Johns Hopkins University

Research Output 1914 2019

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Conference contribution
2019

A new atlas pre-selection approach for multi-atlas based brain segmentation

Li, H., Ye, C., Ma, J., Mori, S. & Ma, H. T., Jan 1 2019, International Conference on Biomedical and Health Informatics - ICBHI 2015. Zhang, Y-T., Carvalho, P. & Magjarevic, R. (eds.). Springer Verlag, Vol. 64. p. 153-154 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Brain

Challenges of disposition decision making for pediatric trauma patients in the emergency department

Hose, B. Z., Carayon, P., Hoonakker, P., Wooldridge, A., Brazelton, T., Dean, S., Eithun, B., Kelly, M., Kohler, J., Ross, J., Rusy, D. & Gurses, A., Jan 1 2019, Proceedings of the 20th Congress of the International Ergonomics Association (IEA 2018) - Volume I: Healthcare Ergonomics. Bagnara, S., Fujita, Y., Tartaglia, R., Albolino, S. & Alexander, T. (eds.). Springer Verlag, p. 339-345 7 p. (Advances in Intelligent Systems and Computing; vol. 818).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Pediatrics
Decision making
Surgery

Characterizing Design Patterns of EHR-Driven Phenotype Extraction Algorithms

Zhong, Y., Rasmussen, L., Deng, Y., Pacheco, J., Smith, M., Starren, J., Wei, W. Q., Speltz, P., Denny, J., Walton, N., Hripcsak, G., Chute, C. & Luo, Y., Jan 21 2019, Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018. Schmidt, H., Griol, D., Wang, H., Baumbach, J., Zheng, H., Callejas, Z., Hu, X., Dickerson, J. & Zhang, L. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 1143-1146 4 p. 8621240. (Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Phenotype
Electronic Health Records
Proxy
Macros
Learning systems

Control of Chemotaxis Through Absolute Concentration Robustness

Bhattacharya, S., Biswas, D., Enciso, G. A. & Iglesias, P. A., Jan 18 2019, 2018 IEEE Conference on Decision and Control, CDC 2018. Institute of Electrical and Electronics Engineers Inc., p. 4360-4365 6 p. 8619195. (Proceedings of the IEEE Conference on Decision and Control; vol. 2018-December).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Chemotaxis
Robustness
Pathogens
Cell
Gradient

Creating prognostic systems by the mann-whitney parameter

Wang, H., Hueman, M. T., Pan, Q., Henson, D., Schwartz, A., Sheng, L. & Chen, D., Feb 21 2019, Proceedings - 2018 IEEE/ACM International Conference on Connected Health: Applications, Systems and Engineering Technologies, CHASE 2018. Institute of Electrical and Electronics Engineers Inc., p. 33-39 7 p. (Proceedings - 2018 IEEE/ACM International Conference on Connected Health: Applications, Systems and Engineering Technologies, CHASE 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

SEER Program
Epidemiology
National Cancer Institute (U.S.)
Neoplasm Staging
Cluster Analysis

Design of a system of analysis of bioimpedance in children

Alvarado-Diaz, W., Meneses-Claudio, B., Romero-Alva, V., Minaya-Varas, O., Roman-Gonzalez, A. & Zimic, M., Jan 10 2019, IEEE ICA-ACCA 2018 - IEEE International Conference on Automation/23rd Congress of the Chilean Association of Automatic Control: Towards an Industry 4.0 - Proceedings. Munoz, C., Lefranc, G., Fernandez-Fernandez, M., Rubio, E. & Duran-Faundez, C. (eds.). Institute of Electrical and Electronics Engineers Inc., 8609844. (IEEE ICA-ACCA 2018 - IEEE International Conference on Automation/23rd Congress of the Chilean Association of Automatic Control: Towards an Industry 4.0 - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Oils and fats
Impedance
fats
impedance
human body

EEG Signals processing two state discrimination using self-organizing maps

Diaz-Sotelo, W. J., Roman-Gonzalez, A., Vargas-Cuentas, N. I., Meneses-Claudio, B. & Zimic, M., Jan 10 2019, IEEE ICA-ACCA 2018 - IEEE International Conference on Automation/23rd Congress of the Chilean Association of Automatic Control: Towards an Industry 4.0 - Proceedings. Munoz, C., Lefranc, G., Fernandez-Fernandez, M., Rubio, E. & Duran-Faundez, C. (eds.). Institute of Electrical and Electronics Engineers Inc., 8609745. (IEEE ICA-ACCA 2018 - IEEE International Conference on Automation/23rd Congress of the Chilean Association of Automatic Control: Towards an Industry 4.0 - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

organizing
Self organizing maps
Self-organizing Map
Discrimination
discrimination

Evaluating cost-effectiveness of treatment options for diabetes patients using system dynamics modeling

Liu, S., Liu, G., Bishai, D. M., Xu, J. C., Xue, H. & Wang, Y., Jan 31 2019, WSC 2018 - 2018 Winter Simulation Conference: Simulation for a Noble Cause. Institute of Electrical and Electronics Engineers Inc., p. 2577-2588 12 p. 8632264. (Proceedings - Winter Simulation Conference; vol. 2018-December).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Cost-effectiveness
Diabetes
Dynamic Modeling
Cost effectiveness
Medical problems

Glaucoma Monitoring Using Manifold Learning and Unsupervised Clustering

Yousefi, S., Elze, T., Pasquale, L. R. & Boland, M., Feb 4 2019, 2018 International Conference on Image and Vision Computing New Zealand, IVCNZ 2018. IEEE Computer Society, 8634733. (International Conference Image and Vision Computing New Zealand; vol. 2018-November).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Monitoring
Principal component analysis
Learning algorithms
Artificial intelligence
Visualization

Method for the automatic segmentation of the palpebral conjunctiva using image processing

Delgado-Rivera, G., Roman-Gonzalez, A., Alva-Mantari, A., Saldivar-Espinoza, B., Zimic, M., Barrientos-Porras, F. & Salguedo-Bohorquez, M., Jan 10 2019, IEEE ICA-ACCA 2018 - IEEE International Conference on Automation/23rd Congress of the Chilean Association of Automatic Control: Towards an Industry 4.0 - Proceedings. Munoz, C., Lefranc, G., Fernandez-Fernandez, M., Rubio, E. & Duran-Faundez, C. (eds.). Institute of Electrical and Electronics Engineers Inc., 8609744. (IEEE ICA-ACCA 2018 - IEEE International Conference on Automation/23rd Congress of the Chilean Association of Automatic Control: Towards an Industry 4.0 - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

conjunctiva
anemias
image processing
Image Processing
Image processing

MIMoSA: An Approach to automatically segment T2 hyperintense and T1 hypointense lesions in multiple sclerosis

Valcarcel, A. M., Linn, K. A., Khalid, F., Vandekar, S. N., Tauhid, S., Satterthwaite, T. D., Muschelli, J., Bakshi, R. & Shinohara, R. T., Jan 1 2019, Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries - 4th International Workshop, BrainLes 2018, Held in Conjunction with MICCAI 2018, Revised Selected Papers. Reyes, M., Crimi, A., van Walsum, T., Keyvan, F., Bakas, S. & Kuijf, H. (eds.). Springer Verlag, p. 47-56 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11383 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Multiple Sclerosis
Magnetic Resonance Imaging
Magnetic resonance imaging
Segmentation
Dice

Semantic stereo for incidental satellite images

Bosch, M., Foster, K., Christie, G., Wang, S., Hager, G. & Brown, M., Mar 4 2019, Proceedings - 2019 IEEE Winter Conference on Applications of Computer Vision, WACV 2019. Institute of Electrical and Electronics Engineers Inc., p. 1524-1532 9 p. 8659180. (Proceedings - 2019 IEEE Winter Conference on Applications of Computer Vision, WACV 2019).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Semantics
Satellites
Binoculars
Labels
Neural networks

Semi-supervised 3D abdominal multi-organ segmentation via deep multi-planar co-training

Zhou, Y., Wang, Y., Tang, P., Bai, S., Shen, W., Fishman, E. K. & Yuille, A., Mar 4 2019, Proceedings - 2019 IEEE Winter Conference on Applications of Computer Vision, WACV 2019. Institute of Electrical and Electronics Engineers Inc., p. 121-140 20 p. 8658899. (Proceedings - 2019 IEEE Winter Conference on Applications of Computer Vision, WACV 2019).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Labels
Computerized tomography
Supervised learning
Image segmentation
Learning algorithms

Synthesizing attributes with unreal engine for fine-grained activity analysis

Kim, T. S., Peven, M., Qiu, W., Yuille, A. & Hager, G., Feb 8 2019, Proceedings - 2019 IEEE Winter Conference on Applications of Computer Vision Workshops, WACVW 2019. Institute of Electrical and Electronics Engineers Inc., p. 35-37 3 p. 8638315. (Proceedings - 2019 IEEE Winter Conference on Applications of Computer Vision Workshops, WACVW 2019).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Labels
Railroad cars
Engines
Masks
Classifiers

Things falling through the cracks: Information loss during pediatric trauma care transitions

Hoonakker, P., Wooldridge, A., Hose, B. Z., Carayon, P., Eithun, B., Brazelton, T., Dean, S., Kelly, M., Kohler, J., Ross, J., Rusy, D. & Gurses, A., Jan 1 2019, Proceedings of the 20th Congress of the International Ergonomics Association (IEA 2018) - Volume I: Healthcare Ergonomics. Bagnara, S., Fujita, Y., Tartaglia, R., Albolino, S. & Alexander, T. (eds.). Springer Verlag, p. 479-488 10 p. (Advances in Intelligent Systems and Computing; vol. 818).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Pediatrics
Cracks
Operating rooms
Intensive care units
Surgery

Toward computer vision systems that understand real-world assembly processes

Jones, J. D., Hager, G. & Khudanpur, S., Mar 4 2019, Proceedings - 2019 IEEE Winter Conference on Applications of Computer Vision, WACV 2019. Institute of Electrical and Electronics Engineers Inc., p. 426-434 9 p. 8659114. (Proceedings - 2019 IEEE Winter Conference on Applications of Computer Vision, WACV 2019).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Computer vision

Weak Mutual Information between Functional Domains in Schizophrenia

Salman, M. S., Vergara, V. M., Damaraju, E. & Calhoun, V. D., Feb 19 2019, Conference Record of the 52nd Asilomar Conference on Signals, Systems and Computers, ACSSC 2018. Matthews, M. B. (ed.). IEEE Computer Society, p. 1362-1366 5 p. 8645233. (Conference Record - Asilomar Conference on Signals, Systems and Computers; vol. 2018-October).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Brain
Entropy
Linear regression
Magnetic Resonance Imaging
2018

2D Modeling and Correction of Fan-Beam Scan Geometry in OCT

Chen, M., Gee, J. C., Prince, J. L. & Aguirre, G. K., Jan 1 2018, Computational Pathology and Ophthalmic Medical Image Analysis - First International Workshop, COMPAY 2018, and 5th International Workshop, OMIA 2018, Held in Conjunction with MICCAI 2018, Proceedings. Taylor, Z., Bogunovic, H., Snead, D., Garvin, M. K., Chen, X. J., Ciompi, F., Xu, Y., Maier-Hein, L., Veta, M., Trucco, E., Stoyanov, D., Rajpoot, N., van der Laak, J., Martel, A. & McKenna, S. (eds.). Springer Verlag, p. 328-335 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11039 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Fans
Geometry
Modeling
Retina
Landmarks

3D cell nuclear morphology: Microscopy imaging dataset and voxel-based morphometry classification results

Kalinin, A. A., Allyn-Feuer, A., Ade, A., Fon, G. V., Meixner, W., Dilworth, D., De Wet, J. R., Higgins, G. A., Zheng, G., Creekmore, A., Wiley, J. W., Verdone, J. E., Veltri, R. W., Pienta, K., Coffey, D. S., Athey, B. D. & Dinov, I. D., Dec 13 2018, Proceedings - 2018 IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops, CVPRW 2018. IEEE Computer Society, Vol. 2018-June. p. 2353-2361 9 p. 8575476

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Microscopic examination
Imaging techniques
Cells
Chemical analysis

A 3D coarse-to-fine framework for volumetric medical image segmentation

Zhu, Z., Xia, Y., Shen, W., Fishman, E. K. & Yuille, A., Oct 12 2018, Proceedings - 2018 International Conference on 3D Vision, 3DV 2018. Institute of Electrical and Electronics Engineers Inc., p. 682-690 9 p. 8491021

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Image segmentation
Neural networks
Experiments
Deep neural networks

A biomechanical and thermal analysis for bone augmentation of the proximal femur

Farvardin, A., Nejad, M. B., Pozin, M. & Armand, M., Jan 1 2018, Biomedical and Biotechnology Engineering. American Society of Mechanical Engineers (ASME), Vol. 3.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Thermoanalysis
Bone
Bone cement
Temperature
Experiments

A computational framework for complementary situational awareness (CSA) in surgical assistant robots

Chalasani, P., Deguet, A., Kazanzides, P. & Taylor, R. H., Apr 2 2018, Proceedings - 2nd IEEE International Conference on Robotic Computing, IRC 2018. Institute of Electrical and Electronics Engineers Inc., Vol. 2018-January. p. 9-16 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Situational Awareness
Minimally Invasive Surgery
Surgery
Anatomy
Robot

A Convex Optimization Framework for Constrained Concurrent Motion Control of a Hybrid Redundant Surgical System

Alambeigi, F., Sefati, S. & Armand, M., Aug 9 2018, 2018 Annual American Control Conference, ACC 2018. Institute of Electrical and Electronics Engineers Inc., Vol. 2018-June. p. 1158-1165 8 p. 8430983

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Convex optimization
Motion control
Redundancy
Robotic arms
Degrees of freedom (mechanics)

Adaptive closed-loop bladder neuromodulation

Peh, W. Y. X., Raczkowska, M. N., Teh, Y., Alam, M., Thakor, N. V. & Yen, S. C., Mar 23 2018, 2017 IEEE Biomedical Circuits and Systems Conference, BioCAS 2017 - Proceedings. Institute of Electrical and Electronics Engineers Inc., Vol. 2018-January. p. 1-4 4 p. 8325202

Research output: Chapter in Book/Report/Conference proceedingConference contribution

bladder
urination
Neural prostheses
urine
Rats

A deep learning based anti-aliasing self super-resolution algorithm for MRI

Zhao, C., Carass, A., Dewey, B. E., Woo, J., Oh, J., Calabresi, P., Reich, D. S., Sati, P., Pham, D. L. & Prince, J. L., Jan 1 2018, Medical Image Computing and Computer Assisted Intervention – MICCAI 2018 - 21st International Conference, 2018, Proceedings. Schnabel, J. A., Davatzikos, C., Alberola-López, C., Fichtinger, G. & Frangi, A. F. (eds.). Springer Verlag, p. 100-108 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11070 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Anti-aliasing
Aliasing
Super-resolution
Magnetic resonance
Magnetic resonance imaging

Advanced image registration and reconstruction using the O-Arm system: Dose reduction, image quality, and guidance using known-component models

Uneri, A., Zhang, X., Stayman, J. W., Helm, P., Osgood, G., Theodore, N. & Siewerdsen, J., Jan 1 2018, Medical Imaging 2018: Image-Guided Procedures, Robotic Interventions, and Modeling. SPIE, Vol. 10576. 105761G

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Computer-Assisted Image Processing
Image registration
Image reconstruction
Cadaver
Image quality

Advancements in data-driven respiratory motion extraction methods for clinical list-mode 18F-FDG PET datasets acquired from a commercial PET scanner

Lee, T-S., Wang, J., Xu, J., Olivier, P., Perkins, A. E., Tung, C. H. & Tsui, B., Nov 12 2018, 2017 IEEE Nuclear Science Symposium and Medical Imaging Conference, NSS/MIC 2017 - Conference Proceedings. Institute of Electrical and Electronics Engineers Inc., 8533107

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Fluorodeoxyglucose F18
lists
scanners
Liver
Motion compensation

Adversarial deep structured nets for mass segmentation from mammograms

Zhu, W., Xiang, X., Tran, T. D., Hager, G. & Xie, X., May 23 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE Computer Society, Vol. 2018-April. p. 847-850 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Pixels
Breast
Learning
Datasets

A general CT reconstruction algorithm for model-based material decomposition

Tilley, S., Zbijewski, W., Siewerdsen, J. & Stayman, J. W., Jan 1 2018, Medical Imaging 2018: Physics of Medical Imaging. SPIE, Vol. 10573. 105731E

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Decomposition
decomposition
Domain decomposition methods
Calcium
Water

A generative-discriminative basis learning framework to predict clinical severity from resting state functional MRI data

D’Souza, N. S., Nebel, M. B., Wymbs, N., Mostofsky, S. H. & Venkataraman, A., Jan 1 2018, Medical Image Computing and Computer Assisted Intervention – MICCAI 2018 - 21st International Conference, 2018, Proceedings. Frangi, A. F., Davatzikos, C., Fichtinger, G., Alberola-López, C. & Schnabel, J. A. (eds.). Springer Verlag, p. 163-171 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11072 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Functional Magnetic Resonance Imaging
Correlation Matrix
Predict
Matrix Factorization
Nonlinear Regression

A hybrid approach for incorporating deep visual features and side channel information with applications to AMD detection

Horta, A., Joshi, N., Pekala, M., Pacheco, K. D., Kong, J., Bressler, N. M., Freund, D. E. & Burlina, P., Jan 16 2018, Proceedings - 16th IEEE International Conference on Machine Learning and Applications, ICMLA 2017. Institute of Electrical and Electronics Engineers Inc., Vol. 2018-January. p. 716-720 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Image analysis
Health

A Mixed-Reality Training Environment for Upper Limb Prosthesis Control

Sharma, A., Hunt, C. L., Maheshwari, A., Osborn, L., Levay, G., Kaliki, R. R., Soares, A. B. & Thakor, N. V., Dec 20 2018, 2018 IEEE Biomedical Circuits and Systems Conference, BioCAS 2018 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 8584739

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Artificial Limbs
Touch
limbs
Upper Extremity
proprioception

A novel filtering approach for 3D harmonic phase analysis of tagged MRI

Wang, X., Stone, M. L., Prince, J. L. & Gomez, A., Jan 1 2018, Medical Imaging 2018: Image Processing. Angelini, E. D., Angelini, E. D. & Landman, B. A. (eds.). SPIE, Vol. 10574. 1057414

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Benchmarking
Magnetic resonance
magnetic resonance
High pass filters
Magnetic Resonance Imaging

A novel method for epileptic seizure detection using coupled hidden markov models

Craley, J., Johnson, E. & Venkataraman, A., Jan 1 2018, Medical Image Computing and Computer Assisted Intervention – MICCAI 2018 - 21st International Conference, 2018, Proceedings. Frangi, A. F., Davatzikos, C., Fichtinger, G., Alberola-López, C. & Schnabel, J. A. (eds.). Springer Verlag, p. 482-489 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11072 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Hidden Markov models
Electroencephalography
Markov Model
Epilepsy
Cross-validation

A portable thermal imaging device as a feedback system for breast cancer treatment

Hoffer, O. A., Ben-David, M. A., Katz, E., Sholomov, M., Kelson, I. & Gannot, I., Jan 1 2018, Optical Fibers and Sensors for Medical Diagnostics and Treatment Applications XVIII. Gannot, I. & Gannot, I. (eds.). SPIE, 104880T. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10488).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Oncology
Infrared imaging
breast
Tumors
Hot Temperature

Assessment of Spinal Cord Injury via Sparse Modeling of Somatosensory Evoked Potential Signals

Mir, H., Al-Nashash, H., Kortelainen, J. & All, A. H., Aug 1 2018, AMS 2017 - Asia Modelling Symposium 2017 and 11th International Conference on Mathematical Modelling and Computer Simulation. Institute of Electrical and Electronics Engineers Inc., p. 13-17 5 p. 8424281

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Bioelectric potentials
Pathway
Modeling
Sparse Representation

A statistical model for image registration performance: Effect of tissue deformation

Ketcha, M. D., De Silva, T., Han, R., Uneri, A., Jacobson, M. W., Vogt, S., Kleinszig, G. & Siewerdsen, J., Jan 1 2018, Medical Imaging 2018: Image Processing. SPIE, Vol. 10574. 105740W

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Image registration
Statistical Models
clutter
Tissue
Noise

A Unified Framework for Multi-view Multi-class Object Pose Estimation

Li, C., Bai, J. & Hager, G., Jan 1 2018, Computer Vision – ECCV 2018 - 15th European Conference, 2018, Proceedings. Weiss, Y., Ferrari, V., Sminchisescu, C. & Hebert, M. (eds.). Springer Verlag, p. 263-281 19 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11220 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Pose Estimation
Multi-class
Masks
Fusion reactions
Neural networks

Automated Tracking System for Identification of Tagged Mice for Automatic Social Behavior Analysis

Marcuccio, F., Savonenko, A. & Etienne-Cummings, R., Dec 20 2018, 2018 IEEE Biomedical Circuits and Systems Conference, BioCAS 2018 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 8584712

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Social Behavior
mice
Monitoring
Standardization
phenotype

Automatic definition of surgical trajectories and acceptance window in pelvic trauma surgery using deformable registration

Han, R., Ramsay, B., De Silva, T., Goerres, J., Uneri, A., Ketcha, M., Jacobson, M., Sheth, N., Vogt, S., Kleinszig, G., Osgood, G. & Siewerdsen, J., Jan 1 2018, Medical Imaging 2018: Image-Guided Procedures, Robotic Interventions, and Modeling. SPIE, Vol. 10576. 105761N

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Atlases
surgery
acceptability
Surgery
Trajectories

Automatic outlier detection using hidden Markov model for cerebellar lobule segmentation

Zuo, L., Carass, A., Han, S. & Prince, J. L., Jan 1 2018, Medical Imaging 2018: Biomedical Applications in Molecular, Structural, and Functional Imaging. Gimi, B. & Krol, A. (eds.). SPIE, Vol. 10578. 105780D

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Hidden Markov models
cerebellum
delineation
Cerebellum
Image classification

Automating Interictal Spike Detection: Revisiting A Simple Threshold Rule

Palepu, A., Premanathan, S., Azhar, F., Vendrame, M., Loddenkemper, T., Reinsberger, C., Kreiman, G., Parkerson, K. A., Sarma, S. & Anderson, W. S., Oct 26 2018, 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2018. Institute of Electrical and Electronics Engineers Inc., Vol. 2018-July. p. 299-302 4 p. 8512244

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Electroencephalography
Seizures
Epilepsy
Neurophysiology
Detectors

Batteryless Pelvic Nerve Direct Modulation for Bladder Voding Using an Active Neural Clip

Lee, S., Xian Peh, W. Y., Ho, J. S., Thakor, N. V., Yen, S. C. & Lee, C., Dec 3 2018, NEMS 2018 - 13th Annual IEEE International Conference on Nano/Micro Engineered and Molecular Systems. Institute of Electrical and Electronics Engineers Inc., p. 452-455 4 p. 8556942

Research output: Chapter in Book/Report/Conference proceedingConference contribution

clips
bladder
nerves
Rats
Modulation

Brain imaging for neural tissue health assessment

Blodgett, D., Bar-Kochba, E., Criss, A., Criss, T., Harper, J., Hwang, G., Lau, C., Rodriguez, C., Renjifo, C., Scholl, C. A., Lefebvre, A. & Mirski, M. A., Jan 1 2018, Micro- and Nanotechnology Sensors, Systems, and Applications X. SPIE, Vol. 10639. 106391G

Research output: Chapter in Book/Report/Conference proceedingConference contribution

health
brain
Brain
Health
Imaging

Bridging the Gap Between 2D and 3D Organ Segmentation with Volumetric Fusion Net

Xia, Y., Xie, L., Liu, F., Zhu, Z., Fishman, E. K. & Yuille, A. L., Jan 1 2018, Medical Image Computing and Computer Assisted Intervention – MICCAI 2018 - 21st International Conference, 2018, Proceedings. Frangi, A. F., Fichtinger, G., Schnabel, J. A., Alberola-López, C. & Davatzikos, C. (eds.). Springer Verlag, p. 445-453 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11073 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Fusion
Fusion reactions
Segmentation
Electric fuses
Augmentation

Changepoint analysis of putamen and thalamus subregions in premanifest huntington's disease

Tan, X., Ross, C. A., Miller, M. & Tang, X., May 23 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE Computer Society, Vol. 2018-April. p. 531-535 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Putamen
Huntington Disease
Thalamus
Aptitude
Brain Diseases

Classifying brain activities in perception of shapeanalogous english letters based on EEG signal

Bose, R., Goh, S. K., Wong, K. F., Thakor, N. V., Bezerianos, A. & Li, J., Dec 26 2018, Proceedings - 2018 International Conference on Cyberworlds, CW 2018. Sourin, A., Sourina, O., Erdt, M. & Rosenberger, C. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 184-190 7 p. 8590038. (Proceedings - 2018 International Conference on Cyberworlds, CW 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

English letters
Electroencephalography
Brain
Classifiers
Classifier

Closing the Calibration Loop: An Inside-Out-Tracking Paradigm for Augmented Reality in Orthopedic Surgery

Hajek, J., Unberath, M., Fotouhi, J., Bier, B., Lee, S. C., Osgood, G., Maier, A., Armand, M. & Navab, N., Jan 1 2018, Medical Image Computing and Computer Assisted Intervention – MICCAI 2018 - 21st International Conference, 2018, Proceedings. Frangi, A. F., Fichtinger, G., Schnabel, J. A., Alberola-López, C. & Davatzikos, C. (eds.). Springer Verlag, p. 299-306 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11073 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Augmented reality
Augmented Reality
Orthopedics
Surgery
Calibration

Clustered iterative sub-Atlas registration for improved deformable registration using statistical shape models

Ramsay, B., De Silva, T., Han, R., Ketcha, M., Uneri, A., Goerres, J., Sheth, N., Jacobson, M., Vogt, S., Kleinszig, G., Osgood, G. & Siewerdsen, J., Jan 1 2018, Medical Imaging 2018: Image-Guided Procedures, Robotic Interventions, and Modeling. SPIE, Vol. 10576. 105760C

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Atlases
Statistical Models
pelvis
annotations
orthopedics

Cochlear vibrations in mice with altered stereociliary mechanics

Dewey, J. B., Xia, A., Raphael, P. D., Mueller, U., Belyantseva, I. A., Applegate, B. E. & Oghalai, J. S., May 31 2018, To the Ear and Back Again - Advances in Auditory Biophysics: Proceedings of the 13th Mechanics of Hearing Workshop. American Institute of Physics Inc., Vol. 1965. 080003

Research output: Chapter in Book/Report/Conference proceedingConference contribution

mice
vibration
hair
partitions
degeneration