Using analytics to identify and manage high-risk and high-cost patients

Bates, D. W., Saria, S., Ohno-Machado, L., Shah, A. & Escobar, G., 2014, In : Health Affairs. 33, 7, p. 1123-1131 9 p.

Research output: Contribution to journalArticle