School of Arts and Sciences

Research Output 1967 2020

2020

Cognitive and language performance predicts effects of spelling intervention and tDCS in Primary Progressive Aphasia

de Aguiar, V., Zhao, Y., Ficek, B. N., Webster, K., Rofes, A., Wendt, H., Frangakis, C., Caffo, B., Hillis, A. E., Rapp, B. & Tsapkini, K., Mar 2020, In : Cortex. 124, p. 66-84 19 p.

Research output: Contribution to journalArticle

Primary Progressive Aphasia
Language
Short-Term Memory
Therapeutics
Language Therapy

Spatial language difficulties reflect the structure of intact spatial representation: Evidence from high-functioning autism

Bochynska, A., Vulchanova, M., Vulchanov, V. & Landau, B., Feb 2020, In : Cognitive Psychology. 116, 101249.

Research output: Contribution to journalArticle

Autistic Disorder
autism
Language
Linguistics
language
2019

Aged Rats With Intact Memory Show Distinctive Recruitment in Cortical Regions Relative to Young Adults in a Cue Mismatch Task

Haberman, R. P., Monasterio, A., Branch, A. & Gallagher, M., Jan 1 2019, (Accepted/In press) In : Behavioral Neuroscience.

Research output: Contribution to journalArticle

Cues
Young Adult
Temporal Lobe
Long Evans Rats
Immediate-Early Genes

Aged rats with preserved memory dynamically recruit hippocampal inhibition in a local/global cue mismatch environment

Branch, A., Monasterio, A., Blair, G., Knierim, J., Gallagher, M. & Haberman, R. P., Apr 1 2019, In : Neurobiology of Aging. 76, p. 151-161 11 p.

Research output: Contribution to journalArticle

Cues
Neuronal Plasticity
Young Adult
Social Adjustment
Long Evans Rats

Age-related differences in the structural and effective connectivity of cognitive control: a combined fMRI and DTI study of mental arithmetic

Hinault, T., Larcher, K., Bherer, L., Courtney-Faruqee, S. & Dagher, A., Oct 1 2019, In : Neurobiology of Aging. 82, p. 30-39 10 p.

Research output: Contribution to journalArticle

Short-Term Memory
Young Adult
Magnetic Resonance Imaging
Maintenance
Parietal Lobe

Dissociating task acquisition from expression during learning reveals latent knowledge

Kuchibhotla, K., Hindmarsh Sten, T., Papadoyannis, E. S., Elnozahy, S., Fogelson, K. A., Kumar, R., Boubenec, Y., Holland, P. C., Ostojic, S. & Froemke, R. C., Dec 1 2019, In : Nature communications. 10, 1, 2151.

Research output: Contribution to journalArticle

Open Access
learning
acquisition
Reinforcement
Learning
Animals

Erratum to: A human monoclonal antibody prevents malaria infection by targeting a new site of vulnerability on the parasite (Nature Medicine, (2018), 24, 4, (408-416), 10.1038/nm.4512)

Kisalu, N. K., Idris, A. H., Weidle, C., Flores-Garcia, Y., Flynn, B. J., Sack, B. K., Murphy, S., Schön, A., Freire, E. I., Francica, J. R., Miller, A. B., Gregory, J., March, S., Liao, H. X., Haynes, B. F., Wiehe, K., Trama, A. M., Saunders, K. O., Gladden, M. A., Monroe, A. & 18 others, Bonsignori, M., Kanekiyo, M., Wheatley, A. K., McDermott, A. B., Farney, S. K., Chuang, G. Y., Zhang, B., Kc, N., Chakravarty, S., Kwong, P. D., Sinnis, P., Bhatia, S. N., Kappe, S. H. I., Sim, B. K. L., Hoffman, S. L., Zavala, F. P., Pancera, M. & Seder, R. A., Jan 1 2019, In : Nature Medicine. 25, 1, p. 188-189 2 p.

Research output: Contribution to journalComment/debate

Malaria
Medicine
Parasites
Monoclonal Antibodies
Infection

Evidence for selective adjustments of inhibitory control in a variant of the stop signal task

Xu, K. Z., Mayse, J. D. & Courtney-Faruqee, S., Apr 1 2019, In : Quarterly journal of experimental psychology (2006). 72, 4, p. 818-831 14 p.

Research output: Contribution to journalArticle

Open Access
Social Adjustment
Reaction Time
Aptitude
Negotiating
Learning

High-level Integrative Networks: A Resting-state fMRI Investigation of Reading and Spelling

Ellenblum, G., Purcell, J. J., Song, X. & Rapp, B., Jul 1 2019, In : Journal of cognitive neuroscience. 31, 7, p. 961-977 17 p.

Research output: Contribution to journalArticle

Reading
Magnetic Resonance Imaging
Brain
Research
psychophysics
neurophysiology
Psychophysics
Neurophysiology
psychology

Impaired behavioral and neural representation of scenes in Williams syndrome

Ferrara, K., Landau, B. & Park, S., Dec 2019, In : Cortex. 121, p. 264-276 13 p.

Research output: Contribution to journalArticle

Williams Syndrome
Behavioral Research
Magnetic Resonance Imaging

Occasion Setting

Fraser, K. M. & Holland, P. C., Apr 1 2019, In : Behavioral Neuroscience. 133, 2, p. 145-175 31 p.

Research output: Contribution to journalArticle

Aptitude
Neurobiology
Neurosciences
Learning
Brain

Ramachandran maps for side chains in globular proteins

Rose, G. D., Jan 1 2019, (Accepted/In press) In : Proteins: Structure, Function and Bioinformatics.

Research output: Contribution to journalArticle

Proteins
Conformations
Nucleic Acid Repetitive Sequences
Libraries
Hydrogen
Entorhinal Cortex
Dentate Gyrus
Learning
Temporal Lobe
Optogenetics

Re-learning and remembering in the lesioned brain

Rapp, B. C. & Wiley, R. W., Sep 1 2019, In : Neuropsychologia. 132, 107126.

Research output: Contribution to journalArticle

Learning
Brain
Language
Rehabilitation
Temporal Lobe

Re-learning to be different: Increased neural differentiation supports post-stroke language recovery

Purcell, J. J., Wiley, R. W. & Rapp, B. C., Nov 15 2019, In : NeuroImage. 202, 116145.

Research output: Contribution to journalArticle

Language
Stroke
Learning
Brain
Cognition

Revisiting the Landmark Task as a tool for studying hemispheric specialization: What's really right?

Seydell-Greenwald, A., Pu, S. F., Ferrara, K., Chambers, C. E., Newport, E. L. & Landau, B., Apr 1 2019, In : Neuropsychologia. 127, p. 57-65 9 p.

Research output: Contribution to journalArticle

Cerebral Dominance
Parietal Lobe
Young Adult
Language

Simulation Analyses of tDCS Montages for the Investigation of Dorsal and Ventral Pathways

Bhattacharjee, S., Kashyap, R., Rapp, B. C., Oishi, K., Desmond, J. & Chen, S. H. A., Dec 1 2019, In : Scientific reports. 9, 1, 12178.

Research output: Contribution to journalArticle

Open Access
Electrodes
Reading
Transcranial Direct Current Stimulation
Semantics
Cognition
Open Access
Agraphia
Neuronal Plasticity
Language
Stroke
Occipital Lobe

The use of spelling for variant classification in primary progressive aphasia: Theoretical and practical implications

Neophytou, K., Wiley, R. W., Rapp, B. C. & Tsapkini, K., Oct 1 2019, In : Neuropsychologia. 133, 107157.

Research output: Contribution to journalArticle

Open Access
Primary Progressive Aphasia
Language
Primary Progressive Nonfluent Aphasia
Proxy
Semantics

Unique objects attract attention even when faint

Jeck, D. M., Qin, M., Egeth, H. E. & Niebur, E., Jul 1 2019, In : Vision Research. 160, p. 60-71 12 p.

Research output: Contribution to journalArticle

Malus

What are the threats to successful brain and cognitive aging?

Gallagher, M., Okonkwo, O. C., Resnick, S. M., Jagust, W. J., Benzinger, T. L. S. & Rapp, P. R., Nov 2019, In : Neurobiology of Aging. 83, p. 130-134 5 p.

Research output: Contribution to journalArticle

Aptitude
Brain
Amyloid Plaques
Apolipoproteins E
Amyloid

What are the threats to successful brain and cognitive aging?

Gallagher, M., Okonkwo, O. C., Resnick, S. M., Jagust, W. J., Benzinger, T. L. S. & Rapp, P. R., Jan 1 2019, In : Neurobiology of Aging.

Research output: Contribution to journalArticle

Aptitude
Brain
Amyloid Plaques
Apolipoproteins E
Amyloid

What is life? Part II

Rose, G. D., Jan 1 2019, (Accepted/In press) In : Proteins: Structure, Function and Bioinformatics.

Research output: Contribution to journalArticle

2018

A greater tendency for representation mediated learning in a ketamine mouse model of schizophrenia

Koh, M. T., Ahrens, P. S. & Gallagher, M., Apr 1 2018, In : Behavioral Neuroscience. 132, 2, p. 106-113 8 p.

Research output: Contribution to journalArticle

Ketamine
Schizophrenia
Learning
Association Learning
Lithium Chloride

A human monoclonal antibody prevents malaria infection by targeting a new site of vulnerability on the parasite

Kisalu, N. K., Idris, A. H., Weidle, C., Flores-Garcia, Y., Flynn, B. J., Sack, B. K., Murphy, S., Schön, A., Freire, E. I., Francica, J. R., Miller, A. B., Gregory, J., March, S., Liao, H. X., Haynes, B. F., Wiehe, K., Trama, A. M., Saunders, K. O., Gladden, M. A., Monroe, A. & 18 others, Bonsignori, M., Kanekiyo, M., Wheatley, A. K., McDermott, A. B., Farney, S. K., Chuang, G. Y., Zhang, B., Kc, N., Chakravarty, S., Kwong, P. D., Sinnis, P., Bhatia, S. N., Kappe, S. H. I., Sim, B. K. L., Hoffman, S. L., Zavala, F. P., Pancera, M. & Seder, R. A., May 1 2018, In : Nature Medicine. 24, 4, p. 408-416 9 p.

Research output: Contribution to journalArticle

Malaria
Parasites
Vaccines
Monoclonal Antibodies
Epitopes

Bioinspired supramolecular engineering of self-assembling immunofibers for high affinity binding of immunoglobulin G

Li, Y., Lock, L. L., Wang, Y., Ou, S. H., Stern, D., Schön, A., Freire, E. I., Xu, X., Ghose, S., Li, Z. J. & Cui, H., Jan 1 2018, (Accepted/In press) In : Biomaterials.

Research output: Contribution to journalArticle

Peptides
Immunoglobulin G
Epitopes
Amphiphiles
Calorimetry

Cortical thickness atrophy in the transentorhinal cortex in mild cognitive impairment

for the Alzheimer's Disease Neuroimaging Initiative, Jan 1 2018, (Accepted/In press) In : NeuroImage: Clinical. 1 p.

Research output: Contribution to journalArticle

Entorhinal Cortex
Atrophy
Temporal Lobe
Discriminant Analysis
Amygdala
Primary Progressive Aphasia
Deep Brain Stimulation
Randomized Controlled Trials
Primary Progressive Nonfluent Aphasia
Language

Enhanced postsynaptic inhibitory strength in hippocampal principal cells in high-performing aged rats

Tran, T., Gallagher, M. & Kirkwood, A., Oct 1 2018, In : Neurobiology of Aging. 70, p. 92-101 10 p.

Research output: Contribution to journalArticle

Up-Regulation
Pyramidal Cells
Dentate Gyrus
Synapses
Hippocampus

Erratum: Publisher Correction: The β20-β21 of gp120 is a regulatory switch for HIV-1 Env conformational transitions (Nature communications (2017) 8 1 (1049))

Herschhorn, A., Gu, C., Moraca, F., Ma, X., Farrell, M., Smith, A. B., Pancera, M., Kwong, P. D., Schön, A., Freire, E. I., Abrams, C., Blanchard, S. C., Mothes, W. & Sodroski, J. G., Jan 8 2018, In : Nature Communications. 9, 1, 1 p.

Research output: Contribution to journalComment/debate

document markup languages
human immunodeficiency virus
HTML
HIV-1
switches

From complexity to distinctiveness: The effect of expertise on letter perception

Wiley, R. W. & Rapp, B. C., Jan 1 2018, (Accepted/In press) In : Psychonomic Bulletin and Review.

Research output: Contribution to journalArticle

Task Performance and Analysis
Language
Learning
Letters
Expertise

Homi Bhabha master builder of nuclear India

Leslie, S. W. & Chowdhury, I., Sep 1 2018, Physics Today, 71, 9, p. 48-55 8 p.

Research output: Contribution to specialist publicationArticle

India

Isothermal calorimetry of a monoclonal antibody using a conventional differential scanning calorimeter

Clarkson, B. R. & Freire, E. I., Oct 1 2018, In : Analytical Biochemistry. 558, p. 50-52 3 p.

Research output: Contribution to journalArticle

Calorimetry
Calorimeters
Denaturation
Monoclonal Antibodies
Scanning

Language processing from the perspective of electrical stimulation mapping

Rofes, A., Mandonnet, E., de Aguiar, V., Rapp, B. C., Tsapkini, K. & Miceli, G., Jul 12 2018, (Accepted/In press) In : Cognitive Neuropsychology. p. 1-23 23 p.

Research output: Contribution to journalArticle

Electric Stimulation
Language
Cognition
Brain Neoplasms
Stroke
Learning
learning
Semantics
semantics
Cognitive Systems

Learning Simple Spatial Terms: Core and More

Landau, B., Jan 1 2018, (Accepted/In press) In : Topics in Cognitive Science.

Research output: Contribution to journalArticle

Linguistics
Semantics
learning
Industry
Learning

Local response heterogeneity indexes experience-based neural differentiation in reading

Purcell, J. J. & Rapp, B. C., Dec 1 2018, In : NeuroImage. 183, p. 200-211 12 p.

Research output: Contribution to journalArticle

Reading
Aptitude
Language
Magnetic Resonance Imaging
Learning

Long term stability of a HIV-1 neutralizing monoclonal antibody using isothermal calorimetry

Clarkson, B. R., Chaudhuri, R., Schön, A., Cooper, J. W., Kueltzo, L. & Freire, E. I., Aug 1 2018, In : Analytical Biochemistry. 554, p. 61-69 9 p.

Research output: Contribution to journalArticle

Calorimetry
Denaturation
Neutralizing Antibodies
HIV-1
Monoclonal Antibodies

SOSIP changes affect human immunodeficiency virus type 1 envelope glycoprotein conformation and CD4 engagement

Alsahafi, N., Anand, S. P., Castillo-Menendez, L., Verly, M. M., Medjahed, H., Prévost, J., Herschhorn, A., Richard, J., Schön, A., Melillo, B., Freire, E. I., Smith, A. B., Sodroski, J. & Finzia, A., Oct 1 2018, In : Journal of Virology. 92, 19, e01080.

Research output: Contribution to journalArticle

Human immunodeficiency virus 1
env Gene Products
HIV-1
glycoproteins
Glycoproteins

Statistical analysis in Small-N Designs: using linear mixed-effects modeling for evaluating intervention effectiveness

Wiley, R. W. & Rapp, B. C., Mar 23 2018, (Accepted/In press) In : Aphasiology. p. 1-30 30 p.

Research output: Contribution to journalArticle

statistical analysis
Mathematical Computing
Agraphia
Longitudinal Studies
Appointments and Schedules

The power of negative thinking: Paradoxical but effective ignoring of salient-but-irrelevant stimuli with a spatial cue

Chang, S., Cunningham, C. A. & Egeth, H. E., Jan 1 2018, (Accepted/In press) In : Visual Cognition.

Research output: Contribution to journalArticle

Cues
Color
Reaction Time
Pessimism
Power (Psychology)

Value-driven attentional capture is modulated by the contents of working memory: An EEG study

Hinault, T., Blacker, K. J., Gormley, M., Anderson, B. A. & Courtney-Faruqee, S., Jan 1 2018, (Accepted/In press) In : Cognitive, Affective and Behavioral Neuroscience.

Research output: Contribution to journalArticle

Short-Term Memory
Electroencephalography
Color
Reward
Electrodes

“Suburban Warriors”: The Blue-Collar and Blue-Sky Communities of Southern California’s Aerospace Industry

Karafantis, L. & Leslie, S. W., Jan 1 2018, (Accepted/In press) In : Journal of Planning History.

Research output: Contribution to journalArticle

edge city
aerospace industry
Cold War
labor division
industry
2017

Acidic C-terminal domains autoregulate the RNA chaperone Hfq

Santiago-Frangos, A., Jeliazkov, J. R., Gray, J. J. & Woodson, S. A., Aug 9 2017, In : eLife. 6, e27049.

Research output: Contribution to journalArticle

RNA
Escherichia coli
Bacterial RNA
Peptide Nucleic Acids
Messenger RNA

Anatomical and Behavioral Investigation of C1ql3 in the Mouse Suprachiasmatic Nucleus

Chew, K. S., Fernandez, D. C., Hattar, S., Südhof, T. C. & Martinelli, D. C., Jun 1 2017, In : Journal of Biological Rhythms. 32, 3, p. 222-236 15 p.

Research output: Contribution to journalArticle

Suprachiasmatic Nucleus
Synapses
Physiological Phenomena
Photoperiod
Circadian Rhythm

An LHX1-Regulated Transcriptional Network Controls Sleep/Wake Coupling and Thermal Resistance of the Central Circadian Clockworks

Bedont, J. L., LeGates, T. A., Buhr, E., Bathini, A., Ling, J. P., Bell, B., Wu, M., Wong, P. C., Van Gelder, R. N., Mongrain, V., Hattar, S. & Blackshaw, S., Jan 9 2017, In : Current Biology. 27, 1, p. 128-136 9 p.

Research output: Contribution to journalArticle

vasoactive intestinal peptide
Suprachiasmatic Nucleus
Gene Regulatory Networks
Vasoactive Intestinal Peptide
sleep

A novel lipoate attachment enzyme is shared by Plasmodium and Chlamydia species

Afanador, G. A., Guerra, A. J., Swift, R. P., Rodriguez, R. E., Bartee, D., Matthews, K. A., Schön, A., Freire, E. I., Meyers, C. L. & Prigge, S. T., Nov 1 2017, In : Molecular Microbiology. 106, 3, p. 439-451 13 p.

Research output: Contribution to journalArticle

Plasmodium
Chlamydia
Lipoylation
Oxidation-Reduction
Enzymes

A subset of iprgcs regulates both maturation of the circadian clock and segregation of retinogeniculate projections in mice

Chew, K. S., Renna, J. M., McNeill, D. S., Fernandez, D. C., Keenan, W. T., Thomsen, M. B., Ecker, J. L., Loevinsohn, G. S., Vandunk, C., Vicarel, D. C., Tufford, A., Weng, S., Gray, P. A., Cayouette, M., Herzog, E. D., Zhao, H., Berson, D. M. & Hattar, S., Jun 15 2017, In : eLife. 6, e22861.

Research output: Contribution to journalArticle

Circadian Clocks
Retinal Ganglion Cells
Clocks
Light
Networks (circuits)

Attentive pointing in natural scenes correlates with other measures of attention

Jeck, D. M., Qin, M., Egeth, H. E. & Niebur, E., Jun 1 2017, In : Vision Research. 135, p. 54-64 11 p.

Research output: Contribution to journalArticle

Fingers
Self Report
Tablets