Whiting School of Engineering

Research Output

Analysis of composite gestures with a coherent probabilistic graphical model

Corso, J. J., Ye, G. & Hager, G. D., Sep 2005, In : Virtual Reality. 8, 4, p. 242-252 11 p.

Research output: Contribution to journalArticle

Analysis of Crohn's disease lesions in capsule endoscopy images

Bejakovic, S., Kumar, R., Dassopoulos, T., Mullin, G. & Hager, G., Nov 2 2009, 2009 IEEE International Conference on Robotics and Automation, ICRA '09. p. 2793-2798 6 p. 5152774. (Proceedings - IEEE International Conference on Robotics and Automation).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Analysis of fiber strain in the human tongue during speech

Gomez, A. D., Stone, M. L., Woo, J., Xing, F. & Prince, J. L., Jun 10 2020, In : Computer Methods in Biomechanics and Biomedical Engineering. 23, 8, p. 312-322 11 p.

Research output: Contribution to journalArticle

Analysis of HIV-1 fusion peptide inhibition by synthetic peptides from E1 protein of GB virus C

Sánchez-Martín, M. J., Hristova, K., Pujol, M., Gómara, M. J., Haro, I., Asunción Alsina, M. & Antònia Busquets, M., Aug 1 2011, In : Journal of Colloid And Interface Science. 360, 1, p. 124-131 8 p.

Research output: Contribution to journalArticle

Analysis of macular OCT images using deformable registration

Chen, M., Lang, A., Ying, H. S., Calabresi, P. A., Prince, J. L. & Carass, A., Jun 1 2014, In : Biomedical Optics Express. 5, 7, p. 2196-2214 19 p.

Research output: Contribution to journalArticle

Analysis of protein kinase autophosphorylation using expressed protein ligation and computational modeling

Pickin, K. A., Chaudhury, S., Dancy, B. C. R., Gray, J. J. & Cole, P. A., Apr 30 2008, In : Journal of the American Chemical Society. 130, 17, p. 5667-5669 3 p.

Research output: Contribution to journalArticle

Analysis of selectin binding to immobilized glycosphingolipids under flow conditions

Burdick, M. & Konstantopoulos, K., Dec 1 2000, In : Annals of biomedical engineering. 28, SUPPL. 1, p. S-88

Research output: Contribution to journalConference article

Analysis of the signal transduction properties of a module of spatial sensing in eukaryotic chemotaxis

Krishnan, J. & Iglesias, P. A., Jan 2003, In : Bulletin of Mathematical Biology. 65, 1, p. 95-128 34 p.

Research output: Contribution to journalArticle

Analysis of the structure of surgical activity for a suturing and knot-tying task

Vedula, S. S., Malpani, A. O., Tao, L., Chen, G., Gao, Y., Poddar, P., Ahmidi, N., Paxton, C., Vidal, R., Khudanpur, S., Hager, G. & Chen, C. C. G., Mar 1 2016, In : PLoS One. 11, 3, e0149174.

Research output: Contribution to journalArticle

Analytical characterization of plasma membrane-derived vesicles produced via osmotic and chemical vesiculation

Sarabipour, S., Chan, R. B., Zhou, B., Di Paolo, G. & Hristova, K., Jul 1 2015, In : Biochimica et Biophysica Acta - Biomembranes. 1848, 7, p. 1591-1598 8 p.

Research output: Contribution to journalArticle

Analyzing and exploiting NARX recurrent neural networks for long-term dependencies

DiPietro, R., Rupprecht, C., Navab, N. & Hager, G. D., Jan 1 2018.

Research output: Contribution to conferencePaper

An analogue of Bode's sensitivity integral for continuous-time, time-varying systems

Iglesias, P. A., Jan 1 2001, In : Proceedings of the American Control Conference. 1, p. 529-534 6 p.

Research output: Contribution to journalConference article

An analytical model for determining two-dimensional receptor-ligand kinetics

Cheung, L. S. L. & Konstantopoulos, K., May 18 2011, In : Biophysical journal. 100, 10, p. 2338-2346 9 p.

Research output: Contribution to journalArticle

An application of a variational principle for scattering by random rough surfaces

Gray, E. P., Hart, R. W. & Farrell, R. A., Jan 1 1978, In : Radio Science. 13, 2, p. 333-343 11 p.

Research output: Contribution to journalArticle

Anatomically constrained video-CT registration via the V-IMLOP algorithm

Billings, S. D., Sinha, A., Reiter, A., Leonard, S., Ishii, M., Hager, G. & Taylor, R. H., 2016, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016 - 19th International Conference, Proceedings. Springer Verlag, Vol. 9902 LNCS. p. 133-141 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9902 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Anatomical reconstruction from endoscopic images: Toward quantitative endoscopy

Wang, H., Mirota, D., Hager, G. & Ishii, M., Jan 1 2008, In : American Journal of Rhinology. 22, 1, p. 47-51 5 p.

Research output: Contribution to journalArticle

Anatomical reconstructions of pediatric airways from endoscopic images: A pilot study of the accuracy of quantitative endoscopy

Meisner, E. M., Hager, G. D., Ishman, S. L., Brown, D., Tunkel, D. E. & Ishii, M., Nov 1 2013, In : Laryngoscope. 123, 11, p. 2880-2887 8 p.

Research output: Contribution to journalArticle

Anatomy-based registration of CT-scan and x-ray fluoroscopy data for intraoperative guidance of a surgical robot

Guéziec, A. P., Kazanzides, P., Williamson, B., Taylor, R. H. & Lord, D., Dec 1 1998, In : Proceedings of SPIE - The International Society for Optical Engineering. 3338, p. 81-94 14 p.

Research output: Contribution to journalConference article

An augmentation system for fine manipulation

Kumar, R., Hager, G. D., Barnes, A., Jensen, P. & Taylor, R. H., 2000, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2000 - 3rd International Conference, Proceedings. Delp, S. L., DiGoia, A. M. & Jaramaz, B. (eds.). Springer Verlag, p. 956-965 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 1935).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access

An automated images-to-graphs framework for high resolution connectomics

Gray Roncal, W. R., Kleissas, D. M., Vogelstein, J. T., Manavalan, P., Lillaney, K., Pekala, M., Burns, R., Vogelstein, R. J., Priebe, C. E., Chevillet, M. A. & Hager, G. D., Aug 15 2015, In : Frontiers in Neuroinformatics. 9, AUGUST, 20.

Research output: Contribution to journalArticle

An automated method for finding curves of sulcal FUNDI on human cortical surfaces

Tao, X., Prince, J. L. & Davatzikos, C., Dec 1 2004, 2004 2nd IEEE International Symposium on Biomedical Imaging: Macro to Nano. p. 1271-1274 4 p. (2004 2nd IEEE International Symposium on Biomedical Imaging: Macro to Nano; vol. 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

An automated system for precise percutaneous access of the renal collecting system

Bzostek, A., Schreiner, S., Barnes, A. G., Cadeddu, J. A., Roberts, W. W., Anderson, J. H., Taylor, R. H. & Kavoussi, L., Jan 1 1997, CVRMed-MRCAS 1997 - 1st Joint Conference Computer Vision, Virtual Reality and Robotics in Medicine and Medical Robotics and Computer-Assisted Surgery, Proceedings. Troccaz, J., Grimson, E. & Mösges, R. (eds.). Springer Verlag, p. 299-308 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 1205).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

An automated technique for statistical characterization of brain tissues in magnetic resonance imaging

Pham, D., Prince, J. L., Xu, C. & Dagher, A. P., Dec 1997, In : International Journal of Pattern Recognition and Artificial Intelligence. 11, 8, p. 1189-1211 23 p.

Research output: Contribution to journalArticle

An efficient needle injection technique and radiological guidance method for percutaneous procedures

Stoianovici, D., Cadeddu, J. A., Demaree, R. D., Basile, S. A., Taylor, R. H., Whitcomb, L. L., Sharpe, W. N. & Kavoussi, L. R., 1997, CVRMed-MRCAS 1997 - 1st Joint Conference Computer Vision, Virtual Reality and Robotics in Medicine and Medical Robotics and Computer-Assisted Surgery, Proceedings. Troccaz, J., Grimson, E. & Mösges, R. (eds.). Springer Verlag, p. 295-298 4 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 1205).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

An entropy formula for time-varying discrete-time control systems

Iglesias, P. A., Sep 1996, In : SIAM Journal on Control and Optimization. 34, 5, p. 1691-1706 16 p.

Research output: Contribution to journalArticle

An Eulerian PDE Approach for Computing Tissue Thickness

Yezzi, A. J. & Prince, J. L., Oct 1 2003, In : IEEE transactions on medical imaging. 22, 10, p. 1332-1339 8 p.

Research output: Contribution to journalArticle

A new ENT microsurgery robot: Error analysis and implementation

He, C., Olds, K., Iordachita, I. & Taylor, R., Nov 14 2013, 2013 IEEE International Conference on Robotics and Automation, ICRA 2013. p. 1221-1227 7 p. 6630727. (Proceedings - IEEE International Conference on Robotics and Automation).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

A new interactive surface editing tool for generating truth models of the human cortical surface

Yu, D. N., Xu, C. & Prince, J. L., Jan 1 2000, In : NeuroImage. 11, 5 PART II, p. S672

Research output: Contribution to journalArticle

A new method to study heterodimerization of membrane proteins and its application to fibroblast growth factor receptors

Del Piccolo, N., Sarabipour, S. & Hristova, K. A., Jan 27 2017, In : Journal of Biological Chemistry. 292, 4, p. 1188-1301 114 p.

Research output: Contribution to journalArticle

An excitable signal integrator couples to an idling cytoskeletal oscillator to drive cell migration

Huang, C. H., Tang, M., Shi, C., Iglesias, P. A. & Devreotes, P. N., Nov 1 2013, In : Nature cell biology. 15, 11, p. 1307-1316 10 p.

Research output: Contribution to journalArticle

An experiment-based algorithm for predicting the partitioning of unfolded peptides into phosphatidylcholine bilayer interfaces

Hristova, K. & White, S. H., Sep 20 2005, In : Biochemistry. 44, 37, p. 12614-12619 6 p.

Research output: Contribution to journalArticle

Angle images for measuring heart motion from tagged MRI

Osman, N. F. & Prince, J. L., Dec 1 1998, p. 704-708. 5 p.

Research output: Contribution to conferencePaper

An image-guidance system for dynamic dose calculation in prostate brachytherapy using ultrasound and fluoroscopy

Kuo, N., Dehghan, E., Deguet, A., Mian, O. Y., Le, Y., Burdette, E. C., Fichtinger, G., Prince, J. L., Song, D. Y. & Lee, J., Sep 2014, In : Medical physics. 41, 9, 091712.

Research output: Contribution to journalArticle

An image-guided femoroplasty system: Development and initial cadaver studies

Otake, Y., Armand, M., Sadowsky, O., Armiger, R. S., Kutzer, M. D., Mears, S. C., Kazanzides, P. & Taylor, R. H., Jan 1 2010, Medical Imaging 2010: Visualization, Image-Guided Procedures, and Modeling. Wong, K. H. & Miga, M. I. (eds.). SPIE, 76250P. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7625).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

An image overlay system with enhanced reality for percutaneous therapy performed inside CT scanner

Masamune, K., Fichtinger, G., Deguet, A., Matsuka, D. & Taylor, R., Jan 1 2002, Medical Image Computing and Computer-Assisted Intervention - 5th International Conference, MICCAI 2002, Proceedings. Dohi, T. & Kikinis, R. (eds.). Springer Verlag, p. 77-84 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 2489).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access

An improved model for segmentation and recognition of fine-grained activities with application to surgical training tasks

Lea, C., Hager, G. D. & Vidal, R., Feb 19 2015, Proceedings - 2015 IEEE Winter Conference on Applications of Computer Vision, WACV 2015. Institute of Electrical and Electronics Engineers Inc., p. 1123-1129 7 p. 7046008. (Proceedings - 2015 IEEE Winter Conference on Applications of Computer Vision, WACV 2015).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

An incremental approach to learning generalizable robot tasks from human demonstration

Ghalamzan E., A. M., Paxton, C., Hager, G. D. & Bascetta, L., Jun 29 2015, In : Proceedings - IEEE International Conference on Robotics and Automation. 2015-June, June, p. 5616-5621 6 p., 7139985.

Research output: Contribution to journalConference article

An Individualized, Data-Driven Digital Approach for Precision Behavior Change

Wongvibulsin, S., Martin, S. S., Saria, S., Zeger, S. L. & Murphy, S. A., May 1 2020, In : American Journal of Lifestyle Medicine. 14, 3, p. 289-293 5 p.

Research output: Contribution to journalReview article

An infinite sum of products of Jacobi polynomials

Farrell, R. A., Gray, E. P. & Hart, R. W., Jan 1 1988, In : Journal of Mathematical Physics. 29, 10, p. 2175-2177 3 p.

Research output: Contribution to journalArticle

An information-theoretic characterization of the optimal gradient sensing response of cells

Andrews, B. W. & Iglesias, P. A., Aug 2007, In : PLoS computational biology. 3, 8, p. 1489-1497 9 p.

Research output: Contribution to journalArticle

An Integrated Framework Advancing Membrane Protein Modeling and Design

Alford, R. F., Koehler Leman, J., Weitzner, B. D., Duran, A. M., Tilley, D. C., Elazar, A. & Gray, J. J., Jan 1 2015, In : PLoS computational biology. 11, 9, e1004398.

Research output: Contribution to journalArticle

An integrative approach to understanding mechanosensation

Poirier, C. C. & Iglesias, P. A., Jul 1 2007, In : Briefings in bioinformatics. 8, 4, p. 258-265 8 p.

Research output: Contribution to journalReview article

An intelligent system to detect Crohn's disease inflammation in wireless capsule endoscopy videos

Girgis, H. Z., Mitchell, B. R., Dassopoulos, T., Mullin, G. & Hager, G., Aug 9 2010, 2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings. p. 1373-1376 4 p. 5490253. (2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

An in vivo comparison of hip structure analysis (HSA) with measurements obtained by QCT

Ramamurthi, K., Ahmad, O., Engelke, K., Taylor, R. H., Zhu, K., Gustafsson, S., Prince, R. L. & Wilson, K. E., Feb 1 2012, In : Osteoporosis International. 23, 2, p. 543-551 9 p.

Research output: Contribution to journalArticle

An iterative approach to sinogram restoration

Prince, J. L., Dec 1 1990, Biomedical Engineering Perspectives: Health Care Technologies for the 1990's and Beyond. pt 1 ed. Publ by IEEE, p. 366-367 2 p. (Proceedings of the Annual Conference on Engineering in Medicine and Biology; no. pt 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

An iterative framework for improving the accuracy of intraoperative intensity-based 2D/3D registration for image-guided orthopedic surgery

Otake, Y., Armand, M., Sadowsky, O., Armiger, R. S., Kazanzides, P. & Taylor, R. H., Dec 1 2010, Information Processing in Computer-Assisted Interventions - First International Conference, IPCAI 2010, Proceedings. p. 23-33 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6135 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution