School of Arts and Sciences

Research Output 1967 2017

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2017

Acidic C-terminal domains autoregulate the RNA chaperone Hfq

Santiago-Frangos, A., Jeliazkov, J. R., Gray, J. J. & Woodson, S. A. Aug 9 2017 In : eLife. 6, e27049

Research output: Research - peer-reviewArticle

RNA
Escherichia coli
Messenger RNA
Proteins
Bacterial RNA

Anatomical and Behavioral Investigation of C1ql3 in the Mouse Suprachiasmatic Nucleus

Chew, K. S., Fernandez, D. C., Hattar, S., Südhof, T. C. & Martinelli, D. C. Jun 1 2017 In : Journal of Biological Rhythms. 32, 3, p. 222-236 15 p.

Research output: Research - peer-reviewArticle

Suprachiasmatic Nucleus
Synapses
Physiological Phenomena
Photoperiod
Circadian Rhythm

An LHX1-Regulated Transcriptional Network Controls Sleep/Wake Coupling and Thermal Resistance of the Central Circadian Clockworks

Bedont, J. L., LeGates, T. A., Buhr, E., Bathini, A., Ling, J. P., Bell, B., Wu, M. N., Wong, P. C., Van Gelder, R. N., Mongrain, V., Hattar, S. & Blackshaw, S. Jan 9 2017 In : Current Biology. 27, 1, p. 128-136 9 p.

Research output: Research - peer-reviewArticle

Suprachiasmatic Nucleus
Gene Regulatory Networks
Sleep
Hot Temperature
vasoactive intestinal peptide

A novel lipoate attachment enzyme is shared by Plasmodium and Chlamydia species

Afanador, G. A., Guerra, A. J., Swift, R. P., Rodriguez, R. E., Bartee, D., Matthews, K. A., Schön, A., Freire, E., Freel Meyers, C. L. & Prigge, S. T. Nov 1 2017 In : Molecular Microbiology. 106, 3, p. 439-451 13 p.

Research output: Research - peer-reviewArticle

Plasmodium
Chlamydia
Oxidation-Reduction
Enzymes
Lipoylation

A subset of iprgcs regulates both maturation of the circadian clock and segregation of retinogeniculate projections in mice

Chew, K. S., Renna, J. M., McNeill, D. S., Fernandez, D. C., Keenan, W. T., Thomsen, M. B., Ecker, J. L., Loevinsohn, G. S., Vandunk, C., Vicarel, D. C., Tufford, A., Weng, S., Gray, P. A., Cayouette, M., Herzog, E. D., Zhao, H., Berson, D. M. & Hattar, S. Jun 15 2017 In : eLife. 6, e22861

Research output: Research - peer-reviewArticle

Circadian Clocks
Retinal Ganglion Cells
Clocks
Light
Networks (circuits)

Attentive pointing in natural scenes correlates with other measures of attention

Jeck, D. M., Qin, M., Egeth, H. & Niebur, E. Jun 1 2017 In : Vision Research. 135, p. 54-64 11 p.

Research output: Research - peer-reviewArticle

Fingers
Self Report
Tablets

Bilateral parietal activations for complex visual-spatial functions: Evidence from a visual-spatial construction task

Seydell-Greenwald, A., Ferrara, K., Chambers, C. E., Newport, E. L. & Landau, B. Nov 1 2017 In : Neuropsychologia. 106, p. 194-206 13 p.

Research output: Research - peer-reviewArticle

Functional Neuroimaging
Brain
Spatial Navigation
Cerebral Dominance
Apraxias

Cognitive processes in spatial mapping: Evidence from a developmental spatial deficit

Hatfield, M., Reilhac, C., Cowley, H., Chang, E. & McCloskey, M. Oct 27 2017 (Accepted/In press) In : Cognitive Neuropsychology. p. 1-18 18 p.

Research output: Research - peer-reviewArticle

Cognitive Processes
Spatial Processing
Stimulus
Dissociation
Cognitive Operations

Crystal structures of trimeric HIV envelope with entry inhibitors BMS-378806 and BMS-626529

Pancera, M. , Lai, Y. T. , Bylund, T. , Druz, A. , Narpala, S. , O'Dell, S. , Schön, A. , Bailer, R. T. , Chuang, G. Y. , Geng, H. , Louder, M. K. , Rawi, R. , Soumana, D. I. , Finzi, A. , Herschhorn, A. , Madani, N. , Sodroski, J. , Freire, E. , Langley, D. R. , Mascola, J. R. & 2 others McDermott, A. B. & Kwong, P. D. Oct 1 2017 In : Nature chemical biology. 13, 10, p. 1115-1122 8 p.

Research output: Research - peer-reviewArticle

HIV-1
HIV
BMS-378806
BMS-626529
Phase III Clinical Trials

C-terminal phosphorylation regulates the kinetics of a subset of melanopsin-mediated behaviors in mice

Somasundaram, P., Wyrick, G. R., Fernandez, D. C., Ghahari, A., Pinhal, C. M., Richardson, M. S., Rupp, A. C., Cui, L., Wu, Z., Brown, R. L., Badea, T. C., Hattar, S. & Robinson, P. R. Mar 7 2017 In : Proceedings of the National Academy of Sciences of the United States of America. 114, 10, p. 2741-2746 6 p.

Research output: Research - peer-reviewArticle

Phosphorylation
melanopsin
Light
Retinal Ganglion Cells
Vertebrate Photoreceptor Cells
Corpus Striatum
Dopamine Receptors
Dopamine
Raclopride
Positron-Emission Tomography

Developmental dysgraphia: An overview and framework for research

McCloskey, M. & Rapp, B. Sep 15 2017 (Accepted/In press) In : Cognitive Neuropsychology. p. 1-18 18 p.

Research output: Research - peer-reviewArticle

Agraphia
Research
Dysgraphia
Agenda
Causes

Disability Measurement in the Health and Retirement Study

Agree, E. M. & Wolf, D. A. Oct 31 2017 (Accepted/In press) In : Unknown Journal. 20170029

Research output: Research - peer-reviewArticle

Retirement
Health and Retirement Study
Survey research
Health
Surveys and Questionnaires

Dissociable effects on birdsong of androgen signaling in cortex-like brain regions of canaries

Alward, B. A., Balthazart, J. & Ball, G. F. Sep 6 2017 In : Journal of Neuroscience. 37, 36, p. 8612-8624 13 p.

Research output: Research - peer-reviewArticle

Canaries
Music
Androgens
Brain
Androgen Receptor Antagonists

Dissociating intuitive physics from intuitive psychology: Evidence from Williams syndrome

Kamps, F. S., Julian, J. B., Battaglia, P., Landau, B., Kanwisher, N. & Dilks, D. D. Nov 1 2017 In : Cognition. 168, p. 146-153 8 p.

Research output: Research - peer-reviewArticle

Williams Syndrome
Psychology
Physics
physics
psychology

Do reading and spelling share orthographic representations? Evidence from developmental dysgraphia

Hepner, C., McCloskey, M. & Rapp, B. Sep 22 2017 (Accepted/In press) In : Cognitive Neuropsychology. p. 1-25 25 p.

Research output: Research - peer-reviewArticle

Orthographic Representations
Dysgraphia
Spelling
Agraphia
Reading

Evolution of protein-coupled RNA dynamics during hierarchical assembly of ribosomal complexes

Abeysirigunawardena, S. C., Kim, H., Lai, J., Ragunathan, K., Rappé, M. C., Luthey-Schulten, Z., Ha, T. & Woodson, S. A. Dec 1 2017 In : Nature Communications. 8, 1, 492

Research output: Research - peer-reviewArticle

RNA
Proteins
assembly
proteins
Ribosomal RNA

Griffith observatory: Hollywood’s celestial theater

Leslie, S. W. & Margolis, E. A. Apr 3 2017 In : Early Popular Visual Culture. 15, 2, p. 227-246 20 p.

Research output: Research - peer-reviewArticle

theater
community
Hollywood
Observatory
institute of technology

Increased hippocampal activation in ApoE-4 carriers and non-carriers with amnestic mild cognitive impairment

Tran, T. T., Speck, C. L., Pisupati, A., Gallagher, M. & Bakker, A. 2017 In : NeuroImage: Clinical. 13, p. 237-245 9 p.

Research output: Research - peer-reviewArticle

Apolipoproteins E
Cognitive Dysfunction
Hippocampus
Magnetic Resonance Imaging
Dentate Gyrus

Intrahemispheric Perfusion in Chronic Stroke-Induced Aphasia

Thompson, C. K., Walenski, M., Chen, Y., Caplan, D., Kiran, S., Rapp, B., Grunewald, K., Nunez, M., Zinbarg, R. & Parrish, T. B. 2017 In : Neural Plasticity. 2017, 2361691

Research output: Research - peer-reviewArticle

Aphasia
Language
Perfusion
Stroke
Cerebrovascular Circulation

Intraocular injection of ES cell-derived neural progenitors improve visual function in retinal ganglion cell-depleted mouse models

Divya, M. S., Rasheed, V. A., Schmidt, T., Lalitha, S., Hattar, S. & James, J. Sep 20 2017 In : Frontiers in Cellular Neuroscience. 11, 295

Research output: Research - peer-reviewArticle

Intraocular Injections
Retinal Ganglion Cells
Glaucoma
Transplantation
Cell Lineage

Investigating the mechanisms of written word production: insights from the written blocked cyclic naming paradigm

Breining, B. & Rapp, B. Apr 12 2017 (Accepted/In press) In : Reading and Writing. p. 1-30 30 p.

Research output: Research - peer-reviewArticle

paradigm
Semantics
Reading
Learning
experiment

Keeping track of where we are: Spatial working memory in navigation

Blacker, K. J., Weisberg, S. M., Newcombe, N. S. & Courtney, S. M. Jun 6 2017 (Accepted/In press) In : Visual Cognition. p. 1-12 12 p.

Research output: Research - peer-reviewArticle

Navigation
Working Memory
Short-Term Memory
Spatial Memory
Route

Lhx6-positive GABA-releasing neurons of the zona incerta promote sleep

Liu, K., Kim, J., Kim, D. W., Zhang, Y. S., Bao, H., Denaxa, M., Lim, S. A., Kim, E., Liu, C., Wickersham, I. R., Pachinis, V., Hattar, S., Song, J., Brown, S. P. & Blackshaw, S. Aug 31 2017 In : Nature. 548, 7669, p. 582-587 6 p.

Research output: Research - peer-reviewArticle

GABAergic Neurons
Sleep
Zona Incerta
Neurons
Orexins

Linking dopaminergic reward signals to the development of attentional bias: A positron emission tomographic study

Anderson, B. A., Kuwabara, H., Wong, D. F., Roberts, J., Rahmim, A., Brašić, J. R. & Courtney, S. M. Aug 15 2017 In : NeuroImage. 157, p. 27-33 7 p.

Research output: Research - peer-reviewArticle

Reward
Electrons
Attentional Bias
Dopamine
Learning

Long days enhance recognition memory and increase insulin-like growth factor 2 in the hippocampus

Dellapolla, A., Kloehn, I., Pancholi, H., Callif, B., Wertz, D., Rohr, K. E., Hurley, M. M., Baker, K. M., Hattar, S., Gilmartin, M. R. & Evans, J. A. Dec 1 2017 In : Scientific Reports. 7, 1, 3925

Research output: Research - peer-reviewArticle

Somatomedins
Hippocampus
Light
Recognition (Psychology)
Insulin

Metals induce transient folding and activation of the twister ribozyme

Panja, S., Hua, B., Zegarra, D., Ha, T. & Woodson, S. A. Oct 1 2017 In : Nature chemical biology. 13, 10, p. 1109-1114 6 p.

Research output: Research - peer-reviewArticle

Catalytic RNA
Metals
Ions
Catalysis
Magnesium Chloride

Mood, the Circadian System, and Melanopsin Retinal Ganglion Cells

Lazzerini Ospri, L., Prusky, G. & Hattar, S. Jul 25 2017 In : Annual Review of Neuroscience. 40, p. 539-556 18 p.

Research output: Research - peer-reviewArticle

Retinal Ganglion Cells
melanopsin
Light
Periodicity
Causality

Perineuronal nets and vocal plasticity in songbirds: A proposed mechanism to explain the difference between closed-ended and open-ended learning

Cornez, G., Madison, F. N., Van der Linden, A., Cornil, C., Yoder, K. M., Ball, G. F. & Balthazart, J. 2017 (Accepted/In press) In : Developmental Neurobiology.

Research output: Research - peer-reviewArticle

Songbirds
Music
Learning
Parvalbumins
Finches

Probabilistic white matter atlases of human auditory, basal ganglia, language, precuneus, sensorimotor, visual and visuospatial networks

Figley, T. D., Mortazavi Moghadam, B., Bhullar, N., Kornelsen, J., Courtney, S. M. & Figley, C. R. Jun 19 2017 In : Frontiers in Human Neuroscience. 11, 306

Research output: Research - peer-reviewArticle

Spiral Ganglion
Parietal Lobe
Atlases
Basal Ganglia
Language

Rapid changes in brain aromatase activity in the female quail brain following expression of sexual behaviour

de Bournonville, C., Ball, G. F., Balthazart, J. & Cornil, C. A. Nov 1 2017 In : Journal of Neuroendocrinology. 29, 11, e12542

Research output: Research - peer-reviewArticle

Quail
Aromatase
Sexual Behavior
Brain
Estrogens

Right Hemisphere Grey Matter Volume and Language Functions in Stroke Aphasia

Lukic, S., Barbieri, E., Wang, X., Caplan, D., Kiran, S., Rapp, B., Parrish, T. B. & Thompson, C. K. 2017 In : Neural Plasticity. 2017, 5601509

Research output: Research - peer-reviewArticle

Aphasia
Language
Stroke
Gray Matter
Aptitude
Learning
Inhibition (Psychology)
Cues
Sucrose
Food

Structures of riboswitch RNA reaction states by mix-and-inject XFEL serial crystallography

Stagno, J. R. , Liu, Y. , Bhandari, Y. R. , Conrad, C. E. , Panja, S. , Swain, M. , Fan, L. , Nelson, G. , Li, C. , Wendel, D. R. , White, T. A. , Coe, J. D. , Wiedorn, M. O. , Knoska, J. , Oberthuer, D. , Tuckey, R. A. , Yu, P. , Dyba, M. , Tarasov, S. G. , Weierstall, U. & 18 others Grant, T. D., Schwieters, C. D., Zhang, J., Ferré-D'Amaré, A. R., Fromme, P., Draper, D. E., Liang, M., Hunter, M. S., Boutet, S., Tan, K., Zuo, X., Ji, X., Barty, A., Zatsepin, N. A., Chapman, H. N., Spence, J. C. H., Woodson, S. A. & Wang, Y. X. Jan 12 2017 In : Nature. 541, 7636, p. 242-246 5 p.

Research output: Research - peer-reviewArticle

Riboswitch
Crystallography
Lasers
X-Rays
RNA

Temperature stability of proteins: Analysis of irreversible denaturation using isothermal calorimetry

Schön, A., Clarkson, B. R., Jaime, M. & Freire, E. Nov 1 2017 In : Proteins: Structure, Function and Bioinformatics. 85, 11, p. 2009-2016 8 p.

Research output: Research - peer-reviewArticle

Calorimetry
Protein Stability
Temperature
Denaturation
Proteins

The capture of attention by entirely irrelevant pictures of calorie-dense foods

Cunningham, C. A. & Egeth, H. E. Oct 26 2017 (Accepted/In press) In : Psychonomic Bulletin and Review. p. 1-10 10 p.

Research output: Research - peer-reviewArticle

Food
Energy
Distraction
Distractor
Fat

The Role of Allograph Representations in Font-Invariant Letter Identification

Rothlein, D. & Rapp, B. Apr 3 2017 (Accepted/In press) In : Journal of Experimental Psychology: Human Perception and Performance.

Research output: Research - peer-reviewArticle

Letters
Font
Names
Brain
Research

The value of cognitive neuropsychology: The case of vision research

McCloskey, M. & Chaisilprungraung, T. Jun 27 2017 (Accepted/In press) In : Cognitive Neuropsychology. p. 1-8 8 p.

Research output: Research - peer-reviewArticle

Color Vision Defects
Neuropsychology
Research
Facial Recognition
Cognitive Neuropsychology

The β20-β21 of gp120 is a regulatory switch for HIV-1 Env conformational transitions

Herschhorn, A., Gu, C., Moraca, F., Ma, X., Farrell, M., Smith, A. B., Pancera, M., Kwong, P. D., Schön, A., Freire, E., Abrams, C., Blanchard, S. C., Mothes, W. & Sodroski, J. G. Dec 1 2017 In : Nature Communications. 8, 1, 1049

Research output: Research - peer-reviewArticle

human immunodeficiency virus
switches
Conformations
Switches
HIV-1

Treatment with levetiracetam improves cognition in a ketamine rat model of schizophrenia

Koh, M. T., Shao, Y., Rosenzweig-Lipson, S. & Gallagher, M. Mar 1 2017 (Accepted/In press) In : Schizophrenia Research.

Research output: Research - peer-reviewArticle

etiracetam
Ketamine
Cognition
Schizophrenia
Therapeutics

Wnt5a is essential for hippocampal dendritic maintenance and spatial learning and memory in adult mice

Chen, C. M., Orefice, L. L., Chiu, S. L., LeGates, T. A., Hattar, S., Huganir, R. L., Zhao, H., Xu, B. & Kuruvilla, R. Jan 24 2017 In : Proceedings of the National Academy of Sciences of the United States of America. 114, 4, p. E619-E628

Research output: Research - peer-reviewArticle

Dendrites
Maintenance
Brain
Spatial Learning
Spatial Memory
2016

Abnormal wake/sleep pattern in a novel gain-of-function model of DISC1

Jaaro-Peled, H., Altimus, C., LeGates, T., Cash-Padgett, T., Zoubovsky, S., Hikida, T., Ishizuka, K., Hattar, S., Mongrain, V. & Sawa, A. Nov 1 2016 In : Neuroscience Research. 112, p. 63-69 7 p.

Research output: Research - peer-reviewArticle

Sleep
Genes
Sleep Deprivation
Darkness
Pedigree

Analyzing Single Giant Unilamellar Vesicles with a Slotline-Based RF Nanometer Sensor

Cui, Y., Kenworthy, A. K., Edidin, M., Divan, R., Rosenmann, D. & Wang, P. Apr 1 2016 In : IEEE Transactions on Microwave Theory and Techniques. 64, 4, p. 1339-1347 9 p., 7432040

Research output: Research - peer-reviewArticle

sensors
Sensors
dielectric properties
cells
Dielectric properties

A neural mechanism of cognitive control for resolving conflict between abstract task rules

Sheu, Y. S. & Courtney, S. M. Dec 1 2016 In : Cortex. 85, p. 13-24 12 p.

Research output: Research - peer-reviewArticle

Cues
Conflict (Psychology)
Prefrontal Cortex
Frontal Lobe
Semantics

Antagonism of syringeal androgen receptors reduces the quality of female-preferred male song in canaries

Alward, B. A., Madison, F. N., Gravley, W. T. & Ball, G. F. Sep 1 2016 In : Animal Behaviour. 119, p. 201-212 12 p.

Research output: Research - peer-reviewArticle

androgen
antagonism
social behavior
song
canaries

Architecture of retinal projections to the central circadian pacemaker

Fernandez, D. C., Chang, Y. T., Hattar, S. & Chen, S. K. May 24 2016 In : Proceedings of the National Academy of Sciences of the United States of America. 113, 21, p. 6047-6052 6 p.

Research output: Research - peer-reviewArticle

Suprachiasmatic Nucleus
Retinal Ganglion Cells
Gastrin-Releasing Peptide
Vasoactive Intestinal Peptide
Neurons

Arginine Patch Predicts the RNA Annealing Activity of Hfq from Gram-Negative and Gram-Positive Bacteria

Zheng, A., Panja, S. & Woodson, S. A. Jun 5 2016 In : Journal of Molecular Biology. 428, 11, p. 2259-2264 6 p.

Research output: Research - peer-reviewArticle

Gram-Positive Bacteria
Arginine
RNA
Small Untranslated RNA
Fluorescence Spectrometry

Aromatase inhibition rapidly affects in a reversible manner distinct features of birdsong

Alward, B. A., De Bournonville, C., Chan, T. T., Balthazart, J., Cornil, C. A. & Ball, G. F. Aug 30 2016 In : Scientific Reports. 6, 32344

Research output: Research - peer-reviewArticle

Aromatase
Music
Estrogens
Inhibition (Psychology)
Canaries

A visual circuit uses complementary mechanisms to support transient and sustained pupil constriction

Keenan, W. T., Rupp, A. C., Ross, R. A., Somasundaram, P., Hiriyanna, S., Wu, Z., Badea, T. C., Robinson, P. R., Lowell, B. B. & Hattar, S. S. Sep 26 2016 In : eLife. 5, September2016, e15392

Research output: Research - peer-reviewArticle

Neurotransmitter Agents
Networks (circuits)
Pupil
Constriction
Pituitary Adenylate Cyclase-Activating Polypeptide

Cognitive control during selection and repair in word production

Nozari, N., Freund, M., Breining, B., Rapp, B. & Gordon, B. Apr 12 2016 (Accepted/In press) In : Language, Cognition and Neuroscience. p. 1-18 18 p.

Research output: Research - peer-reviewArticle

Word Production
Repair
Cognitive Control
Semantics
Costs and Cost Analysis